EBG00000313339 - n.2938C>A
Drug resistance types
35 Sensitive
5 RR-TB
5 HR-TB
11 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4;La1 | 1 |
| 6 | |
| La1.8.1 | 4 |
| lineage4.9 | 13 |
| La1 | 1 |
| La1.6 | 1 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1 | 12 |
| lineage6.1.3 | 1 |
| lineage6.1.1 | 2 |
| lineage4.7 | 1 |
| lineage4.3.3 | 5 |
| lineage2.2 | 2 |
| lineage4 | 5 |
| lineage4.1.2 | 2 |
| lineage4.9;lineage1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4.5 | 1 |
| lineage4.8 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4.6.5 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage3 | 6 |
| lineage6.3.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.2 | 1 |
| lineage3.1.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4187641 | Other | lineage4;La1 | None | ERR4187921 | Other | None | ERR4187995 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188396 | Sensitive | La1 | None | ERR6197034 | Other | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | SRR10993953 | Other | La1.6 | None | ERR8774092 | Sensitive | lineage4.1.1.3 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR8774091 | Sensitive | lineage4.1.1.3 | None | ERR9787079 | Other | lineage6.1.3 | None | ERR9787146 | Sensitive | lineage6.1.1 | None | SRR10315457 | RR-TB | lineage4.7 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1186993 | HR-TB | lineage4.1.2 | ca | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1792378 | Other | La1.8.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815310 | Other | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4815550 | Other | lineage4 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR216928 | Other | lineage4.9.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4817434 | Other | lineage3 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4817903 | Other | lineage4.1.2.1 | gb | ERR4817976 | HR-TB | lineage4.1.2.1 | None | SRR5152904 | Other | lineage2.2.1 | None | ERR4819463 | Other | La1.2.BCG | None | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4820829 | Other | lineage4.8 | None | ERR4821054 | Other | lineage3 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR5818394 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6045138 | Other | lineage3.1.1 | None | ERR4828962 | Other | lineage4.1.4 | it | SRR6044936 | Other | lineage4 | None | SRR6046442 | Other | lineage3 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR4831746 | MDR-TB | lineage2.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6981962 | Sensitive | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981912 | Sensitive | None | SRR6981918 | Sensitive | lineage4.4.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR6855939 | Sensitive | lineage2.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982070 | RR-TB | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | ERR3275190 | Other | lineage3 | nl | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR10796559 | Other | lineage4.9 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR144568 | Pre-XDR-TB | None | ERR3283008 | Other | lineage4.9 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3801358 | Sensitive | lineage6.1.1 | None |
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