lineage | Count |
---|---|
66 | |
lineage4.9 | 15 |
lineage4.1.2.1 | 5 |
lineage2.2.1 | 5 |
lineage1.1 | 1 |
lineage4.2.1.1 | 1 |
lineage3.1 | 2 |
lineage4.3.4.2.1 | 1 |
La1.8.1 | 1 |
lineage4 | 12 |
La1 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.3.2 | 1 |
lineage1.1.2 | 1 |
lineage2.2.2 | 1 |
lineage4.4.1.1 | 2 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4;lineage1.1.2 | 1 |
lineage4.1.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 121 |
ID | Drug resistance | Lineage | Country iso2 | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323038 | HR-TB | None | ERR323063 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063859 | HR-TB | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3445503 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR4798406 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR6358837 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13837615 | Sensitive | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861539 | HR-TB | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR14801749 | Sensitive | None | ERR176778 | HR-TB | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR176651 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181887 | HR-TB | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | SRR5341387 | Other | lineage4 | None | ERR278594 | HR-TB | None | SRR5341418 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None |
---|