EBG00000313325 - n.1473G>A
Drug resistance types
80 Sensitive
9 RR-TB
13 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1 | 1 |
| lineage4.1.2.1 | 8 |
| lineage4.8 | 8 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage3 | 11 |
| 9 | |
| lineage3.1.1 | 5 |
| lineage4.9 | 12 |
| lineage4 | 3 |
| lineage2.2.1 | 28 |
| lineage1.2.2.2 | 4 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.2 | 4 |
| lineage4.1.1 | 5 |
| lineage4.4.1.1 | 6 |
| lineage1.1.3.2 | 4 |
| lineage4.4 | 1 |
| lineage1 | 1 |
| lineage4.3.2.1 | 5 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.3 | 6 |
| lineage4.7 | 3 |
| lineage4.1.2 | 3 |
| lineage2.2 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.1.4 | 1 |
| lineage4.6 | 16 |
| La1.2 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1 | 1 |
| lineage1.1.3.1 | 4 |
| lineage3.1.2 | 2 |
| La1.7.1 | 1 |
| lineage4.5 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 4 |
| lineage4.6.4 | 1 |
| lineage4.8.2 | 1 |
| lineage4.6.1.1 | 1 |
| La3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 189 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045778 | Other | lineage3.1 | None | SRR5818670 | Other | lineage4.1.2.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045992 | Other | lineage3 | None | SRR6045289 | Other | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046208 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6046291 | Other | lineage3 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | ERR4828514 | HR-TB | lineage2.2.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR4832020 | MDR-TB | lineage2.2.1.1 | vn | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6046743 | Other | lineage3 | None | SRR6982078 | Sensitive | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982196 | Sensitive | None | SRR6832359 | Sensitive | lineage2.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982405 | Sensitive | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR7645900 | Sensitive | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | ERR3283013 | MDR-TB | lineage4 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3470627 | Sensitive | lineage4.6 | None | ERR3470610 | Sensitive | lineage4.6 | None | ERR3470594 | Sensitive | lineage4.6 | None | ERR3797043 | HR-TB | None | ERR3470663 | Sensitive | lineage3 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4772206 | Other | La1.2 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR718429 | Sensitive | lineage2.2.1.1 | th | ERR9117681 | Other | lineage4.3.3 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR9117759 | Other | lineage3 | None | ERR9892004 | Sensitive | lineage4.6 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR11972311 | Pre-XDR-TB | None | SRR12199474 | Sensitive | lineage1.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR15316290 | RR-TB | lineage2.2.1 | None | SRR1239337 | Other | None | SRR13199734 | Other | La1.2 | None | SRR13423579 | RR-TB | lineage2.2.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR15316284 | RR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21240064 | Sensitive | lineage4.3.3 | None | SRR21277822 | Sensitive | lineage2.2.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | ERR4815795 | Other | lineage1.1.2 | None | SRR3675491 | Other | lineage4.7 | None | ERR4814901 | Other | lineage2.2.1 | gb | ERR1679639 | Other | lineage4.6.4 | None | ERR1665402 | MDR-TB | lineage2.2.1 | None | ERR4814754 | Sensitive | lineage4.6.2.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4816646 | Sensitive | lineage4.6 | gb | ERR4815551 | Other | lineage2.2.1 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR3275980 | HR-TB | lineage4.6 | nl | ERR4816818 | Other | lineage4.8.2 | None | ERR4816699 | Other | lineage4.6 | None | ERR3276058 | Sensitive | lineage4.6 | nl | ERR4817710 | Other | lineage1.1.2 | None | ERR4818188 | Other | lineage4.1.2.1 | None | ERR2512460 | Other | lineage1.2.2.2 | gb | ERR4818663 | Other | lineage3 | None | ERR4817877 | Sensitive | lineage4.6 | gb | ERR4817917 | Other | lineage2.2.1 | None | ERR4818772 | Other | lineage4.6 | gb | ERR2513223 | Other | lineage4.1.2.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR4818538 | Other | lineage3 | gb | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4818949 | Sensitive | lineage3.1.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819353 | Sensitive | lineage4.6.1.1 | gb | ERR2513681 | Other | lineage1.1.2 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819487 | Sensitive | lineage4.6 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR4819525 | Other | lineage3 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR2514521 | Sensitive | lineage4.8 | gb | ERR4819790 | Other | lineage4.6 | gb | ERR2514652 | Other | lineage4.7 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514908 | Sensitive | lineage3 | None | ERR4820546 | Sensitive | lineage4.6 | None | SRR6046090 | HR-TB | lineage4.6 | gb | ERR2515013 | Sensitive | lineage2.2.1 | None | ERR4820622 | Other | lineage4.3.4.2 | None | SRR6046087 | Other | None | SRR6045458 | Sensitive | lineage4.1.2.1 | gb | ERR4820194 | Other | La3 | None | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR4821229 | Other | lineage2.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821927 | HR-TB | lineage4.3.4.1 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR4821892 | Sensitive | lineage4.6 | gb | ERR4822110 | Other | lineage3.1.2.1 | None | ERR4822046 | Sensitive | lineage4.6 | None | SRR6045683 | Other | lineage3.1.2 | None |
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