Rv0407 - c.69A>C
Drug resistance types
2 Sensitive
0 RR-TB
71 HR-TB
4 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| 58 | |
| lineage4.1.2.1 | 5 |
| lineage3.1 | 2 |
| lineage4.9 | 4 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2 | 4 |
| lineage3 | 2 |
| La3 | 1 |
| lineage4 | 4 |
| lineage2.2.1 | 5 |
| lineage4.4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 100 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3468544 | HR-TB | None | ERR387051 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797083 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4188350 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR6359045 | HR-TB | None | ERR736839 | Other | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9786843 | Other | None | ERR990545 | Other | lineage3 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837677 | Sensitive | lineage4.9 | None | SRR13837703 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR13861566 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4818929 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6325442 | HR-TB | None | ERR294248 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None |
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