EBG00000313325 - n.365A>T
Drug resistance types
87 Sensitive
11 RR-TB
23 HR-TB
21 MDR-TB
22 Pre-XDR-TB
2 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 16 |
| lineage4 | 4 |
| lineage4.1.1.3 | 4 |
| lineage4.4.1.1 | 9 |
| lineage4.6.1.1 | 5 |
| lineage4.8.1 | 1 |
| lineage2.2 | 4 |
| 12 | |
| lineage4.3.4.2 | 1 |
| lineage4.9 | 20 |
| lineage4.1.1 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.4.1 | 1 |
| lineage4.3.2.1 | 3 |
| La1.8.1 | 13 |
| lineage2.2.1 | 24 |
| lineage4.3.3 | 10 |
| lineage4.6 | 2 |
| lineage3 | 11 |
| lineage2.2.1.1 | 3 |
| lineage4.6.1 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.8 | 8 |
| La1 | 2 |
| lineage4;La1 | 1 |
| lineage1.1.2 | 23 |
| lineage4.6.4 | 1 |
| La1.3 | 1 |
| lineage2.2.2 | 13 |
| lineage1.2.2.2 | 5 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage2 | 1 |
| lineage1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.5 | 1 |
| lineage5.1.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.2.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 220 |
Geographic prevalence
Country level data for this variant is available for 21 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | ERR1199062 | Sensitive | lineage4.6.1.1 | ug | SRR6982410 | Other | lineage4.8.1 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6896534 | Sensitive | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6981912 | Sensitive | None | ERR5162108 | Other | La1.8.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6855708 | Sensitive | lineage2.2.1 | None | SRR6981962 | Sensitive | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982070 | RR-TB | None | ERR5162122 | HR-TB | lineage4.9 | None | SRR7131168 | Other | lineage4.1.2.1 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR7131048 | Other | lineage4.4.1.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | ERR323039 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR10796627 | Other | lineage4 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796630 | HR-TB | None | ERR144568 | Pre-XDR-TB | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR144557 | Sensitive | lineage4.8 | None | ERR3468584 | Sensitive | lineage4.9 | None | ERR3468577 | HR-TB | La1 | None | ERR3468601 | HR-TB | La1.8.1 | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4187666 | Other | La1.8.1 | None | ERR4187921 | Other | None | ERR4187720 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4188215 | Other | La1.8.1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4407552 | Sensitive | lineage4.1.2.1 | None | ERR4188396 | Sensitive | La1 | None | ERR4188369 | Other | La1.8.1 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR702437 | HR-TB | lineage4.6.4 | None | ERR4769479 | Other | La1.3 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809194 | RR-TB | lineage2.2.1 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR779913 | MDR-TB | lineage4.1.2.1 | pe | ERR751317 | Sensitive | lineage4.9 | None | ERR9993029 | MDR-TB | lineage4.3.3 | None | ERR9992612 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992711 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992725 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992790 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992817 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992624 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | ERR9992810 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | ERR9993028 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | ERR9993030 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9993119 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993145 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | ERR9993167 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993196 | XDR-TB | lineage2.2.2 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | ERR9993227 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013531 | MDR-TB | lineage4.9 | None | ERR9993215 | XDR-TB | lineage2.2.2 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR10315745 | Sensitive | lineage2.2.1.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1169576 | Sensitive | lineage1.1.2 | None | SRR1106670 | Other | lineage4.9 | None | SRR11349174 | MDR-TB | lineage4.4.1.1.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1173111 | Sensitive | lineage1.1.2 | None | SRR1172300 | Sensitive | lineage1.1.2 | None | SRR1172322 | Sensitive | lineage1.1.2 | None | SRR1172943 | HR-TB | lineage3 | None | SRR1173013 | Sensitive | lineage1.1.2 | None | SRR1172267 | Sensitive | lineage1.1.2 | None | SRR1172347 | Sensitive | lineage1.1.2 | None | SRR1172949 | Sensitive | lineage1.1.2 | None | SRR1173045 | Sensitive | lineage3 | None | SRR1173597 | Sensitive | lineage1.2.2.2 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR1173599 | Sensitive | lineage1.1.2 | None | SRR1173694 | Sensitive | lineage1.1.2 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1174291 | HR-TB | lineage1.1.2 | None | SRR1173692 | HR-TB | lineage1.2.2.2 | None | SRR1173874 | Other | lineage1.1.2 | None | SRR1174327 | Sensitive | lineage1.2.2.2 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1180972 | MDR-TB | lineage2.2.1 | None | SRR1181051 | MDR-TB | lineage4.4.1.1 | None | SRR1180947 | Sensitive | lineage4.8 | None | SRR1180999 | Sensitive | lineage4.8 | None | SRR1181120 | MDR-TB | lineage2.2.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR1183143 | Sensitive | lineage1.1.2 | None | SRR12199485 | Other | lineage2 | None | SRR16156291 | Other | lineage4.9 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR1791910 | Other | None | SRR1181319 | Other | lineage2.2.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR12199427 | Sensitive | lineage1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR6207280 | MDR-TB | lineage4.4.1.1 | None | SRR18213736 | MDR-TB | lineage3 | None | ERR4815898 | Other | lineage3 | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR4815278 | Other | lineage4.8 | None | SAMN02598976 | Sensitive | lineage1.2.2.2 | None | SAMN02599170 | Sensitive | lineage1.1.2 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR4815777 | Other | lineage4.9 | None | SRR3105762 | HR-TB | None | ERR4814568 | Other | lineage4.1.2.1 | gb | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4815985 | Other | lineage5.1.2 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4817102 | Sensitive | None | SRR6280270 | Sensitive | lineage2.2.1 | cn | SRR6280216 | RR-TB | lineage2.2.2 | cn | ERR4816200 | Sensitive | None | ERR2510693 | Pre-XDR-TB | lineage2.2.1 | it | SRR4033383 | Sensitive | lineage2.2.1 | za | ERR4816755 | Other | lineage4.1.1.3 | None | SRR4033342 | Sensitive | lineage2.2.1 | za | SRR4033407 | Sensitive | lineage2.2.1 | None | ERR2510807 | Other | lineage4.6 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR2510831 | Other | lineage4.3.3 | None | SRR4037868 | Sensitive | lineage4.3.2.1 | None | ERR4818188 | Other | lineage4.1.2.1 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR4818436 | Other | lineage4.8 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR1199065 | Sensitive | lineage4.6.1 | None | ERR4817551 | Other | lineage4.9 | None | ERR4819140 | Other | lineage4.1.2.1 | None | SRR6280271 | Sensitive | lineage2.2.1 | cn | ERR4820332 | Other | lineage2.2.1 | None | ERR4819348 | Sensitive | lineage4.1.2.1 | gb | SRR6280286 | Sensitive | lineage2.2.1 | None | SAMN02599061 | MDR-TB | lineage3 | None | SAMN02598961 | Sensitive | lineage1.1.2 | None | ERR4819525 | Other | lineage3 | None | ERR4819576 | Other | lineage4.2.2 | gb | SAMN02598978 | HR-TB | lineage1.1.2 | None | SRR6045312 | Other | lineage1.1.3.3 | None | ERR4820524 | Sensitive | lineage4.9 | None | ERR4821736 | HR-TB | lineage2.2.1 | gb | ERR2515848 | Sensitive | lineage2.2.1 | None | ERR2514561 | Sensitive | lineage4.1.1 | gb | SAMN02599075 | Sensitive | lineage1.1.2 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR4821880 | HR-TB | lineage1.1.2 | None | SRR6045683 | Other | lineage3.1.2 | None | SAMN02598962 | Sensitive | lineage1.1.2 | in | ERR4829036 | Other | lineage4.8 | None | ERR4829623 | Sensitive | lineage4.8 | None | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR4829618 | Sensitive | lineage4.1.2.1 | it | ERR4828747 | Sensitive | lineage2.2.1 | None | ERR4829634 | Sensitive | lineage4.3.3 | it | ERR4829196 | Other | lineage4.1.2 | None | ERR4829192 | Other | lineage4.4.1.1 | None | ERR4828642 | HR-TB | lineage2.2.1 | None | ERR4829674 | Sensitive | lineage4.1.2.1 | it | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR4829692 | Sensitive | lineage4.1.2.1 | None | SRR6046815 | Other | lineage3 | None |
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