EBG00000313339 - n.717T>G
Drug resistance types
30 Sensitive
2 RR-TB
20 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 3 |
| lineage4.9 | 49 |
| lineage2.2 | 4 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2.1 | 5 |
| lineage4.8 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.4.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage1.1.2 | 1 |
| La1.7;lineage4.9 | 4 |
| La3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.2 | 1 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.4.2 | 1 |
| lineage6.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| M.canetti;lineage1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.2.BCG | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR6359082 | Other | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3797029 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4769421 | Other | La1.2 | None | ERR387051 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR6358979 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR161037 | Other | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR926163 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1915485 | Other | La1.2.BCG | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR1915487 | Other | La1.2.BCG | None |
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