EBG00000313339 - n.2798C>G


Drug resistance types
59 Sensitive 2 RR-TB 60 HR-TB 18 MDR-TB 30 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
lineage2.2.1 38
lineage4.9 28
lineage2.2.2;lineage4 7
lineage4 3
lineage2.2.2 27
lineage4.1.2.1 12
lineage3 10
lineage4.8 7
lineage1.2.2.2 1
lineage4.4.2 5
lineage2;lineage4.9 2
lineage4.3.4.1 3
lineage2.2;lineage4.9 2
lineage2.2.1;lineage2.2.2 6
lineage1.2.1.2.1 3
lineage2 1
lineage4.6.2.2 5
lineage4.3.3 1
lineage2.2.1;lineage4 3
lineage3.1.1 1
lineage2.2;lineage4 2
lineage4.1.1.3 1
lineage4.1.1.1 1
lineage2.2.1.1;lineage4 1
lineage4.5 5
lineage4.2.1 1
lineage4.8.1 3
lineage2.2.1.1 5
lineage4.4.1.1 2
lineage2.2.2;lineage4.9 2
lineage4.2.2.2 2
lineage6.3.1 1
lineage1.1.1.1 1
lineage4.6 1
lineage4.4.1.2 1
lineage4.6.5 1
La1.8.1 1
lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 197
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19304064 MDR-TB lineage2.2.1 None
SRR1202613 Other lineage4.9 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048975 HR-TB lineage2.2.1 None
SRR16100231 Other lineage4 None
SRR1013610 Sensitive lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR19303792 Sensitive lineage4.1.2.1 None
ERR1023494 Sensitive lineage3 None
SRR15316299 Sensitive lineage2.2.1 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR19303779 Sensitive lineage4.8 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
ERR4815517 Other lineage1.2.2.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1013553 MDR-TB lineage2.2.2 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR1048966 MDR-TB lineage2.2.1 None
SRR19303933 Other lineage4.8 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1013602 HR-TB lineage2.2.1 None
SRR15368751 Sensitive lineage2.2.1 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR773806 Sensitive lineage2.2.1 None
ERR3275866 Other lineage4.1.2.1 nl
SRR1048980 HR-TB lineage3 None
SRR6046834 Sensitive lineage4.9 None
ERR10796599 Other lineage4.8 None
ERR4821372 Other lineage4.1.2.1 None
SRR1144809 HR-TB lineage2.2.1 None
SRR14802013 Sensitive lineage4.3.4.1 None
ERR3797084 Sensitive lineage4.9 None
SRR1013614 Sensitive lineage2.2.1 None
SRR1048852 HR-TB lineage2.2;lineage4.9 None
ERR323035 Sensitive lineage4.9 None
ERR4815178 Other lineage4.8 gb
ERR3275548 Sensitive lineage3 nl
SRR7131160 Sensitive lineage3 None
SRR1013609 Sensitive lineage4 None
SRR1048987 HR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
ERR3283049 Sensitive lineage4.9 None
ERR400443 Sensitive lineage1.2.1.2.1 None
SRR1049040 HR-TB lineage2 None
SRR1048988 HR-TB lineage2.2.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
ERR4814911 Other lineage4.3.3 None
SRR1013584 HR-TB lineage2.2.2 None
SRR1013608 Sensitive lineage2.2.2 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
SRR7070274 Sensitive lineage1.2.1.2.1 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR1048886 HR-TB lineage2.2.2;lineage4 None
ERR2517457 Sensitive lineage3 None
ERR4799636 Pre-XDR-TB lineage2.2.1 None
SRR1202628 Sensitive lineage4.9 None
SRR1202583 Sensitive lineage4.9 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013590 HR-TB lineage2.2.1 None
SRR10869267 MDR-TB lineage2.2.2 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR1049005 MDR-TB lineage2.2.2 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1048992 HR-TB lineage2.2;lineage4 None
SRR1048853 HR-TB lineage2;lineage4.9 None
ERR4820075 Other lineage4.1.2.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR4814932 Other lineage4.1.1.1 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1048968 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SAMN02360585 HR-TB lineage4.5 None
SRR1208882 Sensitive lineage4.9 None
ERR4187652 Other lineage4.9 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR19303773 Other lineage4.6.2.2 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR4819641 Other lineage4.6.2.2 None
SRR1048965 HR-TB lineage2.2.1 None
ERR2446544 Sensitive lineage3 nl
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR6046609 Sensitive lineage4.9 None
SRR1013596 Sensitive lineage3 None
SRR1013612 Sensitive lineage4.5 None
SRR1048994 HR-TB lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
ERR867575 Other lineage4.9 None
SRR6152910 Sensitive lineage1.2.1.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR19303775 Sensitive lineage3 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1013583 Sensitive lineage2.2.2 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR1048983 HR-TB lineage2.2.1.1 None
SRR11342686 MDR-TB lineage4.8 None
SAMN02360586 HR-TB lineage2.2.1 None
SRR1013633 MDR-TB lineage2.2.2 None
SRR1048885 HR-TB lineage2.2;lineage4 None
ERR867554 Other lineage4.3.4.1 None
SRR19303788 Sensitive lineage4.8 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
ERR4819096 Other lineage4.4.1.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1208567 Sensitive lineage4.9 None
SRR1049022 HR-TB lineage2.2.2;lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR4818440 Other lineage6.3.1 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
ERR4817194 Sensitive lineage4.1.2.1 None
ERR4819622 Other lineage4.1.2.1 None
SAMN02360577 HR-TB lineage3 None
SRR1013581 Pre-XDR-TB lineage2.2.1 None
ERR3283051 Other lineage4.9 None
SRR11349134 Pre-XDR-TB lineage4.8.1 None
SRR1013600 Sensitive lineage2.2.1.1 None
SRR1048997 HR-TB lineage2.2.1 None
ERR1193714 Sensitive lineage4.3.4.1 None
DRR099689 Sensitive lineage1.1.1.1 None
ERR7737820 MDR-TB lineage4.2.2.2 None
SRR1048981 HR-TB lineage3 None
ERR4818128 Other lineage4.1.2.1 None
ERR4819430 Sensitive lineage4.1.2.1 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
ERR4819423 Other lineage4.6.2.2 None
SRR17567930 Sensitive lineage4.4.1.1 None
ERR3283008 Other lineage4.9 None
SRR1202503 Sensitive lineage4.9 None
SRR1049023 HR-TB lineage4.9 None
SRR19303774 Sensitive lineage4.1.2.1 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR1013607 HR-TB lineage2.2.2 None
SRR1208908 Sensitive lineage4.9 None
ERR4872193 MDR-TB lineage4.6 None
SRR1208298 Sensitive lineage4.9 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013611 Sensitive lineage4.5 None
SRR1013634 MDR-TB lineage2.2.2 None
ERR4820736 Sensitive lineage4.1.2.1 gb
SRR1013604 HR-TB lineage2.2.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1173416 Sensitive lineage4.9 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013613 Sensitive lineage2.2.1 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
SRR15508558 Sensitive lineage4.1.2.1 None
SRR15368784 Sensitive lineage2.2.1.1 None
ERR3283015 Sensitive lineage4.9 None
ERR3276155 Other lineage4.1.2.1 nl
SRR17567887 Sensitive lineage4.4.1.2 None
SRR15368707 HR-TB lineage2.2.1;lineage2.2.2 None
ERR4818444 Other lineage4.6.5 None
ERR751317 Sensitive lineage4.9 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR7069638 Pre-XDR-TB lineage2.2.1 None
SRR1049004 HR-TB lineage2.2.2 None
SRR1048996 Sensitive lineage4.5 None
SRR1048995 HR-TB lineage4.5 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1202733 Sensitive lineage4.9 None
ERR4815870 HR-TB lineage4.6.2.2 gb
SAMN02360590 MDR-TB lineage2.2.2 None
ERR3276277 MDR-TB lineage2.2.1 nl
SRR1173720 Sensitive lineage4.9 None
DRR213597 MDR-TB lineage2.2.2 None
SRR5382721 Other La1.8.1 None
ERR4815193 MDR-TB lineage4.8 None
SRR1048982 HR-TB lineage2.2.1.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR1048993 HR-TB lineage4.9 None
ERR400350 Sensitive lineage4.9 None
ERR3439294 Sensitive lineage4.9 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
SRR1202680 Other lineage4.9 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
SRR11342675 Pre-XDR-TB lineage4.8.1 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR4817294 Other lineage4.1.2 None
SRR1048986 HR-TB lineage2.2.1 None