EBG00000313339 - n.3000G>T


Drug resistance types
64 Sensitive 3 RR-TB 7 HR-TB 9 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 11 Other
lineage Counts
lineage Count
lineage4.8 4
lineage2.2.1 13
lineage4.4.1.2 2
lineage4.9 13
lineage1.1.1 1
lineage4.1.2.1.1 1
lineage4.1.2.1 4
lineage4.1.2 6
lineage4.1.1 3
La1.8.1 1
lineage2.2 2
lineage4.9;lineage4.4.2 1
lineage4.9;lineage1.1 1
La1.7.1 1
lineage2 1
lineage4.3.4 1
lineage4.3.4.2.1 6
lineage4.3.2.1 3
lineage4.3.4.1 2
7
lineage4.6.4 1
lineage4 3
lineage4.9.1 2
lineage3.1.1 1
lineage4.5 1
lineage1.2.2.2 1
lineage2.2.1.1 1
lineage3 1
lineage5.1.1 1
lineage4.8.1 1
lineage4.4.1.1 2
lineage4.1.1.3 2
lineage4.3.4.2 2
lineage4.4.1 1
lineage4;lineage2 1
lineage4.1 1
lineage4.6.2.2 1
spoligotype Counts
spoligotype Count
None 96
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1011480 MDR-TB lineage4.8 None
ERR736805 Sensitive lineage2.2.1 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR751317 Sensitive lineage4.9 None
ERR751729 Other lineage1.1.1 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
ERR9786498 Sensitive lineage4.1.2.1 None
SRR1062851 MDR-TB lineage4.8 None
SRR1011488 Other lineage2.2.1 None
SRR1180237 Sensitive lineage4.1.2 None
SRR1172177 MDR-TB lineage4.1.1 None
SRR1062859 Sensitive lineage2.2.1 None
SRR11294512 Other La1.8.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1181136 Sensitive lineage2.2 None
SRR12199468 Sensitive lineage4.9;lineage4.4.2 None
SRR1181319 Other lineage2.2.1 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1182994 Sensitive lineage4.1.2 None
SRR1792247 Other La1.7.1 None
SRR124452 HR-TB lineage2 None
ERR161125 Sensitive lineage4.3.4 None
ERR176780 Sensitive lineage4.9 None
ERR190339 Sensitive lineage4.3.4.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
SRR2101529 Sensitive lineage4.3.2.1 None
ERR1465744 Sensitive lineage4.1.2.1 None
ERR161173 Sensitive lineage4.3.4.2.1 None
ERR161170 Sensitive lineage4.3.4.1 None
ERR176740 HR-TB None
ERR176450 Sensitive lineage4.1.1 None
ERR176475 Sensitive lineage4.3.4.2.1 None
ERR163988 Sensitive lineage4.1.2 None
ERR1679639 Other lineage4.6.4 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR216949 Sensitive lineage4 None
ERR212015 Sensitive lineage4.8 None
ERR212082 Sensitive lineage4.9.1 None
ERR216901 Other lineage3.1.1 None
ERR216930 Sensitive lineage4.3.4.1 None
SAMN02350437 MDR-TB lineage4.8 None
SRR4033203 Sensitive lineage4.9 None
ERR2179695 Sensitive lineage4.5 None
ERR245810 Sensitive lineage4.9.1 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR5153236 MDR-TB lineage2.2.1 None
ERR2660495 Sensitive lineage1.2.2.2 None
SRR5535690 Sensitive lineage2.2.1.1 None
SRR5341430 Other lineage3 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR2660536 Sensitive lineage2.2.1 None
SRR6044925 Sensitive lineage4.9 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR6480593 Sensitive lineage4.1.2.1 None
ERR502480 Other lineage5.1.1 None
ERR485006 HR-TB lineage4.9 None
SRR6982115 Sensitive lineage4 None
SRR6982410 Other lineage4.8.1 None
SRR6982178 Sensitive lineage2.2 None
SRR6982168 Sensitive lineage4.4.1.1 None
SRR6982138 Sensitive lineage4 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6982349 Sensitive lineage2.2.1 None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR6982257 RR-TB lineage4.1.2.1 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR6982508 Sensitive lineage4.9 None
SRR6982272 Sensitive lineage4.9 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR6982342 Sensitive lineage4.3.2.1 None
SRR6981918 Sensitive lineage4.4.1 None
SRR6981912 Sensitive None
SRR6982510 Sensitive lineage4;lineage2 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6982070 RR-TB None
ERR323036 HR-TB None
SRR6981962 Sensitive None
ERR323061 Sensitive lineage4.9 None
SRR8346061 Pre-XDR-TB lineage2.2.1 None
ERR323041 HR-TB None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR037501 Sensitive lineage4.3.4.2.1 None
ERR1082121 Sensitive lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR133816 MDR-TB lineage2.2.1 None
ERR137226 MDR-TB lineage2.2.1 None
ERR3324329 HR-TB lineage4.1.1.3 None
ERR3324345 RR-TB lineage4.1 None
ERR1203078 Sensitive lineage4.6.2.2 None
ERR144568 Pre-XDR-TB None
ERR473279 Other lineage4.9 None
ERR473367 Sensitive lineage4.9 None