Rv3106 - c.315C>G
Drug resistance types
3 Sensitive
0 RR-TB
72 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| 80 | |
| lineage2.2.1 | 3 |
| lineage4.9 | 4 |
| lineage5.2 | 2 |
| lineage4.3.2 | 7 |
| lineage4.6.2.2 | 2 |
| La2 | 1 |
| lineage3.1 | 2 |
| lineage4 | 2 |
| La1 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.6.1 | 1 |
| lineage4.3 | 2 |
| lineage4.4.1.1 | 1 |
| lineage2.2 | 2 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 117 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341418 | Other | None | ERR2693231 | Other | None | SRR5341302 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2693254 | Other | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | SRR6045555 | HR-TB | None | ERR2693257 | Other | None | SRR6044890 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR294248 | HR-TB | None | ERR4812983 | MDR-TB | lineage4.3.2 | pe | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502524 | HR-TB | La2 | None | ERR2184509 | HR-TB | lineage4.3.2 | pe | ERR323034 | HR-TB | lineage3.1 | None | ERR502889 | Other | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7535086 | Other | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1034652 | Other | None | ERR3283032 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR12118025 | MDR-TB | lineage4.3.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3287562 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797061 | Other | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR6358837 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4188350 | HR-TB | None | ERR702404 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR10808862 | HR-TB | lineage4.3 | None | SRR10808497 | HR-TB | lineage4.3.2 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR12416824 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR1640750 | HR-TB | None | SRR21675437 | Sensitive | lineage4.3.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR21677635 | Sensitive | lineage4.3.2 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675234 | Other | None | ERR176793 | Other | lineage4.1.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675465 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR176751 | HR-TB | None | ERR176643 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4818615 | Other | None | ERR2184640 | HR-TB | lineage4.3 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None |
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