EBG00000313325 - n.958T>C


Drug resistance types
56 Sensitive 5 RR-TB 36 HR-TB 14 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 10 Other
lineage Counts
lineage Count
lineage2.2.1 25
lineage4.9 12
lineage3.1.1 2
lineage4.3.4.2.1 13
lineage6.1.2 1
lineage2.2.2 18
lineage4.3.3 3
lineage4 2
lineage1.1.2 1
lineage2.2;lineage4 1
lineage4.6.1.2 1
lineage1.2.2.2 3
lineage3.1.2 1
lineage6.1.3 1
lineage2.2.2;lineage4 5
lineage3 2
lineage4.8 6
lineage2.1;lineage4.9 1
lineage4.4.2 4
lineage2.2.1;lineage2.2.2 3
lineage2.2.1;lineage4 1
lineage4.4.1.1 2
lineage4.1.2;lineage4.9 1
lineage4.1.1.3 1
lineage4.1.2.1 4
lineage4.3.4.2 2
lineage4.5 5
La1.6 1
lineage4.2.2.2 1
lineage4.2.1 2
lineage2.2.1.1 2
lineage2.2.1.1;lineage4 1
lineage4.1.1.1 2
lineage4.9.1 2
lineage1.2.2.1 1
lineage4.1.2 1
lineage4.3.4.1 1
lineage4.3.4.1;lineage4.9 1
lineage1.2.2.1;lineage4 1
M.canetti;lineage2.1 1
lineage1.1.3.2 1
spoligotype Counts
spoligotype Count
None 139
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1047993 HR-TB lineage2.2.1 None
SRR1173385 Sensitive lineage4.9 None
ERR181906 Sensitive lineage3.1.1 mw
ERR176489 Sensitive lineage4.3.4.2.1 None
ERR9787033 Sensitive lineage6.1.2 None
SRR6797751 MDR-TB lineage2.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
ERR176780 Sensitive lineage4.9 None
SRR1049004 HR-TB lineage2.2.2 None
SRR6785282 Other lineage4.3.3 None
ERR176801 Sensitive lineage4.3.4.2.1 mw
ERR176619 Sensitive lineage4.9 None
SRR1013609 Sensitive lineage4 None
SRR1013583 Sensitive lineage2.2.2 None
SAMN02360586 HR-TB lineage2.2.1 None
SRR1013633 MDR-TB lineage2.2.2 None
ERR126603 Sensitive lineage4.3.3 None
ERR1063888 HR-TB lineage1.1.2 None
SRR1048885 HR-TB lineage2.2;lineage4 None
ERR216910 Sensitive lineage4.3.4.2.1 None
SRR16156188 Sensitive lineage4.9 None
ERR6358728 MDR-TB lineage4.6.1.2 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR176814 Sensitive lineage4.3.4.2.1 mw
ERR161086 Sensitive lineage3.1.2 mw
ERR1334032 Other lineage6.1.3 None
ERR485006 HR-TB lineage4.9 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
ERR11465626 Sensitive lineage4.3.4.2.1 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048975 HR-TB lineage2.2.1 None
SAMN02360577 HR-TB lineage3 None
SRR1013581 Pre-XDR-TB lineage2.2.1 None
ERR11465829 Sensitive lineage4.9 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
ERR4820484 Sensitive lineage4.8 None
ERR736867 Other lineage2.1;lineage4.9 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR736818 Sensitive lineage4.3.3 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1048968 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1172710 Sensitive lineage1.2.2.2 None
ERR181771 Sensitive lineage3.1.1 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
ERR11465581 MDR-TB lineage4.4.1.1 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR22424765 HR-TB lineage4.8 None
SRR1013589 HR-TB lineage2.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1013613 Sensitive lineage2.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR987734 HR-TB lineage4.3.4.2 None
SRR1048995 HR-TB lineage4.5 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
ERR2229198 Sensitive lineage4.8 None
ERR4819784 Other lineage4.1.2.1 None
ERR10796559 Other lineage4.9 None
ERR4821811 Sensitive lineage4.9 None
SRR10993944 Other La1.6 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
ERR4828785 MDR-TB lineage4.1.2.1 None
ERR037485 Sensitive lineage4.3.4.2.1 mw
SRR1048998 HR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR6785301 Sensitive lineage2.2.1 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR4818869 Sensitive lineage4.2.2.2 None
ERR2179695 Sensitive lineage4.5 None
ERR245848 Sensitive lineage4.3.4.2.1 mw
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR1013610 Sensitive lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR1013600 Sensitive lineage2.2.1.1 None
SRR1048997 HR-TB lineage2.2.1 None
ERR036247 Sensitive lineage4.3.4.2.1 mw
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
ERR212015 Sensitive lineage4.8 None
SAMN02403610 MDR-TB lineage4.1.1.1 None
SRR11972175 Sensitive lineage2.2.1 None
ERR161113 Other lineage4.8 mw
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR190392 Sensitive lineage4.9.1 mw
SRR1013607 HR-TB lineage2.2.2 None
SRR10315558 RR-TB lineage2.2.1 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR176811 Sensitive lineage4.9.1 None
ERR163963 Sensitive lineage1.2.2.1 mw
SRR1172090 MDR-TB lineage4.4.1.1 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
SRR1013612 Sensitive lineage4.5 None
ERR8665802 MDR-TB lineage2.2.1 None
ERR036200 Sensitive lineage4.1.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR14334195 Other lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR1172177 HR-TB lineage4.1.1.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR037506 Sensitive lineage4.3.4.2.1 None
ERR773795 Sensitive lineage4.3.4.2 None
ERR176565 Sensitive lineage4.3.4.2.1 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1184308 RR-TB lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
ERR4811101 Other lineage4.4.2 None
ERR4769516 Sensitive lineage4.9 None
ERR212112 Sensitive lineage1.2.2.1;lineage4 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
ERR8773690 HR-TB lineage4.2.1 None
ERR221563 Sensitive lineage1.1.3.2 mw
SAMN02360585 HR-TB lineage4.5 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
ERR108125 RR-TB lineage4.9 None
ERR323061 Sensitive lineage4.9 None
SRR1013611 Sensitive lineage4.5 None
ERR216953 Sensitive lineage4.3.4.2.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013577 HR-TB lineage2.2.2 None
ERR037535 Sensitive lineage4.3.4.2.1 None
SRR1013596 Sensitive lineage3 None