Rv1644 - c.-138C>G


Drug resistance types
2 Sensitive 5 RR-TB 46 HR-TB 13 MDR-TB 6 Pre-XDR-TB 2 XDR-TB 45 Other
lineage Counts
lineage Count
lineage4 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.1;lineage4.9 11
lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.9 1
lineage4.9 19
lineage2.2.2 4
La1.7;lineage4.9 3
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.2.1 2
lineage4.9.1 1
La3;lineage2 1
lineage2.1;lineage4.9;lineage6.3 8
lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
7
lineage3 1
La1.2.BCG;La1.8.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 3
La1.7;M.canetti;lineage4.9 2
La1.7 1
La1;lineage4.9 1
lineage4.1.3 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.2.1 2
M.canetti;lineage4.9 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage1.1.3.1 1
lineage4.9;lineage6.3 2
lineage1.1.2 1
La3;lineage2.1;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
lineage2.1;lineage6.3 2
lineage2.1 2
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2.1;lineage6.3 1
La1.2;La1.8.1 1
lineage3.1.2.2 1
lineage4.6.3;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.2 2
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 119
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283044 Other lineage4 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR11567812 Pre-XDR-TB lineage2.2.2 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR11567813 Pre-XDR-TB lineage2.2.2 None
ERR4817731 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8651615 Pre-XDR-TB lineage2.2.2 cn
ERR3283036 Other lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR11466062 Sensitive lineage4.9.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR25827682 Other None
SRR3675236 Other None
SRR3675441 RR-TB lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4830353 HR-TB La1.7 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR11567814 Pre-XDR-TB lineage2.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR9786843 Other None
SRR18213713 HR-TB None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1175074 Other None
ERR234659 HR-TB None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693252 HR-TB lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None