lineage | Count |
---|---|
lineage4.9.1 | 1 |
lineage4.9 | 19 |
lineage4.3.4.1 | 1 |
lineage4 | 56 |
lineage4.4.1.2 | 1 |
31 | |
lineage4.3.4.1;La1.7 | 1 |
lineage4.1.2.1 | 3 |
lineage5.1.2 | 1 |
La1.2 | 1 |
lineage2.2.1 | 4 |
lineage2.2 | 3 |
lineage7;lineage2.2.1.2 | 1 |
lineage1.1.2 | 2 |
lineage4.1.1 | 1 |
lineage4.1 | 1 |
lineage4.3.2.1 | 1 |
lineage3 | 1 |
La1.8.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 131 |
ID | Drug resistance | Lineage | Country iso2 | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR9940976 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3283014 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4769474 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473332 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798431 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR4811493 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675265 | Other | lineage4 | None | SRR3675488 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675510 | Other | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR212123 | Other | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5341456 | Other | None | SRR5431730 | Other | La1.8.1 | None | SRR6045503 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046299 | HR-TB | None | ERR4830353 | Other | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046492 | Other | None | SRR6046802 | Other | lineage4 | None |
---|