Rv0639 - c.228C>T


Drug resistance types
11 Sensitive 3 RR-TB 9 HR-TB 12 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.9 13
lineage5.2 4
lineage2.2.1 5
lineage4.6.3;lineage4.9 1
2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage3 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.3.4.2.1 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1.1 1
M.canetti;lineage4.2 1
M.canetti;lineage4.6.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.8 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage2.2 2
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.2.1.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 63
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4596910 Sensitive lineage4.9 None
ERR4872093 MDR-TB lineage5.2 None
SRR1183145 Other lineage2.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR212001 HR-TB None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR28351347 Other lineage3 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR29096882 Sensitive lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR29096394 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR161149 Sensitive lineage4.3.4.2.1 mw
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR1023509 Other lineage4.9 None
ERR9119499 MDR-TB lineage5.2 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR7821163 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1180270 Other lineage2.2.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
SRR28044873 Pre-XDR-TB lineage3 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR29096448 Sensitive lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR1063883 HR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR29096530 Sensitive lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1034634 HR-TB lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4820112 Sensitive lineage4.1.1.1 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9896144 Other lineage3 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR29096710 Sensitive lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR2503460 Sensitive lineage4.3.3 fi
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None