EBG00000313339 - n.2938C>A


Drug resistance types
36 Sensitive 5 RR-TB 4 HR-TB 11 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 44 Other
lineage Counts
lineage Count
La1.8.1 4
6
lineage4.1.2.1 6
lineage4.8 2
lineage2.2.1.1 1
lineage4.3.2.1 2
lineage4.5 1
lineage4.6.1.1 1
lineage4 5
lineage4.6.5 1
lineage4.4.1.1 5
lineage3 6
lineage4.9.1 1
lineage4.1.2 1
lineage4.1.1.3.1 1
lineage2.2.1 11
lineage6.3.1 1
La1.2.BCG 1
lineage4.3.4.2.1 2
lineage1.1.2 1
lineage3.1.1 2
lineage3.1.3 1
lineage4.9 13
lineage4.2.2.2 1
lineage4.8.1 1
lineage4.1.4 1
lineage4.1.1.3 4
lineage2.2 2
lineage4.3.4.2 1
lineage4.4.1 1
lineage4.1.1 1
lineage4.3.3 4
lineage4;lineage2 1
lineage4.6.2.2 1
lineage4.9;lineage4.1 1
lineage4.3.4.1 1
lineage4;La1 1
lineage4.1 1
lineage6.1.1 2
La1 1
lineage6.1.3 1
lineage4.7 1
La1.6 1
lineage4.9;lineage1.1 1
spoligotype Counts
spoligotype Count
None 104
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1792378 Other La1.8.1 None
ERR4815310 Other None
ERR1465744 Sensitive lineage4.1.2.1 None
ERR4815193 MDR-TB lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR2101529 Sensitive lineage4.3.2.1 None
ERR2179785 Sensitive lineage4.5 None
ERR1198988 Sensitive lineage4.6.1.1 None
ERR4815550 Other lineage4 None
ERR4814745 Other lineage4.6.5 None
ERR4814697 Sensitive lineage4.4.1.1 None
ERR4815572 Other lineage4.1.2.1 None
ERR4817434 Other lineage3 None
ERR2027257 Other lineage4.1.2.1 None
ERR216928 Other lineage4.9.1 None
ERR4816868 Other lineage4.4.1.1 None
ERR4817294 Other lineage4.1.2 None
ERR3275190 Other lineage3 nl
ERR4817976 HR-TB lineage4.1.2.1 None
ERR2514073 Other lineage4.1.1.3.1 None
SRR5152904 Other lineage2.2.1 None
SRR5152926 MDR-TB lineage2.2.1 None
ERR4818440 Other lineage6.3.1 None
SRR5341317 Pre-XDR-TB lineage3 None
ERR4819463 Other La1.2.BCG None
ERR4820742 Other lineage4.3.4.2.1 None
ERR4819533 Other lineage1.1.2 None
ERR4820829 Other lineage4.8 None
ERR4821791 HR-TB lineage4.1.2.1 None
ERR2446509 Other lineage3 nl
ERR4821054 Other lineage3 None
SRR6045516 Other lineage3.1.1 None
ERR2660536 Sensitive lineage2.2.1 None
SRR6045613 Other lineage3.1.3 None
SRR6044841 Other lineage4.9 None
SRR5818394 Other lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6046752 Sensitive lineage4.2.2.2 None
SRR6044936 Other lineage4 None
SRR6045138 Other lineage3.1.1 None
SRR6046442 Other lineage3 None
SRR6982410 Other lineage4.8.1 None
ERR4831746 MDR-TB lineage2.2.1 None
ERR4828962 Sensitive lineage4.1.4 it
SRR6982138 Sensitive lineage4 None
SRR6982115 Sensitive lineage4 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6982508 Sensitive lineage4.9 None
SRR6982168 Sensitive lineage4.4.1.1 None
SRR6982178 Sensitive lineage2.2 None
SRR6982257 RR-TB lineage4.1.2.1 None
SRR6982272 Sensitive lineage4.9 None
SRR6981962 Sensitive None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR6982342 Sensitive lineage4.3.2.1 None
SRR6981912 Sensitive None
SRR6981918 Sensitive lineage4.4.1 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR6982070 RR-TB None
SRR6982471 Sensitive lineage2.2.1 None
SRR6855939 Sensitive lineage2.2.1 None
SRR9970983 MDR-TB lineage4.3.3 None
SRR9971243 Pre-XDR-TB lineage4.3.3 None
ERR502942 Sensitive lineage4.9 None
SRR6982510 Sensitive lineage4;lineage2 None
SRR7131004 Other lineage4.6.2.2 None
ERR10796559 Other lineage4.9 None
SRR7645856 Sensitive lineage4.4.1.1 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
SRR7645853 MDR-TB lineage2.2.1 None
SRR9971195 MDR-TB lineage4.3.3 None
ERR10796572 Other lineage4.3.4.1 None
ERR3283043 Other lineage4.9 None
ERR144568 Pre-XDR-TB None
ERR3283008 Other lineage4.9 None
ERR137226 MDR-TB lineage2.2.1 None
ERR3324329 HR-TB lineage4.1.1.3 None
ERR4187641 Other lineage4;La1 None
ERR3324345 RR-TB lineage4.1 None
ERR3801358 Sensitive lineage6.1.1 None
ERR4187921 Other None
ERR4188352 Other La1.8.1 None
ERR4187995 Other La1.8.1 None
ERR4188330 Other La1.8.1 None
ERR6197034 Other lineage4.9 None
ERR4188396 Sensitive La1 None
ERR4188375 Sensitive lineage4.9 None
ERR4769512 Sensitive lineage4.9 None
ERR9787079 Other lineage6.1.3 None
ERR6362500 Pre-XDR-TB lineage2.2.1 None
ERR8774091 Sensitive lineage4.1.1.3 None
ERR751317 Sensitive lineage4.9 None
ERR8774092 Sensitive lineage4.1.1.3 None
SRR10315457 RR-TB lineage4.7 None
ERR9787146 Sensitive lineage6.1.1 None
SRR10993953 Other La1.6 None
SRR10315701 MDR-TB lineage4.3.3 None
SRR1181319 Other lineage2.2.1 None
SRR1166181 MDR-TB lineage4 None
SRR1181136 Sensitive lineage2.2 None
SRR16156775 Other lineage4.9 None
SRR11972387 MDR-TB lineage2.2.1 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None