lineage | Count |
---|---|
lineage4.1.2.1 | 7 |
84 | |
lineage4.6.1.1 | 2 |
lineage4 | 42 |
lineage4.4.1.1 | 2 |
lineage4.9 | 13 |
lineage2.2.1 | 5 |
lineage3.1 | 3 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4;lineage1.1.2 | 1 |
lineage4.2.1 | 1 |
lineage1.1 | 1 |
lineage4.3.3 | 1 |
La2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage2.2 | 1 |
La1.2 | 1 |
lineage3.1.2 | 1 |
lineage4.3.2 | 1 |
spoligotype | Count |
---|---|
None | 171 |
ID | Drug resistance | Lineage | Country iso2 | SRR1165506 | Other | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1172951 | Other | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR13861305 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR6325445 | HR-TB | None | SRR16157105 | Pre-XDR-TB | lineage2.2.1 | None | SRR1640750 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675550 | Other | None | SRR3675270 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3742665 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR1035162 | Other | None | SRR5341330 | HR-TB | None | SRR5341418 | Other | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341302 | HR-TB | None | ERR278594 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046225 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR323039 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR133986 | HR-TB | None | ERR363502 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR363479 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None |
---|