EBG00000313339 - n.2578A>G
Drug resistance types
5 Sensitive
26 RR-TB
5 HR-TB
9 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 55 |
| lineage4.9 | 8 |
| lineage4.1.1.3 | 2 |
| lineage3 | 4 |
| lineage4.1.2 | 1 |
| lineage4.6.1.2 | 4 |
| lineage2.2.1 | 7 |
| lineage4.3.3 | 3 |
| lineage4.4.1.2 | 2 |
| lineage4.8;lineage4.9 | 1 |
| lineage5.1 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.1.2.1 | 3 |
| 1 | |
| lineage4.2.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2229204 | Other | lineage4.8 | None | SRR1173421 | Other | lineage4.9 | None | ERR2228899 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR978752 | Other | lineage4.8 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | DRR034348 | Other | lineage2.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR017781 | Other | lineage3 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR978756 | Other | lineage4.8 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR2229733 | Other | lineage4.8 | dk | SAMEA3501015 | Other | lineage4.8 | None | ERR4192364 | Sensitive | lineage5.1 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR2228838 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR978748 | Other | lineage4.8 | None | ERR978727 | Other | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR911930 | Other | lineage4.8 | None | SRR1173361 | MDR-TB | lineage4.6.1.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR978693 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR2229147 | Other | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR5818452 | Other | lineage4.9 | None | ERR4816690 | Other | None | ERR4820151 | Other | lineage4.8 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | SRR5818388 | Other | lineage4.9 | None | SRR7070320 | Other | lineage4.8 | None | SRR7070134 | Other | lineage3.1.1 | None | ERR2229336 | Other | lineage4.8 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR10796599 | Other | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR2229337 | Other | lineage4.8 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR2229541 | Other | lineage4.8 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR911929 | Other | lineage4.8 | None | ERR2229540 | Sensitive | lineage4.8 | None | ERR4818691 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR4815502 | Other | lineage4.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None |
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