EBG00000313325 - n.842_843insC
Drug resistance types
2 Sensitive
3 RR-TB
7 HR-TB
18 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
77 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.2.2.2 | 4 |
| lineage4.8 | 6 |
| lineage4.7 | 3 |
| lineage3 | 12 |
| lineage4.3.3 | 7 |
| lineage4.5 | 2 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1 | 21 |
| lineage4.9 | 8 |
| lineage4.4.1.1.1 | 3 |
| lineage3.1.2 | 3 |
| lineage2.2.1.2 | 1 |
| lineage1.1.3 | 1 |
| lineage6.1.3 | 3 |
| lineage4.2.1 | 1 |
| lineage4.3.1.1 | 4 |
| lineage1.1.1.1 | 1 |
| lineage4.3.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4.1.1.3.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.2.1.1 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.6 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage3.1.1 | 1 |
| lineage4.3.2 | 1 |
| La3 | 1 |
| lineage4.8.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage1.1.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR4815040 | Other | lineage4.2.2.2 | None | SRR6046189 | Other | lineage4.8 | None | SRR3675491 | Other | lineage4.7 | None | SRR5007182 | MDR-TB | lineage3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR5818610 | Other | lineage3 | None | ERR4821849 | Other | lineage4.5 | gb | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | ERR867571 | Other | lineage4.9 | None | SRR11349138 | MDR-TB | lineage4.4.1.1.1 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR3675225 | Other | lineage2.2.1.2 | None | SRR7069523 | Other | lineage1.1.3 | None | SRR7069319 | Other | lineage4.5 | None | ERR4192556 | Other | lineage6.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4820187 | Other | lineage4.3.3 | None | ERR2512986 | Other | lineage3 | None | ERR2512986 | Other | lineage3 | None | SRR6045485 | Other | lineage4.9 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | ERR4821085 | Other | lineage2.2.1 | None | SRR6045110 | Other | lineage3 | None | SRR3675220 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR7070446 | Other | lineage3 | None | SRR7068923 | Other | lineage3 | None | SRR6046612 | Other | lineage1.1.1.1 | None | ERR867573 | Other | lineage4.9 | None | SRR10315499 | MDR-TB | lineage2.2.1 | None | SRR6153170 | Other | lineage4.9 | ca | SRR18002960 | XDR-TB | lineage2.2.1 | None | SRR3675562 | Other | lineage4.3.1 | None | ERR2027293 | Other | lineage4.3.4.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR10796595 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR12062547 | HR-TB | lineage2.2.1 | None | ERR4192398 | Other | lineage6.1.3 | None | SRR7069174 | Other | lineage4.3.3 | None | SRR5007170 | Other | lineage4.9 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR3675512 | Other | lineage2.2.1 | None | SRR7069880 | MDR-TB | lineage3 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR10315674 | MDR-TB | lineage2.2.1 | None | SRR1173521 | Other | lineage4.9 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SRR19303964 | Other | lineage4.7 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7070320 | Other | lineage4.8 | None | SRR6046291 | Other | lineage3 | None | SRR1140942 | Other | lineage2.2.1;lineage4 | None | SRR7070170 | Sensitive | lineage4.8 | None | SRR11349137 | RR-TB | lineage4.4.1.1.1 | None | SRR7070399 | Other | lineage2.2.1 | None | ERR4192419 | Other | lineage6.1.3 | None | SRR6855774 | Other | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173113 | Other | lineage4.3;lineage4.9 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR3675256 | Other | lineage4.7 | None | SRR7068939 | Other | lineage4.2.2.2 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR18002929 | HR-TB | lineage2.2.1 | None | SRR1019127 | Other | lineage4.9 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR9971256 | MDR-TB | lineage2.2.1 | None | SRR6044888 | Other | lineage4.1.1.3.1 | None | SRR5007165 | Other | lineage3 | None | SRR7069199 | Other | lineage4.8 | None | ERR2515641 | Other | lineage2.2.1 | za | ERR10219868 | Other | lineage4.1.2.1 | None | SRR10315630 | MDR-TB | lineage4.3.3 | None | SRR11349185 | Other | lineage4.4.1.1.1 | None | SRR11349148 | RR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR9027228 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069754 | Other | lineage4.3.2 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR10796625 | Other | lineage4.4.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046815 | Other | lineage3 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR10321138 | Other | La3 | None | SRR6045909 | Other | lineage4.8.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | SRR11342680 | Other | lineage4.8 | None | SRR22048392 | Other | lineage4.8 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR4819867 | Other | lineage1.1.3.2 | None | SRR18003011 | Other | lineage2.2.1 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117780 | Sensitive | lineage4.1.2.1 | None |
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