EBG00000313325 - n.1278A>C
Drug resistance types
78 Sensitive
6 RR-TB
8 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.3 | 1 |
| La1.2 | 1 |
| La1.7.1 | 1 |
| lineage3 | 3 |
| lineage4.1.1 | 5 |
| lineage4.3.4.2.1 | 8 |
| lineage4.4.1.1 | 9 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage4.3.2.1 | 10 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1 | 2 |
| lineage1.1.3.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.8 | 7 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2 | 5 |
| lineage2.2.1 | 18 |
| lineage4.3.3 | 9 |
| lineage4.9 | 11 |
| lineage4.1.2.1 | 2 |
| lineage4 | 3 |
| 4 | |
| lineage2.2.1.1 | 1 |
| lineage4.4 | 1 |
| lineage1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.7 | 2 |
| lineage2.2 | 1 |
| lineage4.3 | 1 |
| La1.8.1 | 9 |
| lineage4.3.4.2 | 1 |
| lineage4.9;La1.8 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15522852 | Sensitive | lineage1.1.3.3 | None | SRR13199734 | Other | La1.2 | None | SRR18391772 | Other | La1.7.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR2101651 | Sensitive | lineage4.3.2.1 | None | SRR2101661 | Sensitive | lineage4.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | ERR2515364 | Sensitive | lineage4.1.2 | za | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21764246 | Other | lineage4.9 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR2179857 | RR-TB | lineage4 | None | ERR2515460 | Sensitive | lineage4.8 | za | ERR2515484 | Other | lineage4.8 | None | SRR6045205 | Sensitive | lineage4.9 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6982078 | Sensitive | None | ERR279477 | Sensitive | lineage4.4.1.1.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982170 | Sensitive | lineage4.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982196 | Sensitive | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982394 | Sensitive | lineage4.3.2.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982033 | Sensitive | lineage2.2.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982405 | Sensitive | None | ERR5087912 | Other | La1.8.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR5162118 | Other | La1.8.1 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | ERR5162133 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4188253 | Other | La1.8.1 | None | ERR4188010 | Other | La1.8.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4627379 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10482944 | Other | La1.8.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None |
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