EBG00000313339 - n.980C>G
Drug resistance types
10 Sensitive
17 RR-TB
10 HR-TB
6 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
124 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1 | 28 |
| lineage4.8 | 16 |
| lineage4.3.3 | 12 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 25 |
| lineage1.1.2 | 8 |
| lineage4.1.1.3 | 2 |
| lineage3 | 25 |
| lineage4.4.2 | 2 |
| lineage1.1.3.1 | 5 |
| lineage4.9 | 4 |
| lineage4.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage5 | 2 |
| lineage4 | 4 |
| 4 | |
| lineage3.1.1 | 5 |
| lineage4.7 | 2 |
| lineage4.6 | 2 |
| lineage1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.6.2.2 | 6 |
| lineage3.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180206 | Sensitive | lineage4.8 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR19303985 | Other | lineage4.8 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR21595927 | HR-TB | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4815618 | Other | lineage4.8 | None | ERR4815613 | Other | lineage3 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4814623 | Other | lineage4.8 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4817046 | Other | lineage3 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4816954 | Other | lineage4.1.2.1 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4815923 | Sensitive | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816232 | Other | lineage4 | None | ERR4816464 | Other | lineage3 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | SRR3675565 | Other | lineage3 | None | ERR4816555 | Other | lineage3 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816690 | Other | None | ERR4816696 | Other | lineage3 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4817665 | Other | lineage4.8 | None | ERR4817710 | Other | lineage1.1.2 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4817895 | Other | lineage4.1.2.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4818988 | Other | lineage1 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818008 | Other | lineage4.3.3 | None | ERR4818752 | Other | lineage3 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR2512536 | Other | lineage3.1.3 | None | ERR4818190 | Other | lineage4.8 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | SRR5007186 | Other | lineage4.6 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819183 | Other | lineage3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4820324 | Other | lineage4 | None | ERR2514261 | Other | lineage3 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819593 | Other | lineage4.5 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514533 | Other | lineage4.9 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2514834 | Other | lineage4.7 | None | ERR4821028 | Sensitive | lineage3.1.1 | None | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821829 | Other | lineage1.1.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821891 | Other | lineage4.8 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | ERR4821310 | Other | lineage5 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821325 | Other | lineage3 | None | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821610 | Other | lineage4.3.2 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6046208 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044993 | Other | lineage3 | None | SRR6046534 | Other | lineage1.1.2 | None | ERR4829261 | Other | lineage2.2.1 | None | ERR4829289 | Other | lineage4.1.2.1 | None | ERR4829337 | Other | lineage4.8 | None | ERR4819166 | Other | lineage3 | gb | ERR4815784 | Other | lineage2.2.1 | gb | SRR7131026 | Other | lineage2.2.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR4819324 | Other | lineage4.8 | gb | ERR10796634 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | ERR4821761 | Other | lineage3 | gb | ERR2515077 | Sensitive | lineage3 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None |
|---|
