EBG00000313325 - n.551A>T
Drug resistance types
12 Sensitive
20 RR-TB
14 HR-TB
5 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
92 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 14 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 32 |
| 6 | |
| lineage3 | 17 |
| lineage4.1.2.1 | 7 |
| lineage4.6.2.2 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.9 | 21 |
| lineage4.6 | 1 |
| lineage4 | 13 |
| lineage1.1.2 | 3 |
| lineage4;lineage2 | 1 |
| lineage4.5 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4;lineage3 | 1 |
| lineage1.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.3 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4.6.5 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 151 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR192070 | Other | None | ERR2229541 | Other | lineage4.8 | None | ERR4816001 | Other | lineage3 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816177 | Other | lineage4.1.2.1 | None | ERR4816129 | HR-TB | lineage4.6.2.2 | gb | ERR2229147 | Other | lineage4.8 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR4817301 | Other | lineage4.9 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229366 | Other | lineage4.8 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR2229436 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2229810 | Other | lineage4.8 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817761 | Other | lineage4.6.1.1 | gb | ERR4817735 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4817977 | Other | lineage4.8 | gb | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4819425 | Other | lineage3 | gb | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820130 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820922 | Other | lineage4.1.2.1 | gb | SRR6046117 | RR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4821054 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821409 | Other | lineage4.8 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045616 | Other | lineage4.4.1.2 | gb | SRR5818666 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6045289 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046716 | Other | lineage3 | gb | SRR6046739 | Other | lineage1.1.2 | None | SRR6046815 | Other | lineage3 | None | SRR6046607 | Other | lineage3 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR7131031 | Other | lineage4.2.2.2 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131169 | Other | lineage4.1.2.1 | None | ERR017781 | Other | lineage3 | None | SRR9971235 | XDR-TB | lineage4.4.1.1.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR10395964 | MDR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796599 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796630 | HR-TB | None | ERR10796596 | Other | lineage4.9 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR144568 | Pre-XDR-TB | None | ERR3261351 | Other | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | ERR4188330 | Other | La1.8.1 | None | ERR4407553 | Sensitive | lineage4.6.2.2 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR473279 | Other | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117823 | Other | lineage1.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1140942 | Other | None | SRR11462861 | Other | La1.8.1 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1173833 | Other | lineage4.9 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972348 | MDR-TB | lineage2.2.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR2229577 | Sensitive | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None |
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