Rv0668 - c.-426C>T
Drug resistance types
2 Sensitive
23 RR-TB
7 HR-TB
4 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2 | 1 |
| lineage1.1.2 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.3 | 5 |
| lineage1.1.3.1 | 1 |
| lineage4.9 | 15 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage2.2.1 | 7 |
| lineage4.1.2 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2.1 | 5 |
| lineage5 | 2 |
| lineage4.2 | 1 |
| lineage3.1 | 1 |
| 3 | |
| lineage3 | 5 |
| lineage4.6.2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1 | 1 |
| lineage4.8 | 6 |
| lineage4.1.1.3.1 | 2 |
| La1.2.BCG | 1 |
| lineage4.8.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4 | 5 |
| lineage3.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.7 | 1 |
| lineage2.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 87 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814700 | Other | lineage4.3.3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4815551 | Other | lineage2.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4816043 | Other | lineage4.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817131 | Pre-XDR-TB | None | ERR4818663 | Other | lineage3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818831 | Other | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818509 | RR-TB | La1.2.BCG | gb | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | ERR4819456 | Other | lineage4.8 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820827 | Other | lineage4.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820833 | HR-TB | None | ERR4819967 | Other | lineage4.3.3 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4820967 | HR-TB | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4820679 | Other | lineage4.8 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821310 | Other | lineage5 | None | ERR4821373 | HR-TB | lineage4.1.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821572 | Other | lineage2.1 | None | SRR6045909 | Other | lineage4.8 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045928 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046541 | Other | lineage4.9 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2101408 | Sensitive | lineage4.1.1.3 | None |
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