EBG00000313339 - n.2964C>T
Drug resistance types
88 Sensitive
5 RR-TB
7 HR-TB
10 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 20 |
| 7 | |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 2 |
| La1.8.1 | 4 |
| lineage4.9 | 26 |
| lineage1.2.1.2.1 | 1 |
| La1.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2 | 3 |
| lineage4.3.4.1 | 4 |
| lineage6.1.3 | 1 |
| La1.6 | 1 |
| lineage4.3.2 | 1 |
| La1.7.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 9 |
| lineage4.3.2.1 | 7 |
| lineage4.8 | 4 |
| lineage1.1.3.2 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1 | 6 |
| lineage4.1.2 | 3 |
| lineage4.3.3 | 6 |
| lineage3.1.1 | 4 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.9.1 | 1 |
| lineage3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4 | 3 |
| lineage4.8.1 | 1 |
| lineage4.4 | 1 |
| lineage1 | 1 |
| lineage4.7 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.3 | 1 |
| lineage4;lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 144 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR144568 | Pre-XDR-TB | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR4187995 | Other | La1.8.1 | None | ERR473279 | Other | lineage4.9 | None | ERR4188066 | Other | La1.8.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR6336806 | Sensitive | lineage1.2.1.2.1 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | SRR13199734 | Other | La1.2 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR1181136 | Sensitive | lineage2.2 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | ERR9787079 | Other | lineage6.1.3 | None | SRR10993953 | Other | La1.6 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR16151359 | MDR-TB | lineage4.3.2 | None | SRR1792232 | Other | La1.7.1 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | ERR216901 | Other | lineage3.1.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR181940 | Sensitive | lineage3.1.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR216928 | Other | lineage4.9.1 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR5152904 | Other | lineage2.2.1 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6982078 | Sensitive | None | ERR502483 | Sensitive | lineage4.9 | None | SRR6982405 | Sensitive | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982196 | Sensitive | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981912 | Sensitive | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981962 | Sensitive | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982070 | RR-TB | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR8599999 | Other | La1.8.1 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None |
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