EBG00000313339 - n.2220C>T
Drug resistance types
47 Sensitive
19 RR-TB
10 HR-TB
18 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 2 |
| lineage4 | 6 |
| lineage4.9 | 35 |
| lineage2.2.1 | 14 |
| lineage4.3.3 | 6 |
| La1.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.2.2.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.2.2.1 | 3 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1.1 | 3 |
| lineage4.2.2.2 | 3 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| 1 | |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage1.1.2 | 1 |
| La1.8.1 | 4 |
| lineage4.1.2 | 2 |
| lineage3 | 6 |
| lineage4.8 | 31 |
| lineage1.2.2.2 | 2 |
| lineage4.5 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage5.1.1 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2.2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.7 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.1;lineage1.1.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 162 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3957925 | Sensitive | lineage4.3.2 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR5866312 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865032 | MDR-TB | lineage4.3.3 | None | ERR5866438 | MDR-TB | lineage2.2.1 | None | ERR6201802 | Other | La1.2 | None | ERR5987396 | MDR-TB | lineage4.3.2 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | SRR10272569 | Sensitive | lineage4.4.1.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173025 | Other | lineage4.9 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR13199734 | Other | La1.2 | None | SRR1181250 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1184379 | Other | lineage4 | None | SRR1184383 | Other | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SRR11972194 | HR-TB | lineage2.2.1.1 | None | SRR12006699 | Sensitive | lineage1.2.1.2.1 | None | SRR12199428 | Sensitive | lineage4.9;lineage1.1 | None | SRR1791910 | Other | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR15399219 | HR-TB | lineage4.3.4.2 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR16149168 | MDR-TB | lineage4.2.2.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR305201 | Sensitive | lineage4.9 | None | SRR21728339 | Other | lineage3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR192071 | Other | La1.8.1 | None | SRR3082067 | Sensitive | lineage4.8 | None | SRR3085281 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085326 | Sensitive | lineage4.8 | None | SRR3105736 | Other | lineage1.2.2.2 | None | SRR8003011 | MDR-TB | lineage4.8 | in | ERR2229541 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR2229810 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229204 | Other | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229691 | Sensitive | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228813 | Other | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR4034769 | Other | lineage4.1.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SAMEA3450033 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR1082126 | Sensitive | lineage5.1.1 | None | SRR5341375 | Other | lineage4.9 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045164 | Other | lineage4.1.2.1 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SRR6044774 | Other | lineage3 | None | SRR6046907 | Other | lineage4.9 | None | ERR2851371 | Other | lineage4.9 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6397770 | Other | lineage4.7 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR6896539 | MDR-TB | lineage3 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR8073606 | Other | La1.8.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7517752 | MDR-TB | lineage2.2 | None | SRR7517817 | MDR-TB | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR7755767 | Sensitive | lineage4.3.3 | None | DRR034348 | Other | lineage2.2.1 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR017781 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | ERR028356 | Sensitive | lineage4.1;lineage1.1.1.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR036215 | Other | lineage4.8 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3439277 | Sensitive | lineage4.9 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None |
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