EBG00000313325 - n.293C>T
Drug resistance types
47 Sensitive
5 RR-TB
10 HR-TB
8 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9 | 23 |
| lineage2.2.2 | 4 |
| lineage2.2.1 | 15 |
| lineage3 | 5 |
| lineage4.1.2 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.3.3 | 5 |
| lineage1.1.2 | 1 |
| La1.2.BCG | 5 |
| lineage4.8 | 3 |
| lineage1.1.3.3 | 1 |
| lineage4.1.3 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage6.2.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1.1 | 2 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.3.2 | 1 |
| lineage3.1.1 | 2 |
| lineage1.1.3.2 | 1 |
| lineage1.2.2.1;lineage4 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7755705 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR3283015 | Sensitive | lineage4.9 | None | SRR1167264 | Pre-XDR-TB | lineage2.2.2 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR164004 | Sensitive | lineage4.9 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | ERR3275548 | Sensitive | lineage3 | nl | SRR11342682 | Other | lineage4.1.2 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR7755733 | MDR-TB | lineage4.3.3 | None | SRR8375619 | Sensitive | lineage1.1.2 | None | SRR1915484 | Other | La1.2.BCG | None | SRR6280271 | Sensitive | lineage2.2.1 | cn | SRR16157045 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR212015 | Sensitive | lineage4.8 | None | SRR1915487 | Other | La1.2.BCG | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR1165236 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR12199409 | Other | lineage1.2.2.2 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | SRR3742667 | Sensitive | lineage4.9 | None | SRR14782555 | Other | lineage2.2.1 | None | ERR2446544 | Sensitive | lineage3 | nl | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | SRR1238559 | Other | lineage4.9 | None | SRR16156291 | Sensitive | lineage4.9 | None | SRR17567930 | Sensitive | lineage4.4.1.1 | None | SRR15368784 | Sensitive | lineage2.2.1.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | SRR6280286 | Sensitive | lineage2.2.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR7131160 | Sensitive | lineage3 | None | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR987766 | HR-TB | lineage4.3.3 | None | ERR970453 | RR-TB | lineage4.1.2 | None | SRR1173377 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR5152904 | Other | lineage2.2.1 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR6046609 | Sensitive | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | ERR736825 | Sensitive | lineage4.9 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | SRR15368751 | Sensitive | lineage2.2.1 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | SRR1174277 | HR-TB | lineage2.2.1 | None | SRR1173719 | Other | lineage4.9 | None | ERR10796586 | Other | lineage4.9 | None | SRR1915486 | HR-TB | La1.2.BCG | None | SRR6046834 | Sensitive | lineage4.9 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR036200 | Sensitive | lineage4.1.2 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | SRR1915483 | HR-TB | La1.2.BCG | None | ERR3283049 | Sensitive | lineage4.9 | None | SRR19573671 | Other | lineage1.2.2.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR19303931 | Other | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | ERR212112 | Sensitive | lineage1.2.2.1;lineage4 | None | ERR10796619 | Sensitive | lineage4.3.3 | None | ERR10796625 | Other | lineage4.4.1.1 | None | ERR10796635 | Other | lineage4.8 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | ERR181906 | Sensitive | lineage3.1.1 | mw | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR1023494 | Sensitive | lineage3 | None | SRR15368707 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None |
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