Rv3794 - c.2856A>G


Drug resistance types
222 Sensitive 17 RR-TB 121 HR-TB 202 MDR-TB 100 Pre-XDR-TB 1 XDR-TB 91 Other
lineage Counts
lineage Count
lineage2.1 609
M.canetti;lineage2.1;lineage4.9 12
5
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9 16
lineage2.1;lineage4.9;lineage6.3 9
lineage2.1;lineage2.2.1 4
lineage4.9;lineage6.3 6
La3;M.canetti;lineage2.1;lineage4.9 10
lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9 7
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
La3;lineage2.2.1 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.1.1 1
lineage2.1;lineage2.2.1.1 2
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
lineage2.2.1;lineage3 1
lineage4.6.2.2 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4 1
lineage4.1.2.1 2
La3;lineage2.1;lineage6.3 1
La3;lineage2 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage1.1.2 2
lineage2.1;lineage4.3.2 1
La3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage3 2
lineage4 3
M.canetti;lineage2.1;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1.3 2
M.canetti;lineage4.9 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.8 1
La1.7;M.canetti;lineage4.9 1
lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 754
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR22251586 Other lineage2.1 None
ERR4831956 MDR-TB lineage2.1 None
SRR5709883 Pre-XDR-TB lineage2.1 th
SRR10828193 Pre-XDR-TB lineage2.1 None
SRR11715718 Sensitive lineage2.1 None
SRR11715724 Pre-XDR-TB lineage2.1 None
SRR8237298 Sensitive lineage2.1 ch
DRR130093 MDR-TB lineage2.1 None
ERR4821572 Sensitive lineage2.1 None
SRR15316176 Other lineage2.1 None
SRR1710066 Sensitive lineage2.1 cn
SRR30340068 Pre-XDR-TB lineage2.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831602 MDR-TB lineage2.1 vn
SRR26399765 Sensitive lineage2.1 None
SRR5114018 Pre-XDR-TB lineage2.1 None
SRR11662620 MDR-TB lineage2.1 None
SRR5709899 Pre-XDR-TB lineage2.1 th
SRR5073995 Sensitive lineage2.1 vn
ERR9119231 HR-TB lineage2.1 None
SRR11715722 Pre-XDR-TB lineage2.1 None
ERR13290674 MDR-TB lineage2.1 None
SRR21576630 MDR-TB lineage2.1 None
SRR5817473 MDR-TB lineage2.1 au
SRR15368923 Sensitive lineage2.1 None
ERR7911475 RR-TB lineage2.1 vn
ERR7911509 MDR-TB lineage2.1 vn
SRR10185945 MDR-TB lineage2.1 None
SRR21732985 Sensitive lineage2.1 None
SRR5067475 Sensitive lineage2.1 vn
SRR5710021 Pre-XDR-TB lineage2.1 th
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR4817862 HR-TB lineage2.1 gb
ERR4830363 HR-TB lineage2.1 vn
ERR4830397 HR-TB lineage2.1 vn
SRR26399299 HR-TB lineage2.1 None
SRR8651652 MDR-TB lineage2.1 cn
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR13439886 HR-TB lineage2.1 None
SRR28741098 MDR-TB lineage2.1 None
SRR28741103 MDR-TB lineage2.1 None
SRR28741115 MDR-TB lineage2.1 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29440797 Sensitive lineage2.1 None
ERR4831637 MDR-TB lineage2.1 vn
DRR188928 Sensitive lineage2.1 None
SRR10341351 MDR-TB lineage2.1;lineage2.2.1 None
SRR10341352 Pre-XDR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR13291887 Sensitive lineage2.1 None
SRR28741108 MDR-TB lineage2.1 None
SRR30180406 MDR-TB lineage2.1 None
SRR10828639 Pre-XDR-TB lineage2.1 None
SRR11662326 Pre-XDR-TB lineage2.1 None
SRR11662417 Pre-XDR-TB lineage2.1 None
SRR11662502 MDR-TB lineage2.1 None
SRR11662666 MDR-TB lineage2.1 None
SRR1710064 Sensitive lineage2.1 cn
SRR6480524 Sensitive lineage2.1 None
SRR28868845 Sensitive lineage2.1 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1710068 Sensitive lineage2.1 cn
ERR9786604 Other None
SRR1710063 Sensitive lineage2.1 cn
SRR1710071 RR-TB lineage2.1 cn
SRR1144764 Sensitive lineage2.1 None
DRR473770 Sensitive lineage2.1 None
SRR24799276 Sensitive lineage2.1 None
SRR5073710 Sensitive lineage2.1 vn
SRR5073822 HR-TB lineage2.1 vn
SRR5073883 Sensitive lineage2.1 vn
SRR6045380 Other lineage2.1;lineage4.9 None
ERR8773616 MDR-TB lineage2.1 None
ERR13290673 Sensitive lineage2.1 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR4831618 MDR-TB lineage2.1 None
SRR28741111 MDR-TB lineage2.1 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR21576627 MDR-TB lineage2.1 None
SRR29050928 Other lineage4.9 None
SRR5709814 MDR-TB lineage2.1 th
ERR551044 HR-TB lineage2.1 None
SRR28868379 Sensitive lineage2.1 None
SRR28741118 MDR-TB lineage2.1 None
SRR22249862 Sensitive lineage2.1 None
ERR13291064 HR-TB lineage2.1 None
ERR13291073 MDR-TB lineage2.1 None
DRR130078 Pre-XDR-TB lineage2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR21576700 MDR-TB lineage2.1 None
ERR7737924 MDR-TB lineage2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR26399751 HR-TB lineage2.1 None
SRR20969753 Sensitive lineage2.1;lineage2.2.1 None
SRR21576681 MDR-TB lineage2.1 None
ERR13291036 MDR-TB lineage2.1 None
SRR5067642 Sensitive lineage2.1 vn
SRR5114017 Pre-XDR-TB lineage2.1 None
DRR189026 Sensitive lineage2.1 None
SRR11715723 MDR-TB lineage2.1 None
DRR474007 Sensitive lineage2.1 None
SRR11662325 MDR-TB lineage2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR13290709 MDR-TB lineage2.1 None
SRR16100240 Sensitive lineage2.1 None
ERR11068593 Sensitive lineage2.1 None
ERR2843484 Other lineage2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR5067405 Other lineage2.1 vn
ERR2843485 HR-TB lineage2.1 None
SRR28741097 Pre-XDR-TB lineage2.1 None
SRR21576560 MDR-TB lineage2.1 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR5114022 Pre-XDR-TB lineage2.1 None
ERR9787139 Other lineage6.3.1 None
SRR21576574 MDR-TB lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR752262 Other lineage2.1 th
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR10808989 Sensitive lineage2.1 None
ERR4830396 MDR-TB lineage2.1 vn
SRR11662628 MDR-TB lineage2.1 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR10828200 Pre-XDR-TB lineage2.1 None
SRR921502 Pre-XDR-TB lineage2.1;lineage2.2.1 None
SRR11715719 MDR-TB lineage2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9119439 HR-TB lineage2.1 None
SRR5067458 Pre-XDR-TB lineage2.1 vn
SRR22249713 HR-TB lineage2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR26112263 Sensitive lineage2.1 None
SRR5065604 Sensitive lineage2.1 vn
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR10185944 MDR-TB lineage2.1 None
SRR5065382 Sensitive lineage2.1 vn
SRR5065551 Other lineage2.1 vn
DRR474050 Sensitive lineage2.1 None
SRR7496472 Other lineage4.9 None
ERR4832002 Pre-XDR-TB lineage2.1 None
SRR26936969 MDR-TB lineage2.1 None
SRR11828983 Pre-XDR-TB lineage2.1 th
ERR775791 Sensitive lineage2.1 th
SRR11662572 MDR-TB lineage2.1 None
SRR22250260 Sensitive lineage2.1 None
SRR26399652 Sensitive lineage2.1 None
SRR25207056 Pre-XDR-TB lineage2.1 None
ERR4831997 MDR-TB lineage2.1 None
ERR2446339 Sensitive lineage2.1 nl
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
DRR189007 Sensitive lineage2.1 None
SRR10341347 Pre-XDR-TB lineage2.1 None
ERR4811877 HR-TB lineage2.1 pe
SRR11828971 MDR-TB lineage2.1 None
SRR11828981 Sensitive lineage2.1 th
SRR24083740 Sensitive lineage2.1 None
DRR184642 Sensitive lineage2.1 vn
SRR3724672 Sensitive lineage2.1 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR21747059 MDR-TB lineage2.1 None
ERR234216 Sensitive lineage2.1 None
ERR8773681 HR-TB lineage2.1 None
SRR11828992 Pre-XDR-TB lineage2.1 th
SRR28409607 Sensitive lineage2.1 None
SRR3724666 HR-TB lineage2.1 None
SRR27450002 Sensitive lineage2.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR13290914 HR-TB lineage2.1 None
SRR25827682 Other None
SRR1172857 Other None
SRR26399167 HR-TB lineage2.1 None
ERR4828566 HR-TB lineage2.1 vn
ERR13439885 HR-TB lineage2.1 None
ERR13290728 MDR-TB lineage2.1 None
ERR13266537 Other lineage2.1 None
SRR28741106 MDR-TB lineage2.1 None
SRR28741109 MDR-TB lineage2.1 None
SRR28741117 MDR-TB lineage2.1 None
SRR30180482 RR-TB lineage2.1 None
SRR30180480 MDR-TB lineage2.1 None
SRR30180222 MDR-TB lineage2.1 None
SRR30180343 MDR-TB lineage2.1 None
SRR30180344 MDR-TB lineage2.1 None
SRR30180323 MDR-TB lineage2.1 None
SRR30180473 MDR-TB lineage2.1 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR234252 Sensitive lineage2.1 us
SRR12142341 HR-TB lineage2.1 None
SRR5065294 Sensitive lineage2.1 vn
SRR5067408 HR-TB lineage2.1 vn
SRR5073656 Sensitive lineage2.1 vn
SRR26112230 Sensitive lineage2.1 None
SRR26399879 Other lineage2.1 None
ERR13285337 MDR-TB lineage2.1 None
SRR10394883 Pre-XDR-TB lineage2.1 None
SRR11715721 MDR-TB lineage2.1 None
SRR11828987 Pre-XDR-TB lineage2.1 None
SRR5067510 Sensitive lineage2.1 vn
SRR11828961 MDR-TB lineage2.1 None
SRR11828988 Pre-XDR-TB lineage2.1 None
SRR11828991 Pre-XDR-TB lineage2.1 None
SRR15723006 Pre-XDR-TB lineage2.1 None
SRR20969910 Sensitive lineage2.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR5074054 HR-TB lineage2.1 vn
SRR14519956 Other lineage2.1 None
ERR553373 Sensitive lineage2.1 de
SRR5341333 Other lineage2.1;lineage4.9 None
SRR5709887 Pre-XDR-TB lineage2.1 th
ERR4828640 HR-TB lineage2.1 vn
SRR29017514 Other lineage2.1 None
SRR29017279 Sensitive lineage2.1 None
ERR752234 MDR-TB lineage2.1 th
SRR21732243 Sensitive lineage2.1 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR30182621 Sensitive lineage2.1 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR22251890 Sensitive lineage2.1 None
SRR5065301 Sensitive lineage2.1 vn
SRR27450268 Sensitive lineage2.1 None
ERR4831874 Pre-XDR-TB lineage2.1 vn
ERR4831996 MDR-TB lineage2.1 vn
ERR13245795 Sensitive lineage2.1 None
SRR29017507 Other lineage2.1 None
SRR28859824 HR-TB lineage2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR13291075 MDR-TB lineage2.1 None
ERR13290943 MDR-TB lineage2.1 None
SRR10341353 Pre-XDR-TB lineage2.1 None
ERR13290711 RR-TB lineage2.1 None
ERR13291010 MDR-TB lineage2.1 None
SRR28741101 MDR-TB lineage2.1 None
SRR29440868 Sensitive lineage2.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5067713 Sensitive lineage2.1 vn
SRR10040398 MDR-TB lineage2.1 None
ERR2843486 HR-TB lineage2.1 None
ERR8773684 MDR-TB lineage2.1 None
SRR1710062 Other lineage2.1 cn
SRR28339297 Pre-XDR-TB lineage2.1 None
SRR26937132 RR-TB lineage2.1 None
SRR11662627 MDR-TB lineage2.1 None
SRR1710061 Sensitive lineage2.1 cn
SRR21747020 MDR-TB lineage2.1 None
SRR6339664 MDR-TB lineage2.1 None
SRR14520114 Sensitive lineage2.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR5065283 Other lineage2.1 vn
SRR10394882 Pre-XDR-TB lineage2.1 None
SRR6152905 HR-TB lineage2.1 ca
SRR10040213 MDR-TB lineage2.1 None
SRR5067285 Sensitive lineage2.1 vn
ERR4814575 Sensitive lineage2.1 None
SRR5067461 HR-TB lineage2.1 vn
SRR11662296 MDR-TB lineage2.1 None
SRR11662308 MDR-TB lineage2.1 None
ERR841493 Sensitive lineage2.1 None
ERR4822352 Pre-XDR-TB lineage2.1 None
ERR11081113 Sensitive lineage2.1 None
SRR11828960 MDR-TB lineage2.1 None
SRR28741105 MDR-TB lineage2.1 None
SRR5065560 MDR-TB lineage2.1 vn
SRR21277570 HR-TB lineage2.1 None
ERR4811554 MDR-TB lineage2.1;lineage2.2.1.1 cn
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR11662289 MDR-TB lineage2.1 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR21576605 RR-TB lineage2.1 None
SRR10809132 Sensitive lineage2.1 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR10828644 MDR-TB lineage2.1 None
SRR10828181 MDR-TB lineage2.1;lineage2.2.1 None
ERR4832040 HR-TB lineage2.1 None
SRR21747071 MDR-TB lineage2.1 None
SRR21709618 Sensitive lineage2.1 None
SRR11828986 MDR-TB lineage2.1 th
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR21576689 MDR-TB lineage2.1 None
SRR17729383 Sensitive lineage2.1 None
ERR4830412 HR-TB lineage2.1 vn
DRR261132 HR-TB lineage2.1 None
ERR13258518 MDR-TB lineage2.1 None
SRR5074182 Sensitive lineage2.1 vn
SRR11662498 Pre-XDR-TB lineage2.1 None
DRR188492 Sensitive lineage2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1710060 Sensitive lineage2.1 cn
SRR8237361 Sensitive lineage2.1 None
ERR13290912 MDR-TB lineage2.1 None
ERR4828548 Sensitive lineage2.1 vn
SRR10809080 RR-TB lineage2.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR13290732 MDR-TB lineage2.1 None
SRR29051076 Sensitive lineage2.1 None
SRR5709824 MDR-TB lineage2.1 th
SRR5709872 Pre-XDR-TB lineage2.1 th
SRR11828964 MDR-TB lineage2.1 None
SRR10040230 MDR-TB lineage2.1 None
SRR5073548 Other lineage2.1 vn
ERR2514124 Sensitive lineage2.1 None
SRR21690002 Sensitive lineage2.1 None
SRR5073902 Other lineage2.1 vn
SRR11662474 MDR-TB lineage2.1 None
SRR20969467 Pre-XDR-TB lineage2.1 None
SRR25206882 MDR-TB lineage2.1;lineage2.2.1.1 None
SRR12072600 Pre-XDR-TB lineage2.1 None
SRR10808945 Sensitive lineage2.1 None
SRR20969953 HR-TB lineage2.1 None
ERR8773618 MDR-TB lineage2.1 None
SRR11662288 MDR-TB lineage2.1 None
ERR13290981 MDR-TB lineage2.1 None
SRR5065418 Sensitive lineage2.1 vn
SRR5065619 Other lineage2.1 vn
SRR26400065 MDR-TB lineage2.1 None
ERR13290702 MDR-TB lineage2.1 None
SRR11828970 MDR-TB lineage2.1 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR11043783 Sensitive lineage2.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR775787 Sensitive lineage2.1 th
ERR270697 HR-TB lineage2.1 None
ERR4828547 Sensitive lineage2.1 vn
SRR10040389 MDR-TB lineage2.1 None
SRR11715715 MDR-TB lineage2.1 None
SRR10808635 Sensitive lineage2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR26937143 MDR-TB lineage2.1 None
SRR22251329 Other lineage2.1 None
ERR11049136 MDR-TB lineage2.1 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11662528 MDR-TB lineage2.1 None
DRR261166 HR-TB lineage2.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
DRR130141 Pre-XDR-TB lineage2.1 None
SRR5065292 HR-TB lineage2.1 vn
SRR5074174 Other lineage2.1 vn
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3205958 Pre-XDR-TB lineage2.1 None
SRR22249747 MDR-TB lineage2.1 None
SRR29051417 HR-TB lineage2.1 None
SRR26399649 Sensitive lineage2.1 None
SRR26399630 Sensitive lineage2.1 None
SRR26399854 MDR-TB lineage2.1 None
SRR11828978 Pre-XDR-TB lineage2.1 th
ERR11774878 Sensitive lineage2.1 None
SRR11828982 Pre-XDR-TB lineage2.1 th
SRR11828985 Pre-XDR-TB lineage2.1 th
SRR29093105 Other lineage2.2.2;lineage4 None
SRR5073499 Sensitive lineage2.1 vn
SRR5709798 Pre-XDR-TB lineage2.1 th
ERR13258511 Pre-XDR-TB lineage2.1 None
SRR29053595 Sensitive lineage2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR13290957 MDR-TB lineage2.1 None
ERR13291159 MDR-TB lineage2.1 None
ERR13290675 Pre-XDR-TB lineage2.1 None
SRR29440744 HR-TB lineage2.1 None
SRR28741100 MDR-TB lineage2.1 None
SRR28741112 MDR-TB lineage2.1 None
SRR28741113 MDR-TB lineage2.1 None
SRR28741116 MDR-TB lineage2.1 None
DRR473960 Sensitive lineage2.1 None
SRR28741107 MDR-TB lineage2.1 None
SRR28741102 MDR-TB lineage2.1 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119326 HR-TB lineage2.1 None
SRR12072597 Pre-XDR-TB lineage2.1 None
SRR22251409 Sensitive lineage2.1 None
SRR22251459 Sensitive lineage2.1;lineage2.2.1;lineage4 None
SRR12072599 Pre-XDR-TB lineage2.1 None
SRR29231479 RR-TB lineage4.9 None
SRR29050832 Sensitive lineage2.1 None
SRR11828980 MDR-TB lineage2.1 None
SRR21732682 HR-TB lineage2.1 None
SRR22249793 Sensitive lineage2.1 None
ERR4831974 MDR-TB lineage2.1 vn
SRR5114021 Pre-XDR-TB lineage2.1 None
SRR10828203 Pre-XDR-TB lineage2.1 None
ERR13291104 MDR-TB lineage2.1 None
ERR13290764 Pre-XDR-TB lineage2.1 None
ERR13439912 HR-TB lineage2.1 None
SRR15368709 HR-TB lineage2.1 None
SRR6325456 Other lineage2.1 us
SRR24083615 Sensitive lineage2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR5067580 Sensitive lineage2.1 vn
SRR21690988 Sensitive lineage2.1 None
SRR29096541 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR10040460 Pre-XDR-TB lineage2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR26399205 Sensitive lineage2.1 None
ERR7339141 Sensitive lineage2.1 None
ERR7361943 Sensitive lineage2.1 None
SRR14519852 Sensitive lineage2.1 None
SRR21747054 Pre-XDR-TB lineage2.1 None
ERR2704676 Sensitive lineage2.1 us
SRR21747063 MDR-TB lineage2.1 None
SRR5065441 Sensitive lineage2.1 vn
SRR26399168 Sensitive lineage2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818929 HR-TB lineage4.9 None
SRR30180332 Pre-XDR-TB lineage2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5067683 HR-TB lineage2.1 vn
SRR21685332 Sensitive lineage2.1 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5709764 Pre-XDR-TB lineage2.1 th
ERR13291051 Pre-XDR-TB lineage2.1 None
SRR30182595 Sensitive lineage2.1 None
ERR13291427 Sensitive lineage2.1 None
ERR3273209 MDR-TB lineage2.1 None
ERR031475 Sensitive lineage2.1 None
ERR13290893 MDR-TB lineage2.1 None
SRR29440579 Sensitive lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR7737929 MDR-TB lineage2.1 None
ERR234248 Sensitive lineage2.1 us
SRR11828977 Pre-XDR-TB lineage2.1 th
SRR20969677 HR-TB La3;lineage2 None
SRR1019178 Sensitive lineage2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11828989 Pre-XDR-TB lineage2.1 th
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR26399973 Other La3;lineage4.9 None
SRR5073838 Sensitive lineage2.1 vn
ERR9786682 Other lineage4.1.2.1 None
SRR5837708 Pre-XDR-TB lineage2.1 th
SRR11662293 MDR-TB lineage2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR5065616 Other lineage2.1 vn
SRR3416776 Other lineage2.1 None
SRR5073637 HR-TB lineage2.1 vn
SRR10341349 Pre-XDR-TB lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4821053 RR-TB lineage3 None
ERR4828643 Sensitive lineage2.1 vn
ERR181316 Sensitive lineage2.1 dj
SRR16100725 Sensitive lineage2.1 None
ERR13290679 Sensitive lineage2.1 None
SRR28858573 Sensitive lineage2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR22249972 Sensitive lineage2.1 None
ERR768032 RR-TB lineage2.1 th
SRR29051176 Other lineage2.1 None
DRR474009 Sensitive lineage2.1 None
SRR5709934 Pre-XDR-TB lineage2.1 th
DRR474158 Sensitive lineage2.1 None
ERR13290687 MDR-TB lineage2.1 None
ERR13290849 MDR-TB lineage2.1 None
SRR10828191 Pre-XDR-TB lineage2.1 None
SRR11828962 MDR-TB lineage2.1 None
SRR5074093 Sensitive lineage2.1 vn
SRR30180393 MDR-TB lineage2.1 None
SRR25628614 Sensitive lineage2.1 None
SRR3205959 Pre-XDR-TB lineage2.1 None
SRR22249459 Sensitive lineage2.1 None
ERR11049274 MDR-TB lineage2.1 None
SRR29050792 HR-TB lineage2.1 None
SRR11828975 Pre-XDR-TB lineage2.1 th
DRR473991 Sensitive lineage2.1 None
SRR5114019 Pre-XDR-TB lineage2.1 None
SRR21732823 Sensitive lineage2.1 None
SRR5073866 Sensitive lineage2.1 vn
ERR4811590 Sensitive lineage2.1 cn
SRR26399834 HR-TB lineage2.1 None
SRR21747057 MDR-TB lineage2.1 None
SRR10809158 Sensitive lineage2.1 None
SRR18913794 Sensitive lineage2.1 None
ERR4828765 HR-TB lineage2.1 vn
ERR8774471 Other lineage2.1 None
SRR10828183 Pre-XDR-TB lineage2.1 None
ERR2027263 Other lineage4 None
SRR27450294 Sensitive lineage2.1 None
DRR185119 Sensitive lineage2.1 vn
SRR26399473 Sensitive lineage2.1 None
ERR7737678 MDR-TB lineage2.1 None
SRR5065579 Sensitive lineage2.1 vn
SRR20970022 Sensitive lineage2.1 None
SRR5065487 Sensitive lineage2.1 vn
ERR4828364 HR-TB lineage2.1 None
ERR4828381 MDR-TB lineage2.1 vn
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4830275 Sensitive lineage2.1 vn
SRR5709748 Pre-XDR-TB lineage2.1 th
ERR11049075 Sensitive lineage2.1 None
ERR4831730 HR-TB lineage2.1 vn
SRR11828969 MDR-TB lineage2.1 None
DRR473714 Sensitive lineage2.1 None
SRR5114020 Pre-XDR-TB lineage2.1 None
SRR10040392 Pre-XDR-TB lineage2.1 None
SRR1710067 Sensitive lineage2.1 cn
ERR775761 Sensitive lineage2.1 th
SRR5710027 Pre-XDR-TB lineage2.1 th
SRR22250136 Other lineage2.1 None
SRR22424898 MDR-TB lineage1.1.2 None
SRR5065563 Sensitive lineage2.1 vn
SRR6153099 Sensitive lineage2.1 ca
SRR21689793 MDR-TB lineage2.1 None
ERR3273195 MDR-TB lineage2.1 None
SRR29464869 Sensitive lineage2.1 None
SRR30180243 MDR-TB lineage2.1 None
ERR11043101 Sensitive lineage2.1 None
ERR4831943 Pre-XDR-TB lineage2.1 vn
SRR5065467 Sensitive lineage2.1 vn
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR10040174 Pre-XDR-TB lineage2.1 None
SRR26399309 MDR-TB lineage2.1 None
ERR1035097 Pre-XDR-TB lineage2.1 vn
ERR9119325 MDR-TB lineage2.1 None
ERR7911304 MDR-TB lineage2.1 vn
SRR25206889 Pre-XDR-TB lineage2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR1140782 Sensitive lineage2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4828183 Other lineage2.1 vn
ERR4828248 Sensitive lineage2.1 vn
SRR29050950 MDR-TB lineage2.1 None
SRR5065297 Sensitive lineage2.1 vn
SRR11662182 MDR-TB lineage2.1 None
ERR7911277 MDR-TB lineage2.1 vn
SRR21576631 MDR-TB lineage2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR2513708 Sensitive lineage2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR5074068 Other lineage2.1 vn
SRR5074136 Sensitive lineage2.1 vn
SRR7517776 Sensitive lineage2.1 th
SRR11662223 MDR-TB lineage2.1 None
SRR26937040 MDR-TB lineage2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR7911125 RR-TB lineage2.1 vn
ERR13265748 Other lineage4.9;lineage6.3 None
SRR1710059 Sensitive lineage2.1 cn
SRR13423582 Pre-XDR-TB lineage2.1 None
SRR8237370 Sensitive lineage2.1 None
SRR26399189 Sensitive lineage2.1 None
SRR30180462 MDR-TB lineage2.1 None
SRR11715725 Pre-XDR-TB lineage2.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR28868762 Sensitive lineage2.1 None
SRR26112747 Sensitive lineage2.1 None
SRR26399764 Sensitive lineage2.1 None
SRR22250055 HR-TB lineage2.1 None
ERR4832049 MDR-TB lineage2.1 vn
SRR20969866 HR-TB lineage2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
DRR188602 Sensitive lineage2.1 None
ERR031469 Sensitive lineage2.1 None
SRR21576688 MDR-TB lineage2.1 None
ERR7737907 MDR-TB lineage2.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR28409308 Sensitive lineage2.1 None
DRR473886 Sensitive lineage2.1 None
ERR025881 Sensitive lineage2.1 None
ERR13290738 MDR-TB lineage2.1 None
SRR24083713 Sensitive lineage2.1;lineage4.1.2.1 None
SRR11662439 MDR-TB lineage2.1 None
ERR218154 Sensitive lineage2.1 None
SRR21746995 MDR-TB lineage2.1 None
SRR10809026 MDR-TB lineage2.1 None
SRR5067433 HR-TB lineage2.1 vn
SRR10808856 Sensitive lineage2.1 None
SRR24083714 Sensitive lineage2.1 None
SRR10809108 Sensitive lineage2.1 None
SRR12072598 Pre-XDR-TB lineage2.1 None
ERR775794 MDR-TB lineage2.1 th
SRR10809073 Sensitive lineage2.1 None
SRR1710070 Sensitive lineage2.1 cn
ERR4815441 HR-TB lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR26399175 HR-TB lineage2.1 None
ERR775784 MDR-TB lineage2.1 th
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR1710069 Sensitive lineage2.1 cn
SRR5709762 Pre-XDR-TB lineage2.1 th
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR10185946 Pre-XDR-TB lineage2.1 None
ERR4830262 Sensitive lineage2.1 vn
SRR5065278 Sensitive lineage2.1 vn
SRR11662677 Pre-XDR-TB lineage2.1 None
SRR28741104 MDR-TB lineage2.1 None
SRR21733227 HR-TB lineage2.1 None
SRR1710065 Sensitive lineage2.1 cn
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR775766 HR-TB lineage2.1 th
SRR26399943 HR-TB lineage2.1 None
SRR11662669 MDR-TB lineage2.1 None
ERR4816478 HR-TB lineage4 None
SRR5710022 Pre-XDR-TB lineage2.1 th
SRR5073882 Other lineage2.1 vn
ERR4832052 HR-TB lineage2.1 vn
SRR28119777 Other lineage4.9 None
SRR22250173 Sensitive lineage2.1 None
SRR29050781 HR-TB lineage2.1 None
ERR13290903 MDR-TB lineage2.1 None
SRR26112753 Sensitive lineage2.1 None
ERR9119373 Sensitive lineage2.1 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR2517258 Sensitive lineage2.1 nl
SRR21676416 Sensitive lineage2.1 None
SRR15368921 Sensitive lineage2.1 None
SRR1710058 Sensitive lineage2.1 cn
ERR11049648 Sensitive lineage2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR10808988 Sensitive lineage2.1 None
ERR12328202 Sensitive lineage2.1 None
SRR22249632 Other lineage2.1 None
ERR11081260 Sensitive lineage2.1 None
SRR26399799 HR-TB lineage2.1 None
SRR11662503 MDR-TB lineage2.1 None
SRR14519949 Other lineage2.1 None
ERR9119371 Sensitive lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3273141 RR-TB lineage2.1 None
ERR4832016 MDR-TB lineage2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR552761 Other lineage2.1 de
SRR11662457 MDR-TB lineage2.1 None
ERR4828573 Other lineage2.1 None
SRR11828968 MDR-TB lineage2.1 None
ERR4828569 Other lineage2.1 vn
DRR261044 Sensitive lineage2.1 None
SRR26558642 HR-TB lineage2.1 None
SRR26936963 MDR-TB lineage2.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
ERR13290692 HR-TB lineage2.1 None
SRR5067554 Other lineage2.1 vn
SRR10828645 MDR-TB lineage2.1 None
ERR13290725 MDR-TB lineage2.1 None
ERR2503370 Sensitive lineage2.1 fi
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR14519689 Sensitive lineage2.1 None
ERR13291023 MDR-TB lineage2.1 None
SRR11715717 Sensitive lineage2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR11715720 Pre-XDR-TB lineage2.1 None
SRR11715716 Pre-XDR-TB lineage2.1 None
ERR4832015 HR-TB lineage2.1 vn
ERR538432 Sensitive lineage2.1 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5073761 Sensitive lineage2.1 vn
SRR6152685 Other lineage2.1 ca
SRR28741119 MDR-TB lineage2.1 None
SRR11828967 MDR-TB lineage2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR718276 Sensitive lineage2.1 th
SRR21576582 MDR-TB lineage2.1 None
SRR1710072 Sensitive lineage2.1 cn
ERR9786444 Sensitive lineage4.8 None
SRR18911922 Sensitive lineage2.1 None
ERR3273198 MDR-TB lineage2.1 None
SRR11828973 Pre-XDR-TB lineage2.1 th
SRR3675216 Other lineage2.1;lineage4.9 None
SRR11828990 Pre-XDR-TB lineage2.1 None
SRR11662277 Pre-XDR-TB lineage2.1 None
SRR6480443 Sensitive lineage2.1 None
SRR10828184 Pre-XDR-TB lineage2.1 None
SRR29051077 Other lineage4.9 None
ERR4828594 Sensitive lineage2.1 vn
ERR3275732 Sensitive lineage2.1 nl
DRR034421 Other lineage2.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR5709897 Pre-XDR-TB lineage2.1 th
SRR26399375 Sensitive lineage2.1 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR21689528 Other lineage2.1 None
SRR26159043 Other lineage4.9 None
SRR29017311 Sensitive lineage2.1 None
ERR13285436 Other lineage2.1 None
SRR5709898 Pre-XDR-TB lineage2.1 th
SRR28741114 MDR-TB lineage2.1 None
ERR4831605 MDR-TB lineage2.1 vn
ERR7911290 MDR-TB lineage2.1 vn
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4828247 HR-TB lineage2.1 vn
SRR5065411 HR-TB lineage2.1 vn
SRR13180316 HR-TB lineage2.1 None
SRR5067550 Other lineage2.1 vn
SRR5709822 MDR-TB lineage2.1 th
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR12006591 Sensitive lineage2.1 None
SRR7069733 Sensitive lineage2.1 None
SRR11662530 MDR-TB lineage2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR20632799 Pre-XDR-TB lineage2.1 None
SRR21747001 RR-TB lineage2.1 None
ERR11044724 Sensitive lineage2.1 None
SRR21576561 RR-TB lineage2.1 None
SRR29017284 HR-TB lineage2.1 None
SRR5709925 Sensitive lineage2.1 th
SRR11828976 Pre-XDR-TB lineage2.1 th
SRR6045399 Other M.canetti;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR13290906 MDR-TB lineage2.1 None
ERR4831969 Pre-XDR-TB lineage2.1 vn
ERR3283044 Other lineage4 None
SRR22251672 Other lineage2.1 None
SRR20969515 HR-TB lineage2.1 None
SRR20969633 HR-TB lineage2.1 None
SRR5065617 Sensitive lineage2.1 vn
SRR5065678 Sensitive lineage2.1 vn
ERR3804169 HR-TB lineage4.1.3 None
ERR751993 Sensitive lineage2.1 th
ERR4800341 Other lineage3 None
SRR11662162 Pre-XDR-TB lineage2.1 None
SRR6152853 Sensitive lineage2.1 ca
ERR13290828 MDR-TB lineage2.1 None
SRR28170771 Sensitive lineage2.1 None
SRR26399738 HR-TB lineage2.1 None
SRR11828965 MDR-TB lineage2.1 None
ERR775773 Sensitive lineage2.1 th
SRR20969663 MDR-TB lineage2.1 None
SRR21677266 Sensitive lineage2.1 None
ERR4828727 Sensitive lineage2.1 vn
SRR3675449 Other M.canetti;lineage4.9 None
ERR3275582 Sensitive lineage2.1 nl
SRR11828963 MDR-TB lineage2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5065368 Sensitive lineage2.1 vn
SRR10808634 RR-TB lineage2.1 None
ERR8773679 HR-TB lineage2.1 None
SRR11828979 Pre-XDR-TB lineage2.1 th
ERR4831344 Sensitive lineage2.1 de
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR21690953 Sensitive lineage2.1 None
SRR28339298 Pre-XDR-TB lineage2.1 None
DRR130077 Pre-XDR-TB lineage2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1011503 Sensitive lineage2.1 None
SRR5073921 Sensitive lineage2.1 vn
SRR5073739 HR-TB lineage2.1 vn
SRR26399621 Sensitive lineage2.1 None