Rv0006 - c.189C>T
Drug resistance types
9 Sensitive
2 RR-TB
74 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| 60 | |
| lineage4.1.2.1 | 7 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4 | 6 |
| lineage4.3.2 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.9 | 6 |
| lineage1.2.1.2.1 | 1 |
| La1.8.1 | 2 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1 | 4 |
| lineage3 | 1 |
| lineage3.1 | 2 |
| lineage1.1 | 1 |
| lineage2.2 | 3 |
| lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8976043 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6865387 | Sensitive | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119669 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | ERR9787030 | Sensitive | lineage6 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861241 | HR-TB | lineage4.9 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR6325445 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675222 | Other | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675501 | HR-TB | None | SRR3675550 | Other | None | ERR176651 | HR-TB | None | ERR4815084 | Sensitive | lineage4.8 | gb | SRR3675545 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675510 | Other | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR6045952 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341456 | Other | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | SRR6045519 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323041 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7585440 | Sensitive | lineage2.2.1 | in | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323043 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1063857 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR4178237 | Sensitive | lineage4.1.2.1 | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None |
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