EBG00000313339 - n.2700T>A


Drug resistance types
157 Sensitive 8 RR-TB 58 HR-TB 39 MDR-TB 26 Pre-XDR-TB 1 XDR-TB 86 Other
lineage Counts
lineage Count
lineage4.9 173
lineage2.2.1 41
lineage4.4.1.1 11
lineage2.2.2 24
lineage3 12
lineage2.2.1;lineage2.2.2 6
lineage4.6.1.2 3
lineage4.6.2.2 4
lineage4.5 5
lineage4.6.1.1 13
lineage2.2;lineage4 2
lineage4.3.4.2.1 10
lineage2.2.2;lineage4.9 2
lineage4.2.2.2 1
lineage4.8.1 2
lineage4.1.2.1 9
lineage2.2.2;lineage4 7
lineage4 3
lineage2.2.1.1;lineage4 1
La1.7.1 1
lineage2;lineage4.9 2
lineage4.4.2 4
lineage5.1.1 5
lineage4.4.1.2 1
lineage4.3.1.1 1
lineage2.2.1;lineage4.2.2;lineage4.4.2 1
lineage2.2;lineage4.9 2
lineage2.2.1.1 5
lineage2.2.1;lineage4 4
lineage4.4 1
lineage4.8 5
lineage4.3.3 3
La1.8.1 2
lineage6.2.1 1
lineage4.3.4.1 1
lineage2 1
lineage6.3.1 1
lineage2.2.1.1;lineage4.6.1 2
lineage4.1.1.3 1
lineage1.1.3.1 1
lineage5.1.2 1
spoligotype Counts
spoligotype Count
None 375
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180228 Other lineage4.9 None
SRR15368751 Sensitive lineage2.2.1 None
SRR1180021 Sensitive lineage4.9 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1183427 Sensitive lineage4.9 None
SRR1180494 Sensitive lineage4.9 None
SRR1181176 Other lineage4.9 None
SAMN02381009 MDR-TB lineage4.4.1.1 None
SRR1183276 Other lineage4.9 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1181590 Sensitive lineage4.9 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1180786 Sensitive lineage4.9 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1013613 Sensitive lineage2.2.1 None
ERR752034 Sensitive lineage2.2.1 None
SRR1183297 Other lineage4.9 None
ERR3283015 Sensitive lineage4.9 None
SRR1180123 Sensitive lineage4.9 None
SRR15368707 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1183688 Sensitive lineage4.9 None
ERR751317 Sensitive lineage4.9 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR1182992 Other lineage4.9 None
SRR1183418 Other lineage4.9 None
SAMN02381051 RR-TB lineage4.6.1.2 None
ERR3275548 Sensitive lineage3 nl
SRR1183102 Sensitive lineage4.9 None
SRR1183616 Other lineage4.9 None
ERR4872099 MDR-TB lineage4.6.2.2 None
SRR1183726 Sensitive lineage4.9 None
SRR1048995 HR-TB lineage4.5 None
ERR192070 Sensitive lineage4.9 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1183718 Sensitive lineage4.9 None
SRR1049743 Sensitive lineage4.6.1.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR1013633 MDR-TB lineage2.2.2 None
SRR1181272 Sensitive lineage4.9 None
SRR1048885 HR-TB lineage2.2;lineage4 None
SRR1180124 Sensitive lineage4.9 None
ERR10796559 Other lineage4.9 None
SRR1183504 Sensitive lineage4.9 None
ERR3283049 Sensitive lineage4.9 None
SRR1183021 Other lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR1048993 HR-TB lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR1183014 Sensitive lineage4.9 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1049022 HR-TB lineage2.2.2;lineage4.9 None
SRR1183716 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR2515055 Sensitive lineage3 None
SRR1183180 Other lineage4.9 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
SRR11342675 Pre-XDR-TB lineage4.8.1 None
SRR1049744 Sensitive lineage4.6.1.1 None
SRR1181487 Sensitive lineage4.9 None
SRR1181588 Sensitive lineage4.9 None
SRR1049622 MDR-TB lineage4.4.1.1 None
SRR1183149 Other lineage4.9 None
ERR4819622 Other lineage4.1.2.1 None
SRR1183543 Sensitive lineage4.9 None
SRR1048886 HR-TB lineage2.2.2;lineage4 None
SRR1180587 Sensitive lineage4.9 None
ERR2517457 Sensitive lineage3 None
SRR16100231 Other lineage4 None
SRR1180497 Sensitive lineage4.9 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1183709 Other lineage4.9 None
SRR5217421 Sensitive lineage2.2.1 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1181519 Sensitive lineage4.9 None
ERR4829238 Sensitive lineage3 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1048992 HR-TB lineage2.2;lineage4 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR1181270 Sensitive lineage4.9 None
SRR1049736 Sensitive lineage4.9 None
SRR1180467 Sensitive lineage4.9 None
SRR1183129 Other lineage4.9 None
SRR1048981 HR-TB lineage3 None
ERR4818128 Other lineage4.1.2.1 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR4819430 Sensitive lineage4.1.2.1 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR1181514 Sensitive lineage4.9 None
SRR1180782 Other lineage4.9 None
SRR1180026 Sensitive lineage4.9 None
SRR1183485 Other lineage4.9 None
SAMN02360585 HR-TB lineage4.5 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR1183151 Sensitive lineage4.9 None
SRR1183294 Sensitive lineage4.9 None
SRR1049023 HR-TB lineage4.9 None
SRR1183450 Other lineage4.9 None
SAMN02381047 Sensitive lineage4.6.1.1 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1013602 HR-TB lineage2.2.1 None
SRR18002888 RR-TB lineage2.2.1 None
SRR1183185 Other lineage4.9 None
SRR1013611 Sensitive lineage4.5 None
SRR1013634 MDR-TB lineage2.2.2 None
SRR1180119 Other lineage4.9 None
SRR1183538 Other lineage4.9 None
SRR18053779 Other La1.7.1 None
SRR1049629 MDR-TB lineage4.4.1.1 None
SRR1183600 Sensitive lineage4.9 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR4819641 Other lineage4.6.2.2 None
SRR1180752 Other lineage4.9 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR6046609 Sensitive lineage4.9 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1183476 Sensitive lineage4.9 None
SRR1183345 Sensitive lineage4.9 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
ERR751329 Sensitive lineage5.1.1 None
SRR1013596 Sensitive lineage3 None
SRR1181224 Other lineage4.9 None
SRR15508558 Sensitive lineage4.1.2.1 None
SRR1183683 Sensitive lineage4.9 None
ERR181733 Sensitive lineage4.3.4.2.1 None
SRR1208850 Other lineage4.9 None
SRR1183016 Sensitive lineage4.9 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SRR1181486 Sensitive lineage4.9 None
SRR1183231 Other lineage4.9 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR1144809 HR-TB lineage2.2.1 None
ERR3797084 Sensitive lineage4.9 None
SRR1062937 Sensitive lineage4.6.1.1 None
SRR7070469 Other lineage4.3.1.1 None
SRR1013614 Sensitive lineage2.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR1180729 Sensitive lineage4.9 None
SRR1180801 Other lineage4.9 None
SRR18002873 Pre-XDR-TB lineage2.2.1;lineage4.2.2;lineage4.4.2 None
SRR1181190 Sensitive lineage4.9 None
SRR1183664 Other lineage4.9 None
SRR1048996 Sensitive lineage4.5 None
SRR1183259 Sensitive lineage4.9 None
SRR1180612 Other lineage4.9 None
SRR1013583 Sensitive lineage2.2.2 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
SRR1048983 HR-TB lineage2.2.1.1 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1183396 Sensitive lineage4.9 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1049624 MDR-TB lineage4.3.4.2.1 None
SRR1180653 Sensitive lineage4.9 None
SAMN02360590 MDR-TB lineage2.2.2 None
SRR1183451 Sensitive lineage4.9 None
SRR1173720 Sensitive lineage4.9 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1183482 Other lineage4.9 None
SRR18002911 Sensitive lineage2.2.1;lineage4 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1140751 MDR-TB lineage4.4.1.1 None
ERR751330 MDR-TB lineage5.1.1 None
SRR1048982 HR-TB lineage2.2.1.1 None
SRR1172713 MDR-TB lineage4.4 None
SRR19303788 Sensitive lineage4.8 None
ERR067664 Sensitive lineage4.3.3 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
ERR3468578 Sensitive La1.8.1 None
SRR1183292 Sensitive lineage4.9 None
SRR1140677 MDR-TB lineage4.6.1.1 None
ERR4820829 Other lineage4.8 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
SAMN02360580 HR-TB lineage2.2.1 None
SRR1181597 Other lineage4.9 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1183449 Sensitive lineage4.9 None
ERR751332 Sensitive lineage6.2.1 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR1183614 Sensitive lineage4.9 None
SRR1048986 HR-TB lineage2.2.1 None
SRR18002971 Other lineage2.2.1 None
SRR1180213 Other lineage4.9 None
SAMN02360577 HR-TB lineage3 None
SRR1013581 Pre-XDR-TB lineage2.2.1 None
SRR1180014 Sensitive lineage4.9 None
SRR1183335 Other lineage4.9 None
SRR1181489 Sensitive lineage4.9 None
SRR1013610 Sensitive lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR19303792 Sensitive lineage4.1.2.1 None
SRR1183599 Sensitive lineage4.9 None
SRR1140586 Sensitive lineage4.9 None
SRR6785195 Sensitive lineage2.2.1 None
SRR1049735 Sensitive lineage4.9 None
SRR1180476 Sensitive lineage4.9 None
SRR1048853 HR-TB lineage2;lineage4.9 None
SRR1062898 MDR-TB lineage4.3.4.2.1 None
ERR4820075 Other lineage4.1.2.1 None
SRR1180594 Sensitive lineage4.9 None
SRR1181572 Sensitive lineage4.9 None
SAMN02381010 MDR-TB lineage4.3.4.2.1 None
ERR3283013 Sensitive lineage4.9 None
ERR4821054 Sensitive lineage3 None
SRR1183024 Sensitive lineage4.9 None
SRR11349133 MDR-TB lineage4.3.3 None
SRR1180466 Sensitive lineage4.9 None
SRR1183619 Other lineage4.9 None
SRR1180101 Sensitive lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
SRR1181508 Sensitive lineage4.9 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1049625 MDR-TB lineage4.3.4.2.1 None
ERR2747678 Sensitive La1.8.1 None
SRR1180048 Other lineage4.9 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SRR1183695 Sensitive lineage4.9 None
SRR1013553 MDR-TB lineage2.2.2 None
SRR1181189 Other lineage4.9 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
SRR1049752 RR-TB lineage4.6.1.2 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR1013607 HR-TB lineage2.2.2 None
SRR1180667 Other lineage4.9 None
SRR1181575 Other lineage4.9 None
SRR1062897 MDR-TB lineage4.4.1.1 None
SRR19303773 Other lineage4.6.2.2 None
SRR1181495 Sensitive lineage4.9 None
SRR1180599 Other lineage4.9 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR5865379 Pre-XDR-TB lineage2.2.1 None
SRR1140750 MDR-TB lineage4.3.4.2.1 None
SRR1140627 Sensitive lineage4.6.1.1 None
SRR1048965 HR-TB lineage2.2.1 None
ERR2446544 Sensitive lineage3 nl
SRR1173416 Sensitive lineage4.9 None
SRR1183200 Sensitive lineage4.9 None
SRR1183075 Sensitive lineage4.9 None
SRR1013612 Sensitive lineage4.5 None
SRR1181428 Other lineage4.9 None
ERR751336 Sensitive lineage5.1.1 None
SRR15368784 Sensitive lineage2.2.1.1 None
SRR6046834 Sensitive lineage4.9 None
ERR10796599 Other lineage4.8 None
SRR1048994 HR-TB lineage4.9 None
SAMN02381005 Sensitive lineage4.6.1.1 None
SAMN02381037 MDR-TB lineage4.6.1.1 None
SRR1047993 HR-TB lineage2.2.1 None
SRR18511647 Sensitive lineage2.2.1 None
ERR4821372 Other lineage4.1.2.1 None
SRR1208264 Sensitive lineage4.9 None
ERR473279 Other lineage4.9 None
SRR1062933 Sensitive lineage4.9 None
SRR1183302 Other lineage4.9 None
SRR1048852 HR-TB lineage2.2;lineage4.9 None
SRR1181594 Sensitive lineage4.9 None
SRR1182924 Sensitive lineage4.9 None
SRR1181586 Sensitive lineage4.9 None
SRR1183382 Sensitive lineage4.9 None
SRR1180475 Sensitive lineage4.9 None
SRR1183316 Sensitive lineage4.9 None
ERR212028 Sensitive lineage4.3.4.1 None
SRR1049004 HR-TB lineage2.2.2 None
SRR1062927 MDR-TB lineage4.6.1.1 None
SRR10315476 MDR-TB lineage4.8 None
SRR19303775 Sensitive lineage3 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1181579 Sensitive lineage4.9 None
SRR7131160 Sensitive lineage3 None
SRR1013609 Sensitive lineage4 None
SRR3742667 Sensitive lineage4.9 None
SRR1183500 Other lineage4.9 None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1180103 Sensitive lineage4.9 None
ERR4819784 Other lineage4.1.2.1 None
SRR1209032 Sensitive lineage4.9 None
SRR1180091 Other lineage4.9 None
ERR10796555 Other lineage4.1.2.1 None
SRR1183188 Other lineage4.9 None
SRR1208369 Other lineage4.9 None
SRR1049040 HR-TB lineage2 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1181195 Sensitive lineage4.9 None
ERR4819242 HR-TB lineage4.6.2.2 None
SRR1183236 Sensitive lineage4.9 None
SRR1181268 Other lineage4.9 None
SRR1180115 Other lineage4.9 None
SRR1183356 Sensitive lineage4.9 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1180214 Sensitive lineage4.9 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SRR1062895 Sensitive lineage4.6.1.1 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
ERR4819096 Other lineage4.4.1.1 None
SRR1013584 HR-TB lineage2.2.2 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
SRR1182919 Sensitive lineage4.9 None
SRR1013608 Sensitive lineage2.2.2 None
ERR4818440 Other lineage6.3.1 None
SRR1183442 Other lineage4.9 None
SRR1173415 MDR-TB lineage2.2.1.1;lineage4.6.1 None
SRR1183708 Other lineage4.9 None
SRR1180555 Other lineage4.9 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR1182951 Other lineage4.9 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR1180192 Other lineage4.9 None
SRR1183430 Other lineage4.9 None
SRR1183475 Sensitive lineage4.9 None
SRR1183359 Other lineage4.9 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1181143 Other lineage4.9 None
SRR1180642 Sensitive lineage4.9 None
SRR1182903 Sensitive lineage4.9 None
SRR1180661 Sensitive lineage4.9 None
ERR3283051 Other lineage4.9 None
SRR1180107 Sensitive lineage4.9 None
SRR1181200 Sensitive lineage4.9 None
SRR18002950 MDR-TB lineage2.2.1 None
SRR15316299 Sensitive lineage2.2.1 None
SRR1062902 MDR-TB lineage4.4.1.1 None
SRR11349134 Pre-XDR-TB lineage4.8.1 None
SRR1013600 Sensitive lineage2.2.1.1 None
SRR1183179 Other lineage4.9 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1048997 HR-TB lineage2.2.1 None
ERR751338 Other lineage5.1.1 None
SRR19303779 Sensitive lineage4.8 None
SRR1182916 Sensitive lineage4.9 None
SRR1180519 Other lineage4.9 None
SRR1180196 Other lineage4.9 None
SRR1180105 Other lineage4.9 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1049723 MDR-TB lineage4.6.1.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
SRR1049724 MDR-TB lineage4.6.1.1 None
SRR1182909 Other lineage4.9 None
SRR1173245 MDR-TB lineage2.2.1.1;lineage4.6.1 None
SRR1180220 Sensitive lineage4.9 None
SRR1181303 Other lineage4.9 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1180659 Sensitive lineage4.9 None
SRR1048968 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1183300 Other lineage4.9 None
SRR17567930 Sensitive lineage4.4.1.1 None
SRR1183395 Other lineage4.9 None
SRR6650411 Sensitive lineage1.1.3.1 None
SRR1183138 Other lineage4.9 None
SRR1182971 Sensitive lineage4.9 None
ERR3283008 Other lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR1182891 Other lineage4.9 None
SRR1181581 Sensitive lineage4.9 None
SRR1182955 Sensitive lineage4.9 None
SRR1183705 Other lineage4.9 None
ERR751339 Sensitive lineage5.1.2 None
SRR18003048 XDR-TB lineage2.2.1 None
SRR1181500 Sensitive lineage4.9 None
SRR1181245 Other lineage4.9 None
SRR1181359 Sensitive lineage4.9 None
SRR1048966 MDR-TB lineage2.2.1 None
SRR1180154 Other lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
ERR751328 Sensitive lineage5.1.1 None
ERR2693237 Sensitive lineage4.9 None
ERR5865378 Pre-XDR-TB lineage2.2.1 None
SRR1180771 Sensitive lineage4.9 None