EBG00000313325 - n.830_832delTCCinsCCT
Drug resistance types
1 Sensitive
0 RR-TB
5 HR-TB
7 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1;lineage4 | 1 |
| lineage4.3.3 | 5 |
| lineage4.9 | 3 |
| lineage4.8 | 5 |
| lineage4.7 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2.2.1 | 7 |
| lineage4.4.1.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3 | 12 |
| lineage4.3 | 1 |
| lineage1.2.2.2 | 3 |
| lineage3.1.2 | 2 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.1 | 3 |
| La3 | 1 |
| lineage4.3.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.4.2 | 1 |
| lineage4.2.1.1;lineage4.8 | 1 |
| lineage4.8.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR6045485 | Other | lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | SRR3675491 | Other | lineage4.7 | None | SRR7070383 | Other | lineage4.1.2.1 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR11349196 | MDR-TB | lineage2.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR6046359 | Other | lineage4.7 | None | SRR7069319 | Other | lineage4.5 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR7069074 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR6044993 | Other | lineage3 | None | SRR7069760 | Other | lineage3 | None | SRR11342646 | HR-TB | lineage3 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045726 | Other | lineage3 | None | SRR3675288 | Other | lineage3 | None | SRR11342680 | Other | lineage4.8 | None | ERR4818663 | Other | lineage3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR6045110 | Other | lineage3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR3675287 | Other | lineage3 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR7069082 | Other | lineage4.1.2.1 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR6045178 | Other | lineage3 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR10321138 | Other | La3 | None | SRR3675562 | Other | lineage4.3.1 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR2027293 | Other | lineage4.3.4.2 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR6046210 | Other | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR7069946 | Other | lineage4.8 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR7069013 | Other | lineage4.8 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR3675452 | Other | lineage3 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867566 | Other | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | SRR11342692 | MDR-TB | lineage2.2.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046398 | Sensitive | lineage4.1.1.3.1 | gb | ERR4815795 | Other | lineage1.1.2 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None |
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