EBG00000313339 - n.2578A>G
Drug resistance types
16 Sensitive
30 RR-TB
11 HR-TB
13 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
113 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 24 |
| La1.8.1 | 2 |
| lineage3 | 17 |
| lineage4.2.1 | 4 |
| lineage4.3.2 | 3 |
| lineage4.9 | 15 |
| lineage4 | 7 |
| lineage4.1.2.1 | 15 |
| lineage5 | 1 |
| lineage4.1.2 | 4 |
| lineage9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.6.1 | 2 |
| lineage4.8 | 40 |
| lineage4.3.3 | 8 |
| lineage4.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.4.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.2.1 | 1 |
| 4 | |
| lineage4.7 | 2 |
| lineage3.1.1 | 1 |
| lineage4.5 | 2 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.2.2 | 6 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.3 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage3.1.2 | 1 |
| lineage4.8.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 193 |
Geographic prevalence
Country level data for this variant is available for 30 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | DRR034348 | Other | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR5087717 | Other | La1.8.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR019855 | Other | lineage3 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR017781 | Other | lineage3 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR4797581 | Pre-XDR-TB | lineage2.2.1 | in | ERR10796599 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR4192364 | Sensitive | lineage5 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR5865969 | MDR-TB | lineage2.2.1 | None | ERR5336156 | Sensitive | lineage9 | None | ERR5864927 | MDR-TB | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1173361 | MDR-TB | lineage4.6.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1172282 | Other | lineage4.9 | None | SRR11972227 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972346 | Pre-XDR-TB | lineage2.2.1 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR15368751 | Sensitive | lineage2.2.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002896 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR19303805 | Other | lineage4.8 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR4815502 | Other | lineage4.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3085299 | Pre-XDR-TB | lineage4 | None | SRR3085326 | Sensitive | lineage4.8 | None | SRR3086370 | Pre-XDR-TB | lineage4 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675475 | Other | lineage4.1.1.3 | None | SRR3082067 | Sensitive | lineage4.8 | None | ERR4814554 | Other | lineage4.1 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4814623 | Other | lineage4.8 | None | SAMN02567676 | MDR-TB | lineage4.6.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814952 | Sensitive | lineage3 | None | ERR2228965 | Other | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR2229810 | Other | lineage4.8 | None | ERR4815898 | Other | lineage3 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR1949959 | Sensitive | lineage4.8 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4815956 | Other | lineage1.1.2 | None | ERR4816232 | Other | lineage4 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816243 | Sensitive | lineage3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229204 | Other | lineage4.8 | None | ERR4816561 | Sensitive | lineage3 | gb | ERR4817189 | Other | lineage4.7 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2229336 | Other | lineage4.8 | None | ERR2229337 | Other | lineage4.8 | None | ERR4816650 | Sensitive | lineage4.1.2.1 | None | ERR4816690 | Other | None | ERR2229366 | Other | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228813 | Other | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228838 | RR-TB | lineage4.8 | None | ERR4817294 | Other | lineage4.1.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2228890 | Other | lineage4 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4818685 | Other | lineage4.6.2.2 | None | ERR4817795 | Other | lineage4.7 | gb | SAMEA3450033 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR2510749 | Sensitive | lineage4.1.2.1 | it | ERR4819007 | Other | lineage2.2.1 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818064 | Other | lineage4.8 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2512443 | Other | lineage4.8 | gb | ERR2515055 | Other | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818190 | Other | lineage4.8 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR2513298 | Other | lineage4.8 | gb | ERR2512841 | HR-TB | lineage2.2.1 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819522 | Other | lineage4.2.1 | gb | ERR4819423 | Other | lineage4.6.2.2 | None | ERR2514261 | Other | lineage3 | None | ERR4819567 | Other | lineage2.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819593 | Other | lineage4.5 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514533 | Other | lineage4.9 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820891 | Other | lineage4.9 | gb | ERR4820478 | Other | lineage3.1.3 | None | ERR4820151 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2514968 | Other | lineage4.3.3 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820001 | Other | lineage4.8 | gb | ERR4820107 | RR-TB | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4820194 | Other | La3 | None | ERR4820188 | Other | lineage3 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821105 | Other | lineage3.1.2 | gb | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821286 | Other | lineage4.8 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4821214 | RR-TB | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821761 | Other | lineage3 | gb | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821584 | Other | lineage4.8.2 | None | SRR5818388 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR6046208 | Other | lineage4 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044958 | Other | lineage4.4.1.1 | None | ERR4828289 | Sensitive | lineage2.2.1 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6046815 | Other | lineage3 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6397733 | Other | lineage4.4.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6397815 | Other | lineage4.4.1.1 | None |
|---|
