EBG00000313325 - n.958T>C


Drug resistance types
52 Sensitive 2 RR-TB 71 HR-TB 37 MDR-TB 38 Pre-XDR-TB 0 XDR-TB 27 Other
lineage Counts
lineage Count
lineage3 8
lineage2.2.1 42
lineage4.4.2 6
lineage4 10
lineage4.6.1.2 1
lineage4.9 24
lineage1.2.2.2 3
lineage4.3.3 4
13
lineage4.3.4.2 2
lineage4.2.1 3
lineage4.1.2.1 4
lineage6 1
lineage2.2 23
lineage2.2.2 19
lineage2.2.1.1 3
lineage4;lineage2.2.2 1
lineage2.2.2;lineage2.2.1 2
lineage4.5 3
lineage4.9;lineage2 1
La1.6 1
lineage4.4.1.1 3
lineage4.1.1 4
lineage4.4 1
lineage4.1.1.3.1 1
lineage4.6.2.2 1
lineage3.1.1 2
lineage4.9.1 2
lineage4.8 9
lineage4.3.4.2.1 13
lineage3.1.2 1
lineage1.2.2.1 1
lineage4;lineage1.2.2.1 1
lineage1.1.3.2 1
lineage4.2.2.2 2
lineage4.1.1.1 1
La1.8.1 2
lineage4.7 1
lineage4.1.1.3 1
lineage4.3.4.1 1
lineage4.1.2 1
lineage1.1.2 1
lineage4.3.2 1
La1.3 2
spoligotype Counts
spoligotype Count
None 227
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4796888 Sensitive lineage3 in
ERR8665802 MDR-TB lineage2.2.1 None
ERR4811101 Other lineage4.4.2 None
ERR6197036 Other lineage4 None
ERR6358728 MDR-TB lineage4.6.1.2 None
ERR6359064 Sensitive lineage4.9 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR736818 Sensitive lineage4.3.3 None
ERR736867 HR-TB None
ERR773795 Sensitive lineage4.3.4.2 None
ERR8773691 HR-TB lineage4.2.1 None
ERR987766 HR-TB lineage4.3.3 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR8773690 HR-TB lineage4.2.1 None
ERR9787033 Sensitive lineage6 None
ERR987734 HR-TB lineage4.3.4.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013583 HR-TB lineage2.2 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013596 HR-TB lineage3 None
SRR1013595 HR-TB lineage3 None
SRR1013598 HR-TB None
SRR1013597 HR-TB lineage2.2 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013607 HR-TB lineage2.2 None
SRR1013599 HR-TB None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013608 HR-TB lineage2.2 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013610 HR-TB lineage4 None
SRR1013609 HR-TB lineage4 None
SRR1013611 HR-TB lineage4 None
SRR1013614 HR-TB lineage2.2 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013618 MDR-TB None
SRR1013617 MDR-TB None
SRR1013612 HR-TB lineage4 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR1013633 MDR-TB lineage2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048885 MDR-TB None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048980 HR-TB lineage3 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048983 HR-TB None
SRR1048982 HR-TB None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048995 HR-TB lineage4.5 None
SRR1048993 HR-TB lineage4.9 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1048994 HR-TB lineage4.9 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049026 Pre-XDR-TB None
SRR1049023 HR-TB lineage2.2 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049041 MDR-TB None
SRR1049027 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR10993944 Other La1.6 None
SRR1144759 MDR-TB lineage2.2 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1169150 MDR-TB lineage4.4.1.1 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1169145 MDR-TB lineage4.1.1 None
SRR1172710 Sensitive lineage1.2.2.2 None
SRR1172090 MDR-TB lineage4.4.1.1 None
SRR1172177 MDR-TB lineage4.1.1 None
SRR1173416 Other lineage4.9 None
SRR1172713 MDR-TB lineage4.4 None
SRR1173385 Sensitive lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173720 Other lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR11972350 MDR-TB lineage2.2.1 None
SRR14088357 Sensitive lineage3 None
SRR12199409 Other lineage1.2.2.2 None
SRR12199486 Other lineage2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR16156188 HR-TB lineage4.9 None
ERR4815183 Sensitive lineage4.1.1.3.1 None
SRR19303775 Other lineage3 None
SRR21576638 MDR-TB lineage2.2.1 None
SRR22424765 MDR-TB lineage4 None
ERR176780 Sensitive lineage4.9 None
SRR19303773 Other lineage4.6.2.2 None
ERR181906 Sensitive lineage3.1.1 mw
ERR176811 Sensitive lineage4.9.1 None
ERR4815268 Other lineage4.8 None
ERR176801 Sensitive lineage4.3.4.2.1 mw
ERR176814 Sensitive lineage4.3.4.2.1 mw
ERR190392 Sensitive lineage4.9.1 mw
ERR161113 Other lineage4.8 mw
ERR161086 Sensitive lineage3.1.2 mw
ERR163963 Sensitive lineage1.2.2.1 mw
SAMN02360583 HR-TB lineage2.2.2 None
ERR181771 Sensitive lineage3.1.1 None
ERR176740 HR-TB None
ERR176489 Sensitive lineage4.3.4.2.1 None
ERR176565 Sensitive lineage4.3.4.2.1 None
ERR176619 Sensitive lineage4.9 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR4815986 Sensitive lineage4.9 None
ERR2446456 HR-TB lineage4.4.1.1 None
ERR4817342 Other lineage4.1.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR212035 Sensitive lineage4.3.4.2.1 None
ERR212015 Sensitive lineage4.8 None
ERR2229198 MDR-TB lineage4.8 None
ERR212112 Sensitive lineage4;lineage1.2.2.1 None
ERR4816481 Other lineage4.8 gb
ERR216910 Sensitive lineage4.3.4.2.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR216953 Sensitive lineage4.3.4.2.1 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
SAMN02360586 HR-TB lineage2.2.1 None
ERR221563 Sensitive lineage1.1.3.2 mw
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR2512443 Other lineage4.8 gb
ERR4818526 Sensitive lineage3 None
ERR4818869 Other lineage4.2.2.2 None
ERR245848 Sensitive lineage4.3.4.2.1 mw
ERR2179695 Sensitive lineage4.5 None
SAMN02360577 HR-TB lineage3 None
ERR4819098 Sensitive lineage4.8 None
SAMN02403610 MDR-TB lineage4.1.1.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR4821776 Sensitive lineage4.2.2.2 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
ERR2514226 Sensitive lineage2.2.1 gb
ERR4820484 Other lineage4.8 None
ERR4819784 Other lineage4.1.2.1 None
SAMN02360585 HR-TB lineage4.5 None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
ERR4821811 RR-TB lineage4.9 None
SRR5382721 Other La1.8.1 None
ERR2652993 MDR-TB lineage4.7 None
ERR4821812 Other lineage4.8 gb
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR4828514 HR-TB lineage2.2.1 None
SRR6044936 Other lineage4 None
SRR6797751 MDR-TB lineage2.2.1 None
ERR4828785 MDR-TB lineage4.1.2.1 None
ERR485006 HR-TB lineage4.9 None
SRR6785282 Other lineage4.3.3 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982246 Sensitive lineage4 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR4831863 HR-TB lineage2.2.1.1 None
ERR323061 Sensitive lineage4.9 None
ERR323041 HR-TB None
ERR037506 Sensitive lineage4.3.4.2.1 None
ERR036200 Sensitive lineage4.1.2 None
ERR037485 Sensitive lineage4.3.4.2.1 mw
ERR036247 Sensitive lineage4.3.4.2.1 mw
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR10796558 Sensitive lineage4 None
ERR1063888 HR-TB lineage1.1.2 None
ERR10796557 Other lineage4 None
ERR3283033 Sensitive lineage4.9 None
ERR10796559 Other lineage4.9 None
ERR126603 Sensitive lineage4.3.3 None
ERR10796612 HR-TB lineage4.3.2 None
ERR10796623 Other lineage4.1.1 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283046 MDR-TB lineage4.9 None
ERR4769517 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4627376 Other La1.8.1 None
ERR4769518 Sensitive lineage4.9 None
ERR4769539 Sensitive lineage4.9 None