EBG00000313339 - n.2220C>T


Drug resistance types
29 Sensitive 24 RR-TB 8 HR-TB 7 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 56 Other
lineage Counts
lineage Count
lineage2.2.1.1 3
lineage4.8 52
lineage4.4.1.1 2
lineage4.1.4 1
lineage4.4.1.2 2
La1.2.BCG;lineage4.9 1
lineage3 3
lineage4.8;lineage4.9 2
lineage4.3.4.1 1
lineage2.2.1;lineage4 1
lineage2.2.2 1
lineage4 1
lineage4.2.2.2 3
lineage4.9 15
lineage4.1.2.1 2
lineage2.2.2;lineage4 2
La1.8.1 5
lineage4.3.2.1 3
lineage1.2.2.1 3
lineage1.2.2.2 1
lineage1.1.2 1
lineage4.3.3 3
lineage2.2.1 5
lineage3.1.2;lineage4.1.1.3.1 1
La1.2 1
lineage4.1.2 1
lineage4.3.2 2
lineage4.2.2.1 1
lineage4.6.2.2 1
lineage4.6.1.1 1
lineage4.1.1.3 2
lineage4.6.1.2 1
spoligotype Counts
spoligotype Count
None 124
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1011489 Sensitive lineage2.2.1.1 None
ERR978756 Other lineage4.8 None
ERR10796625 Other lineage4.4.1.1 None
ERR3324351 HR-TB lineage4.1.4 None
SRR6397579 Other lineage4.4.1.2 ca
ERR560442 Sensitive La1.2.BCG;lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
ERR019855 Other lineage3 None
ERR2228810 Other lineage4.8;lineage4.9 None
ERR2229733 Other lineage4.8 dk
ERR3324331 MDR-TB lineage4.3.4.1 None
SRR6982448 Sensitive lineage2.2.1;lineage4 None
ERR2229811 Other lineage4.8 dk
ERR978757 RR-TB lineage4.8 None
SRR6152899 MDR-TB lineage2.2.2 ca
ERR4811708 HR-TB lineage4 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SAMN02380985 Sensitive lineage4.2.2.2 None
SRR1049031 Sensitive lineage4.9 None
SRR1173139 Sensitive lineage4.9 None
SAMEA3450033 Other lineage4.8 None
ERR978693 Other lineage4.8 None
ERR3324362 HR-TB lineage4.1.2.1 None
SRR6397815 Other lineage4.4.1.1 None
ERR2228890 Other lineage4.8;lineage4.9 None
SRR1013637 Sensitive lineage2.2.2;lineage4 None
SAMEA3501067 RR-TB lineage4.8 None
SRR8073606 Other La1.8.1 None
SRR1140927 Sensitive lineage4.3.2.1 None
SAMN02350450 Sensitive lineage1.2.2.1 None
ERR2229540 Sensitive lineage4.8 None
SRR5341295 Sensitive lineage1.2.2.2 in
ERR978734 RR-TB lineage4.8 None
ERR978750 RR-TB lineage4.8 None
ERR978754 RR-TB lineage4.8 None
SRR1173833 Other lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR1011492 Sensitive lineage1.2.2.1 None
SRR15522850 HR-TB lineage1.1.2 None
SRR1172816 MDR-TB lineage4.3.3 None
SRR305201 Sensitive lineage4.9 None
ERR2229436 Other lineage4.8 None
SRR1180252 Other lineage4.9 None
ERR192071 Other La1.8.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR1049030 Sensitive lineage4.9 None
ERR978748 Other lineage4.8 None
SRR6152980 HR-TB lineage4.8 ca
SRR023450 RR-TB lineage2.2.1 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
SAMN02585982 MDR-TB lineage4.3.3 None
SRR1183197 Other lineage4.9 None
SRR13199734 Other La1.2 None
ERR978751 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
ERR2229541 Other lineage4.8 None
SRR1062860 Sensitive lineage2.2.1.1 None
SAMN02350447 Sensitive lineage2.2.1.1 None
SRR1049568 Sensitive lineage4.2.2.2 None
ERR2228899 Other lineage4.8 None
ERR2228900 Other lineage4.8 None
SRR1013636 Sensitive lineage2.2.2;lineage4 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR270777 HR-TB lineage4.1.2 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978746 RR-TB lineage4.8 None
ERR3957925 Sensitive lineage4.3.2 None
SAMEA3501070 RR-TB lineage4.8 None
ERR036215 Other lineage4.8 None
SRR1175304 HR-TB lineage4.3.3 None
ERR978760 RR-TB lineage4.8 None
SRR1173766 Sensitive lineage4.9 None
SRR8600288 Other La1.8.1 None
SRR6397733 Other lineage4.4.1.2 None
ERR978755 RR-TB lineage4.8 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR911929_ERR911930 Other lineage4.8 None
ERR7737918 MDR-TB lineage4.2.2.1 None
ERR3324373 MDR-TB lineage2.2.1 None
SRR1019130 Sensitive lineage4.3.2.1 None
ERR978747 Other lineage4.8 None
ERR978726 RR-TB lineage4.8 None
SAMEA3501015 Other lineage4.8 None
ERR502472 Sensitive lineage4.6.2.2 None
ERR2228838 Other lineage4.8 None
SRR7236134 Other La1.8.1 None
ERR978735 Other lineage4.8 None
ERR978762 Other lineage4.8 None
SRR1180482 Other lineage4.9 None
SRR1062863 Sensitive lineage1.2.2.1 None
ERR978727 Other lineage4.8 None
ERR911930 Other lineage4.8 None
ERR987733 Other lineage4.6.1.1 None
SRR023487 RR-TB lineage2.2.1 None
ERR736816 Other lineage4.9 None
ERR2229366 Other lineage4.8 None
ERR2228910 Other lineage4.8 None
ERR2229204 Other lineage4.8 None
SRR1173421 Other lineage4.9 None
SRR1183193 Other lineage4.9 None
ERR2512423 Other lineage4.1.1.3 None
ERR978752 Other lineage4.8 None
SRR1049569 Sensitive lineage4.2.2.2 None
ERR911929 Other lineage4.8 None
SRR1183377 Sensitive lineage4.9 None
SRR1791940 Other La1.8.1 None
ERR5987396 MDR-TB lineage4.3.2 None
ERR2229147 Other lineage4.8 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR036194 Other lineage4.6.1.2 None
DRR034348 Other lineage2.2.1 None
SRR5341417 HR-TB lineage3 None
ERR978761 Other lineage4.8 None
SAMEA3501052 RR-TB lineage4.8 None
ERR017781 Other lineage3 None
SAMEA3501046 RR-TB lineage4.8 None
SAMN02350456 Sensitive lineage4.3.2.1 None
SRR18572455 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR978733 RR-TB lineage4.8 None
SRR7131122 Other lineage2.2.1 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR978694 Other lineage4.8 None