EBG00000313325 - n.843dupT


Drug resistance types
5 Sensitive 20 RR-TB 22 HR-TB 12 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 202 Other
lineage Counts
lineage Count
lineage3 34
lineage4.4.1.1 4
lineage4.2.2.2 5
lineage4.4.1.1.1 3
lineage2.2.1 18
lineage1.2.1.2 2
lineage1.2.1.2.1 5
lineage4.1.1.3 5
lineage3.1.3 1
lineage1.2.2.2 3
lineage4.8 26
lineage4.3.4.2.1 4
lineage4.4.2 1
lineage1.1.2 13
lineage3.1.2 3
lineage4.9 7
lineage4.1.2.1 40
lineage4.1.2 2
lineage4.1.3 1
lineage5.1.4 1
lineage4.6.2.2 8
lineage4.1 3
lineage4.5 4
lineage4.7 6
lineage4.2.1 5
lineage4.3.4.2 1
lineage4.1.1.3.1 7
lineage2.2 1
lineage4.2 2
lineage4.8;lineage4.2.1.1 1
lineage4.6.3 1
6
lineage3.1 2
lineage4.3.3 7
lineage4.8.1 1
lineage4.6 1
lineage1.1.3.1 3
lineage4 3
lineage4.3.2 3
lineage4.2.2.1 1
lineage4.1.1.2 1
lineage4;lineage3.1.2.1 1
lineage4.2.1.1 2
La1.8.1 1
lineage4.8.2 4
La3 1
lineage1.1.1 2
lineage4.4 2
lineage4.3.1.1 2
lineage6 1
lineage1.2.2.1 1
lineage4.1.1 1
lineage3.1.1 2
lineage3.1.2.2 1
lineage3.1.2.1 1
spoligotype Counts
spoligotype Count
None 267
Geographic prevalence
Country level data for this variant is available for 84 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR11342657 HR-TB lineage3 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349154 MDR-TB lineage4.4.1.1.1 None
SRR18002932 Pre-XDR-TB lineage2.2.1 None
SRR16370233 Other lineage1.2.1.2 None
SRR18002896 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR11349184 MDR-TB lineage2.2.1 None
SRR18002997 Other lineage2.2.1 None
SRR19304114 Other lineage1.2.1.2.1 None
SRR19224247 Other lineage1.2.1.2 None
ERR4815319 Other lineage4.1.1.3 gb
SRR21686114 Other lineage3.1.3 None
ERR4815172 Other lineage1.2.2.2 None
ERR4815178 Other lineage4.8 gb
ERR4815298 Other lineage4.3.4.2.1 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815255 Other lineage4.4.2 None
ERR4815795 Other lineage1.1.2 None
ERR4815306 Other lineage1.2.1.2.1 gb
ERR4814356 Pre-XDR-TB lineage3.1.2 None
ERR4815777 Other lineage4.9 None
ERR4814362 Other lineage4.8 None
ERR4815771 Other lineage1.2.2.2 gb
ERR4814438 HR-TB lineage4.1.2.1 gb
ERR4814496 RR-TB lineage4.1.2 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4815680 Other lineage1.1.2 gb
ERR4815684 Other lineage5.1.4 gb
ERR4814551 Other lineage4.1.2.1 gb
ERR4814497 HR-TB lineage4.6.2.2 None
ERR4815413 Other lineage4.3.4.2.1 None
ERR4815419 Other lineage4.8 None
ERR4815502 Other lineage4.1 None
ERR4815425 Other lineage4.5 gb
ERR4814748 Other lineage4.8 None
ERR4815476 HR-TB lineage2.2.1 gb
ERR4815783 Other lineage4.1.2.1 gb
ERR4815467 Other lineage3 None
SRR3675230 RR-TB lineage3 None
ERR4814763 Other lineage2.2.1 None
ERR4814761 Other lineage4.8 gb
ERR4814783 Other lineage4.7 None
ERR4814790 Other lineage4.2.1 None
ERR4816968 Other lineage4.2.1 gb
SRR3675252 RR-TB lineage1.1.2 None
ERR4814841 Other lineage4.1 None
ERR3276005 Other lineage4.1.2.1 nl
SRR3675287 Other lineage3 None
ERR4814986 Other lineage4.3.4.2 None
ERR4815039 Other lineage4.1.1.3.1 gb
ERR4815080 Other lineage4.1.2.1 None
ERR4815917 Other lineage2.2.1 gb
SRR3675361 Other lineage1.1.2 gb
ERR4816944 RR-TB lineage2.2 None
ERR4816969 Other lineage4.8 None
ERR4817508 Other lineage4.1.2.1 gb
ERR4816043 Other lineage4.2 None
ERR4816993 Other lineage4.3.4.2.1 None
ERR2027248 Other lineage2.2.1 None
ERR2027252 Other lineage4.8;lineage4.2.1.1 None
ERR2027230 Other lineage4.2.2.2 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR2027292 HR-TB lineage3 None
ERR4817478 Other lineage3 None
ERR4816191 Other lineage3.1.2 gb
ERR4816397 Other lineage1.1.2 None
ERR4816283 Other lineage4.1.2.1 None
ERR4816353 Other lineage2.2.1 gb
ERR4816314 Other lineage1.2.1.2.1 gb
ERR4817368 Other lineage4.6.3 None
ERR4816429 Other lineage1.1.2 None
ERR4817475 Other lineage4.1.1.3 gb
ERR4816493 Other lineage4.1.2.1 None
ERR4816462 Other lineage4.1.2.1 None
ERR4817131 Pre-XDR-TB None
ERR4816604 RR-TB lineage4.1.2 None
ERR4817492 HR-TB lineage3.1 gb
ERR4816610 RR-TB lineage4.3.3 None
ERR4816713 Other lineage1.1.2 gb
ERR4816690 Other None
ERR4817206 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR4817853 Other lineage4.8.1 None
ERR4816757 Other lineage2.2.1 gb
ERR4816882 Other lineage4.8 None
ERR4815814 Other lineage3 gb
ERR2513378 Other lineage3 None
ERR4817803 Other lineage4.2.2.2 None
ERR4817822 Other lineage4.6 None
ERR4817826 RR-TB lineage4.5 None
ERR4817435 Other lineage1.1.3.1 None
ERR4817278 Other lineage4.8 gb
ERR4818671 Other lineage4.8 gb
ERR4817795 Other lineage4.7 gb
ERR4817799 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR2513398 Other lineage4.2.1 gb
ERR4817926 HR-TB lineage4.6.2.2 gb
ERR4818724 Other lineage4.1.2.1 gb
ERR2513401 HR-TB lineage3 None
ERR4818726 Other lineage4.1.2.1 None
ERR4817976 HR-TB lineage4.1.2.1 None
ERR4817964 RR-TB lineage4.1.2.1 gb
ERR4817987 Other lineage4.7 None
ERR4819073 Other lineage4.1.2.1 None
ERR4818003 Other lineage1.2.1.2.1 gb
ERR4818065 Other lineage4.1.2.1 None
ERR4818249 Other lineage4.1.2.1 gb
ERR2512599 Other lineage3 gb
ERR4818261 Other lineage1.1.2 None
ERR4818265 Other lineage4.1.2.1 None
ERR4818274 Other lineage4 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4818407 Other lineage4.3.2 None
ERR2513467 Other lineage1.1.2 None
ERR2512716 HR-TB lineage4.6.2.2 gb
ERR2509885 RR-TB lineage3 None
ERR4818507 RR-TB lineage4.1.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818556 Other lineage3 None
SRR5007170 RR-TB lineage4.9 None
SRR5007165 MDR-TB lineage3 None
ERR4818580 Other lineage4.7 None
ERR2513296 Other lineage4.1.2.1 gb
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007171 Other lineage2.2.1 None
ERR2512849 RR-TB lineage1.1.3.1 None
ERR4819332 Other lineage3 gb
SRR5007180 Other None
ERR4817547 Other lineage4.2.2.1 None
ERR4817584 MDR-TB lineage3 None
ERR4817602 Sensitive lineage4.1.2.1 None
ERR4817645 Other lineage4.8 None
ERR2513681 Other lineage1.1.2 None
ERR4819181 Other lineage3 gb
ERR4820720 Other lineage4.1.2.1 None
ERR4819198 Other lineage2.2.1 None
ERR4820714 Other lineage3 gb
ERR2513808 Other lineage4.1.2.1 gb
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4820270 MDR-TB lineage4.8 gb
ERR2513841 Sensitive lineage4.1.1.3.1 gb
ERR4820723 RR-TB lineage4.4.1.1 None
ERR2513912 Other lineage4.5 gb
ERR4820297 Other lineage4.2.1 None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4819131 Other lineage4 None
ERR4819228 Sensitive lineage4.1.1.2 None
ERR4819491 Other lineage4.1.2.1 None
ERR4819377 Other lineage4;lineage3.1.2.1 None
ERR2514173 Other lineage4.5 gb
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4820364 HR-TB lineage4.2.1.1 gb
ERR2514261 Other lineage3 None
ERR4820404 Other lineage4.3.2 None
ERR4820408 Other lineage4.1.2.1 None
ERR4819630 Other lineage4.8 gb
ERR4820424 Other La1.8.1 gb
ERR4819640 RR-TB lineage4.6.2.2 None
ERR2514479 Other lineage4.8.2 gb
ERR2514515 Other lineage4.2.1 None
ERR4819730 Other lineage4.8 None
ERR4819784 Other lineage4.1.2.1 None
ERR4821154 Other lineage2.2.1 gb
ERR2513819 Pre-XDR-TB lineage4.3.3 gb
ERR4819830 Other lineage2.2.1 None
ERR4820543 Other La3 None
ERR4820558 Other lineage4.8 gb
ERR2514896 Other lineage3 gb
ERR2514968 Other lineage4.3.3 None
ERR4820001 Other lineage4.8 gb
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820652 Other lineage1.1.1 gb
ERR4820151 RR-TB lineage4.8 None
ERR4820679 Other lineage4.8 None
ERR4820907 Other lineage4.1.2.1 gb
ERR4820926 Other lineage4.8 gb
ERR4821791 HR-TB lineage4.1.2.1 None
ERR4820575 Other lineage3 gb
ERR2514962 Other lineage4.4 None
ERR4820880 Other lineage4.2.2.2 gb
ERR4820614 Other lineage3.1.2 None
ERR4820049 Other lineage4.8 gb
ERR4820059 Other lineage3 None
ERR4820122 Other lineage4.3.1.1 None
ERR4820666 Other lineage4.8 gb
ERR4820187 Other lineage4.3.3 None
ERR4820941 HR-TB lineage3 gb
ERR4821011 Other lineage6 None
ERR4821020 Other lineage4.1.1.3.1 None
SRR6046089 Other lineage4.1.2.1 None
ERR4821054 Other lineage3 None
ERR4821853 Other lineage4.3.3 None
ERR4821179 Other lineage4.1.2.1 gb
ERR4821981 Other lineage4.1.2.1 None
ERR4821924 HR-TB lineage4.6.2.2 gb
ERR4821245 Other lineage4.1.2.1 None
ERR4821214 RR-TB None
ERR4821932 Other lineage2.2.1 None
ERR4821940 Other lineage4.9 None
ERR4821953 Other lineage4.7 gb
ERR4822035 Other lineage4.8 None
ERR4821325 Other lineage3 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821719 Other lineage3 gb
ERR4821417 Other lineage1.1.3.1 None
ERR4822105 Other lineage4.1 None
ERR4821449 Other lineage1.2.2.1 gb
ERR4822114 Other lineage4.1.2.1 None
ERR4821595 Other lineage4.1.1.3 None
SRR6045705 Other lineage4.9 None
SRR5818663 Sensitive lineage4.1.2.1 dj
SRR6045847 Other lineage4.3.3 gb
SRR6044784 MDR-TB lineage3 None
ERR4822085 Other lineage4.8 gb
ERR4821477 Other lineage4.8 None
ERR4821492 HR-TB lineage3 None
ERR4822154 Other lineage4.1.2.1 None
ERR4821556 HR-TB lineage4.6.2.2 gb
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045726 Other lineage3 None
SRR5818612 Other lineage4.2.2.2 None
SRR6045920 Other lineage4.1.1 gb
SRR6045899 Other lineage4.1.2.1 gb
SRR6045910 Other lineage3.1 None
SRR6045925 Other lineage4.2 None
SRR6044936 Other lineage4 None
SRR6044993 Other lineage3 None
SRR6044957 Other lineage4.8.2 None
SRR6046020 Other lineage3 None
SRR6045163 Other lineage2.2.1 None
SRR6046159 Other lineage4.8.2 None
SRR6045159 Other lineage3.1.1 None
SRR6045308 Other lineage3.1.2.2 None
SRR6045288 Other lineage3 gb
SRR6045232 Other lineage4.1.1.3 gb
SRR6046456 Other lineage4.1.1.3.1 None
SRR6046359 Other lineage4.7 None
SRR6046223 Sensitive lineage3 gb
SRR6046534 Other lineage1.1.2 None
SRR6046460 HR-TB None
SRR6046528 Other lineage3.1.2.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046636 Other lineage4.3.1.1 gb
SRR6046729 Other None
SRR6046679 Other lineage3 gb
SRR6046739 Other lineage1.1.2 None
SRR6046779 Other lineage4.1.2.1 gb
ERR9117823 Other lineage1.1.1 None
SRR6367397 Other lineage4.1.2.1 None
SRR6153150 Other lineage3.1.1 None
ERR3148546 Other lineage4.3.2 None
ERR10796574 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR9117706 Other lineage4.4 None
ERR9117792 Other lineage1.1.2 None
SRR6153166 Other lineage1.2.1.2.1 ca
SRR6398097 Other lineage4.2.1.1 ca
SRR7131122 Other lineage2.2.1 None
SRR9971201 MDR-TB lineage4.4.1.1.1 None
ERR036207 Other lineage4.9 None
ERR9117827 Other lineage1.2.2.2 None
ERR9117837 Other lineage4.8.2 None
SRR10315640 MDR-TB lineage4.8 None
SRR10315705 MDR-TB lineage4.4.1.1.1 None