EBG00000313339 - n.2220C>T
Drug resistance types
29 Sensitive
24 RR-TB
8 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| La1.8.1 | 5 |
| lineage4.2.2.1 | 1 |
| lineage4.9 | 16 |
| lineage4.6.2.2 | 1 |
| lineage4.8 | 52 |
| lineage1.2.2.1 | 3 |
| lineage2.2.1.1 | 3 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.2 | 2 |
| lineage4 | 1 |
| lineage4.2.2.2 | 3 |
| lineage4.3.3 | 3 |
| lineage2.2.2;lineage4 | 2 |
| lineage4.3.2.1 | 3 |
| lineage3 | 3 |
| lineage2.2.1;lineage4 | 1 |
| La1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.4.1.2 | 2 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 125 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1791940 | Other | La1.8.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | SRR1180482 | Other | lineage4.9 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR1049030 | Sensitive | lineage4.9 | None | ERR2229436 | Other | lineage4.8 | None | SRR1180252 | Other | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR5987396 | MDR-TB | lineage4.3.2 | None | ERR192071 | Other | La1.8.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR978693 | Other | lineage4.8 | None | SRR1173139 | Sensitive | lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1183197 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | ERR2229541 | Other | lineage4.8 | None | ERR736816 | Other | lineage4.9 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | SRR1183193 | Other | lineage4.9 | None | ERR2228899 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | SRR8073606 | Other | La1.8.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | SRR5341417 | HR-TB | lineage3 | None | ERR911929 | Other | lineage4.8 | None | SRR1183377 | Sensitive | lineage4.9 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | SRR1173833 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR13199734 | Other | La1.2 | None | SRR8600288 | Other | La1.8.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR987733 | Other | lineage4.6.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR1049031 | Sensitive | lineage4.9 | None | ERR10796625 | Other | lineage4.4.1.1 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | ERR978755 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR019855 | Other | lineage3 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | SRR305201 | Sensitive | lineage4.9 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR978752 | Other | lineage4.8 | None | SRR1173421 | Other | lineage4.9 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR2228838 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2229540 | Sensitive | lineage4.8 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | ERR2229204 | Other | lineage4.8 | None | ERR911930 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SRR7236134 | Other | La1.8.1 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR036215 | Other | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR3957925 | Sensitive | lineage4.3.2 | None | ERR978735 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | DRR034348 | Other | lineage2.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | ERR2229811 | Other | lineage4.8 | dk | ERR978754 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR017781 | Other | lineage3 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR15522850 | HR-TB | lineage1.1.2 | None |
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