EBG00000313325 - n.1000G>A
Drug resistance types
36 Sensitive
3 RR-TB
15 HR-TB
4 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 11 |
| lineage4 | 6 |
| lineage4.6.2.2 | 1 |
| lineage4.9 | 12 |
| lineage4.1.2.1 | 3 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.4.2 | 3 |
| La1.6 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1 | 5 |
| lineage2.2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage3 | 1 |
| lineage4.8 | 6 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| La1.8.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.3 | 4 |
| lineage4.6.4 | 1 |
| 3 | |
| lineage4.2.1.1 | 1 |
| lineage1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | DRR184982 | RR-TB | lineage2.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4797754 | Pre-XDR-TB | lineage2.2.1 | in | ERR6358951 | HR-TB | lineage4 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR6359066 | HR-TB | lineage4 | None | SRR10993956 | Other | La1.6 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9787336 | Other | lineage6 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR2515460 | Sensitive | lineage4.8 | za | ERR216965 | HR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR4820484 | Other | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6982078 | Sensitive | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982192 | Sensitive | lineage4.1.1.3 | None | SRR6982196 | Sensitive | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982405 | Sensitive | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None |
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