lineage | Count |
---|---|
lineage2.2.1 | 4 |
46 | |
lineage2.1 | 2 |
lineage4.9 | 6 |
lineage4.4.1.1 | 4 |
lineage2 | 3 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.3.3 | 4 |
lineage4.9;La3 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4 | 5 |
lineage4.8 | 1 |
lineage4.1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage3 | 1 |
lineage4.1.1.3 | 1 |
lineage4.6.1.1 | 1 |
lineage3.1 | 2 |
spoligotype | Count |
---|---|
None | 86 |
ID | Drug resistance | Lineage | Country iso2 | SRR18003019 | Other | lineage2.2.1 | None | SRR15368973 | Other | None | SRR1710057 | Other | lineage2.1 | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3416776 | Other | lineage2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR2027263 | Other | lineage4 | None | ERR4817060 | RR-TB | None | SRR3742665 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4817735 | Other | lineage4.8 | None | ERR502912 | Other | lineage2.2.1 | None | ERR234659 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6789626 | Other | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR7535086 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4810741 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4800341 | Other | lineage3 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR4407463 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR702404 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR1169194 | Other | None | ERR736874 | HR-TB | None | SRR1172234 | Other | None | SRR1173118 | Other | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1172728 | MDR-TB | None | SRR1172857 | MDR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173400 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1173788 | Other | None | SRR1184372 | MDR-TB | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None |
---|