Rv1305 - c.63C>G
Drug resistance types
27 Sensitive
1 RR-TB
97 HR-TB
6 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| 119 | |
| lineage4 | 28 |
| lineage2.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9 | 6 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1 | 1 |
| La1.8.1 | 1 |
| lineage2.2.1 | 3 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2 | 3 |
| lineage4.2.1.1 | 1 |
| lineage1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3.1 | 2 |
| lineage4.8 | 1 |
| lineage3 | 2 |
| La1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 192 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1172234 | Other | None | SRR1169306 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173629 | Other | None | SRR1173400 | Other | None | SRR1184380 | HR-TB | None | SRR1173778 | Other | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR14782405 | HR-TB | None | SRR25827682 | Other | None | SRR19304036 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675482 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | SRR3675265 | Other | lineage4 | None | ERR176643 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675311 | Other | None | SRR3675502 | Other | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR4035833 | Other | lineage4.1.2 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR1035162 | Other | None | ERR1023509 | Other | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341418 | Other | None | SRR5341333 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR6359082 | Other | lineage4.9 | None | ERR2693231 | Other | None | ERR2693254 | Other | None | SRR6045555 | HR-TB | None | ERR278594 | HR-TB | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045952 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6789626 | Other | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502532 | HR-TB | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | ERR323043 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR1034652 | Other | None | ERR349264 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3439432 | Other | None | ERR349296 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797061 | Other | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR4798431 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR3797083 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR736835 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR702406 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR702404 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736874 | HR-TB | None | ERR736839 | Other | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786671 | Other | None |
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