EBG00000313325 - n.843dupT
Drug resistance types
2 Sensitive
4 RR-TB
9 HR-TB
9 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
79 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 17 |
| lineage4.4.1.1 | 4 |
| lineage4.1.2.1 | 7 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1 | 13 |
| lineage4.1 | 2 |
| lineage4.2.2.2 | 6 |
| lineage4.7 | 1 |
| lineage3.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.8 | 8 |
| lineage4.3.4.2.1 | 3 |
| lineage4.8.2 | 1 |
| lineage4.6 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage4.9 | 4 |
| lineage4.2.1 | 5 |
| lineage1.1.2 | 2 |
| 1 | |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 2 |
| lineage4 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3;lineage4 | 1 |
| lineage4.3.3 | 3 |
| lineage3.1.3;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.2.2 | 1 |
| lineage4.6.2 | 1 |
| lineage4.2.1.1;lineage4.8 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2027292 | HR-TB | lineage3 | None | SRR6046521 | Other | lineage4.4.1.1 | None | ERR4817508 | Other | lineage4.1.2.1 | gb | SRR6398097 | Other | lineage4.2.1.1 | ca | ERR4820723 | Other | lineage4.4.1.1 | None | SRR10315705 | MDR-TB | lineage4.4.1.1.1 | None | ERR4815917 | Other | lineage2.2.1 | gb | SRR7070276 | Other | lineage3 | None | ERR4814841 | Other | lineage4.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342657 | HR-TB | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR21686114 | Other | lineage3.1.3 | None | SRR7069319 | Other | lineage4.5 | None | SRR7069981 | Other | lineage3 | None | SRR18002896 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815419 | Other | lineage4.8 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | SRR6046159 | Other | lineage4.8.2 | None | ERR4815502 | Other | lineage4.1 | None | ERR4819332 | Other | lineage3 | gb | ERR4817822 | Other | lineage4.6 | None | ERR4819630 | Other | lineage4.8 | gb | SRR6044993 | Other | lineage3 | None | SRR19304114 | Other | lineage1.2.1.2.1 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR2027248 | Other | lineage2.2.1 | None | SRR5007170 | Other | lineage4.9 | None | SRR7070256 | Other | lineage4.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4815795 | Other | lineage1.1.2 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4816690 | Other | None | SRR7069033 | Sensitive | lineage4.2.1 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | SRR6044936 | Other | lineage4.6 | None | SRR11342680 | Other | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR4818274 | Other | lineage4 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR3675287 | Other | lineage3 | None | SRR7069675 | Other | lineage3 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR7070022 | Other | lineage4.8 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR6046020 | Other | lineage3 | None | ERR4817131 | Other | lineage3.1.3;lineage4.9 | None | ERR4814497 | HR-TB | lineage4.6.2.2 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR2512849 | Other | lineage1.1.3.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR7069248 | Other | lineage4.1.1.3.1 | None | SRR6045705 | Other | lineage4.9 | None | ERR2509885 | Other | lineage3 | None | SRR7069074 | Other | lineage3 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR6046729 | Other | lineage3 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR2513401 | HR-TB | lineage3 | None | ERR2513401 | HR-TB | lineage3 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | SRR6045925 | Other | lineage4.2.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6045288 | Other | lineage3 | gb | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR5818612 | Other | lineage4.2.2.2 | None | ERR4817803 | Other | lineage4.2.2.2 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR7069091 | Other | lineage4.6.2 | None | ERR4818671 | Other | lineage4.8 | gb | SRR5007180 | Other | lineage2.2.1 | None | SRR7070602 | Other | lineage4.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | ERR4818977 | Other | lineage4.1.2.1 | None | SRR6045726 | Other | lineage3 | None | ERR3148546 | Other | lineage4.3.2 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR3276005 | Other | lineage4.1.2.1 | nl | ERR10796594 | Other | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR7069518 | Other | lineage4.8 | None |
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