EBG00000313325 - n.958T>C
Drug resistance types
52 Sensitive
2 RR-TB
71 HR-TB
37 MDR-TB
38 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 8 |
| lineage2.2.1 | 42 |
| lineage4.4.2 | 6 |
| lineage4 | 10 |
| lineage4.6.1.2 | 1 |
| lineage4.9 | 24 |
| lineage1.2.2.2 | 3 |
| lineage4.3.3 | 4 |
| 13 | |
| lineage4.3.4.2 | 2 |
| lineage4.2.1 | 3 |
| lineage4.1.2.1 | 4 |
| lineage6 | 1 |
| lineage2.2 | 23 |
| lineage2.2.2 | 19 |
| lineage2.2.1.1 | 3 |
| lineage4;lineage2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 3 |
| lineage4.9;lineage2 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.1.1 | 4 |
| lineage4.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.9.1 | 2 |
| lineage4.8 | 9 |
| lineage4.3.4.2.1 | 13 |
| lineage3.1.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.1 | 1 |
| La1.8.1 | 2 |
| lineage4.7 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.2 | 1 |
| La1.3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 227 |
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4796888 | Sensitive | lineage3 | in | ERR8665802 | MDR-TB | lineage2.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR6197036 | Other | lineage4 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR736867 | HR-TB | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR8773691 | HR-TB | lineage4.2.1 | None | ERR987766 | HR-TB | lineage4.3.3 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR8773690 | HR-TB | lineage4.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR987734 | HR-TB | lineage4.3.4.2 | None | SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013599 | HR-TB | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013618 | MDR-TB | None | SRR1013617 | MDR-TB | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048885 | MDR-TB | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048983 | HR-TB | None | SRR1048982 | HR-TB | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049041 | MDR-TB | None | SRR1049027 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR10993944 | Other | La1.6 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1169145 | MDR-TB | lineage4.1.1 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172090 | MDR-TB | lineage4.4.1.1 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR1173416 | Other | lineage4.9 | None | SRR1172713 | MDR-TB | lineage4.4 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173720 | Other | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR11972350 | MDR-TB | lineage2.2.1 | None | SRR14088357 | Sensitive | lineage3 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12199486 | Other | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | ERR4815183 | Sensitive | lineage4.1.1.3.1 | None | SRR19303775 | Other | lineage3 | None | SRR21576638 | MDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR19303773 | Other | lineage4.6.2.2 | None | ERR181906 | Sensitive | lineage3.1.1 | mw | ERR176811 | Sensitive | lineage4.9.1 | None | ERR4815268 | Other | lineage4.8 | None | ERR176801 | Sensitive | lineage4.3.4.2.1 | mw | ERR176814 | Sensitive | lineage4.3.4.2.1 | mw | ERR190392 | Sensitive | lineage4.9.1 | mw | ERR161113 | Other | lineage4.8 | mw | ERR161086 | Sensitive | lineage3.1.2 | mw | ERR163963 | Sensitive | lineage1.2.2.1 | mw | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR181771 | Sensitive | lineage3.1.1 | None | ERR176740 | HR-TB | None | ERR176489 | Sensitive | lineage4.3.4.2.1 | None | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR4815986 | Sensitive | lineage4.9 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR4817342 | Other | lineage4.1.1 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR212035 | Sensitive | lineage4.3.4.2.1 | None | ERR212015 | Sensitive | lineage4.8 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR4816481 | Other | lineage4.8 | gb | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR216953 | Sensitive | lineage4.3.4.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR221563 | Sensitive | lineage1.1.3.2 | mw | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818526 | Sensitive | lineage3 | None | ERR4818869 | Other | lineage4.2.2.2 | None | ERR245848 | Sensitive | lineage4.3.4.2.1 | mw | ERR2179695 | Sensitive | lineage4.5 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR4819098 | Sensitive | lineage4.8 | None | SAMN02403610 | MDR-TB | lineage4.1.1.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821776 | Sensitive | lineage4.2.2.2 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | ERR2514226 | Sensitive | lineage2.2.1 | gb | ERR4820484 | Other | lineage4.8 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5382721 | Other | La1.8.1 | None | ERR2652993 | MDR-TB | lineage4.7 | None | ERR4821812 | Other | lineage4.8 | gb | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR4828514 | HR-TB | lineage2.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | ERR4828785 | MDR-TB | lineage4.1.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323041 | HR-TB | None | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR1063888 | HR-TB | lineage1.1.2 | None | ERR10796557 | Other | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR10796612 | HR-TB | lineage4.3.2 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4627376 | Other | La1.8.1 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769539 | Sensitive | lineage4.9 | None |
|---|
