EBG00000313325 - n.1278A>C


Drug resistance types
76 Sensitive 6 RR-TB 8 HR-TB 4 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 33 Other
lineage Counts
lineage Count
lineage4.3.3 9
lineage4.3.2.1 9
lineage4.4.1.1.1 3
lineage4.1 2
lineage4.1.1.3 2
lineage2.2.1 18
lineage3 3
lineage4.9 11
4
lineage4.4.1.1 9
lineage4 3
lineage2.2.1.1 1
lineage4.8 7
lineage4.1.2.1 1
lineage4.4 1
lineage4.1.1 5
lineage1.1.3.2 2
lineage4.3.4.2.1 8
lineage1 1
lineage4.7 2
lineage3.1.1 2
lineage4.1.2 4
lineage4.1.2;lineage3.1 2
lineage2.2 1
lineage4.3.4.1 3
lineage4.3 1
La1.8.1 9
lineage4.3.4.2 1
lineage4.9;La1.8 1
lineage1.1.3.3 1
lineage4.4.1.2 1
La1.2 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 129
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2515148 Sensitive lineage4.3.3 None
ERR2515721 Sensitive lineage4.3.2.1 None
SRR2101636 Other lineage4.3.2.1 None
SRR2101659 Other lineage4.4.1.1.1 None
SRR2101661 Sensitive lineage4.1 None
SRR2101709 Sensitive lineage4.1.1.3 None
ERR2515854 Sensitive lineage2.2.1 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR6045205 Sensitive lineage4.9 None
SRR6982092 Other lineage4.3.2.1 None
SRR6982078 Sensitive None
ERR279477 Sensitive lineage4.4.1.1.1 None
SRR6982090 RR-TB lineage4.4.1.1 None
SRR6856087 Sensitive lineage4 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6982102 Other lineage2.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6982105 Sensitive lineage2.2.1.1 None
SRR6982106 Sensitive lineage4.8 None
SRR6896255 Sensitive lineage4.3.3 None
SRR6982414 Sensitive lineage4.9 None
SRR6982148 Sensitive lineage2.2.1 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6982146 Sensitive lineage4.1.1.3 None
SRR6982196 Sensitive None
SRR6982170 Sensitive lineage4.1 None
SRR6896348 Sensitive lineage4.1.2.1 None
SRR6982195 RR-TB lineage4.4 None
SRR6982427 Sensitive lineage4.1.1 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982430 Other lineage4.3.4.2.1 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6982227 Other lineage4.1.1 None
SRR6982198 HR-TB lineage1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982292 Other lineage4.4.1.1.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982313 Sensitive lineage4.3.4.2.1 None
SRR6982334 Sensitive lineage4.4.1.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6982328 HR-TB lineage3.1.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6855718 Sensitive lineage4.8 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6981939 Sensitive lineage4.3.4.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6981975 Sensitive lineage4.7 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6981981 Other lineage4.3.3 None
SRR6981978 Sensitive lineage4.3.4.2.1 None
SRR6982011 Other lineage4.1.1 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
SRR6982033 Sensitive lineage2.2.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6855917 Other lineage4.8 None
SRR6982035 Sensitive lineage4.9 None
SRR6982394 Sensitive lineage4.3.2.1 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982405 Sensitive None
SRR6982057 Pre-XDR-TB lineage4.3 None
SRR6982056 Sensitive lineage4.3.4.2.1 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982484 Sensitive lineage3.1.1 None
SRR6982075 Sensitive lineage3 None
SRR6982076 Sensitive lineage4.9 None
ERR5087912 Other La1.8.1 None
SRR6856032 Sensitive lineage2.2.1 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR5162118 Other La1.8.1 None
SRR6982514 Sensitive lineage4.3.3 None
ERR5162133 Other La1.8.1 None
ERR5311080 Other La1.8.1 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR7645800 MDR-TB lineage2.2.1 None
SRR6982558 Other lineage4.3.4.2 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR3283021 HR-TB None
ERR4769419 Other lineage4.9 None
ERR4188010 Other La1.8.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4188253 Other La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR4627379 Other La1.8.1 None
ERR4627392 Other La1.8.1 None
ERR4769527 Sensitive lineage4.9 None
ERR4769507 Sensitive lineage4.9 None
SRR15522852 Sensitive lineage1.1.3.3 None
ERR2515460 Sensitive lineage4.8 za
ERR736822 Sensitive lineage4.4.1.2 None
SRR1011488 Other lineage2.2.1 None
SRR10482944 Other La1.8.1 None
ERR8025347 Sensitive lineage4.9 None
SRR1062859 Sensitive lineage2.2.1 None
SRR13199734 Other La1.2 None
SRR17856664 Sensitive lineage3 None
SRR18391772 Other La1.7.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR2101666 Sensitive lineage4.8 None
SRR2101681 Sensitive lineage4.8 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101773 Sensitive lineage4.3.4.2.1 None
SRR2101711 Sensitive lineage2.2.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR2101802 Sensitive lineage4.4.1.1 None
ERR161170 Sensitive lineage4.3.4.1 None
SRR2101827 Sensitive lineage4.3.4.2.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21714045 HR-TB lineage2.2.1 None
SRR21764246 Other lineage4.9 None
ERR2515484 Other lineage4.8 None
ERR2179857 RR-TB lineage4 None
SAMN02350446 Sensitive lineage2.2.1 None