EBG00000313339 - n.2938C>A
Drug resistance types
40 Sensitive
4 RR-TB
1 HR-TB
11 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage6.3.1 | 1 |
| lineage4.3.2.1 | 4 |
| La1.8.1;lineage4.9 | 3 |
| lineage3 | 5 |
| La1.8.1 | 5 |
| lineage4.2.2.2 | 3 |
| lineage2.2.1 | 12 |
| lineage4.1.4 | 1 |
| lineage4.3.3 | 4 |
| lineage4.9 | 7 |
| lineage6.1.1 | 2 |
| lineage4.1.2.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.8 | 2 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.2.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1 | 1 |
| La1.6 | 1 |
| 1 | |
| lineage2.2.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.8.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818440 | Other | lineage6.3.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR5152904 | Other | lineage2.2.1 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | ERR4828962 | Sensitive | lineage4.1.4 | it | SRR9970983 | MDR-TB | lineage4.3.3 | None | ERR4187921 | Sensitive | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | ERR3801358 | Sensitive | lineage6.1.1 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR638895 | Sensitive | lineage4.9 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | ERR4820829 | Other | lineage4.8 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4821054 | Sensitive | lineage3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1792378 | Other | La1.8.1 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | ERR9787079 | Other | lineage6.1.3 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR2446509 | Other | lineage3 | nl | SRR6982272 | Sensitive | lineage4.9 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | SRR6982508 | Sensitive | lineage4.9 | None | ERR9787146 | Sensitive | lineage6.1.1 | None | ERR3275190 | Other | lineage3 | nl | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993953 | Other | La1.6 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR144568 | Sensitive | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | SRR7617847 | Other | La1.8.1 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4188352 | Sensitive | La1.8.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | ERR216928 | Other | lineage4.9.1 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None |
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