EBG00000313325 - n.1278A>C


Drug resistance types
77 Sensitive 2 RR-TB 5 HR-TB 2 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 23 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 5
lineage2.2.1 15
lineage4.4.1.1 10
lineage4.1.2 4
lineage4.1.1.3;lineage4.9 1
lineage4.8 6
La1.8.1 11
lineage4.1.1.1 3
lineage4.9 12
lineage4.3.3 9
1
lineage4.3.2.1 7
lineage1.1.3.3 1
lineage3 2
lineage4.7 2
lineage1 1
lineage4.4.1.1.1 2
lineage3.1.1 2
La1.2.BCG 2
lineage2.2.1;lineage4.9 1
lineage4.3.2.1;lineage4.9 1
lineage1.1.3.2 2
lineage4.1.1.3 2
lineage4.1 1
lineage4.3.4.1 2
lineage4 1
La1.8.X-unk6 1
La1.7.1 1
lineage4.3.4.2 1
La1.2 1
spoligotype Counts
spoligotype Count
None 110
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6981939 Sensitive lineage4.3.4.2.1 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982102 Sensitive lineage2.2.1 None
SRR2101711 Sensitive lineage2.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6855963 Sensitive lineage2.2.1 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6982043 Sensitive lineage4.4.1.1 None
ERR2515484 Sensitive lineage4.8 None
ERR4188253 Other La1.8.1 None
SRR6982037 Sensitive lineage4.1.1.1 None
ERR8025347 Sensitive lineage4.9 None
SRR7240398 Other La1.8.1 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
SRR6981981 Sensitive lineage4.3.3 None
ERR3335798 MDR-TB lineage2.2.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR6982196 Sensitive None
SRR6982048 Sensitive lineage4.3.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR15522852 Sensitive lineage1.1.3.3 None
SRR6982514 Sensitive lineage4.3.3 None
SRR6855915 Sensitive lineage4.9 None
SRR6896255 Sensitive lineage4.3.3 None
SRR7240506 Other La1.8.1 None
SRR17856664 Sensitive lineage3 None
ERR3797047 MDR-TB lineage4.9 None
SRR6981975 Sensitive lineage4.7 None
ERR2515854 Sensitive lineage2.2.1 None
SRR6982198 HR-TB lineage1 None
SRR6982092 Other lineage4.3.2.1 None
ERR4769419 Sensitive lineage4.9 None
SRR1011488 Sensitive lineage2.2.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6982334 Sensitive lineage4.4.1.1 None
SRR2101659 Other lineage4.4.1.1.1 None
SRR6982106 Sensitive lineage4.8 None
SRR2101617 Sensitive lineage4.1.1.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6982057 HR-TB lineage4.3.3 None
SRR6982328 Sensitive lineage3.1.1 None
SRR1915486 HR-TB La1.2.BCG None
SRR2101636 Other lineage4.3.2.1 None
SRR7240324 Other La1.8.1 None
SRR6982398 Sensitive lineage2.2.1;lineage4.9 None
ERR4188255 Sensitive lineage4.9 None
SRR6982076 Sensitive lineage4.9 None
SRR21675637 Sensitive lineage4.3.3 None
SRR6982195 Sensitive lineage4.4.1.1 None
SRR6982227 Sensitive lineage4.9 None
ERR2515460 Other lineage4.8 za
SRR2101803 Sensitive lineage4.3.3 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982175 Sensitive lineage1.1.3.2 None
SRR6982011 Sensitive lineage4.1.1.1 None
SRR6982405 Sensitive lineage4.4.1.1 None
SRR2101663 Sensitive lineage1.1.3.2 None
SRR1915484 Other La1.2.BCG None
SRR6982056 Other lineage4.3.4.2.1 None
SRR2101709 Sensitive lineage4.1.1.3 None
SRR2101827 Sensitive lineage4.3.4.2.1 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
SRR2101661 Sensitive lineage4.1 None
ERR5311080 Other La1.8.1 None
SRR6855917 Sensitive lineage4.8 None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR6982104 Sensitive lineage2.2.1 None
ERR5162118 Other La1.8.1 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR2515721 Sensitive lineage4.3.2.1 None
SRR6982050 Sensitive lineage4.3.4.1 None
ERR4188010 Other La1.8.1 None
SRR6982385 Sensitive lineage4.1.2 None
ERR5162133 Sensitive La1.8.1 None
SRR6982292 Other lineage4.4.1.1.1 None
ERR2179857 Sensitive lineage4 None
SRR2101689 Sensitive lineage4.3.4.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR6045205 Sensitive lineage4.9 None
SRR7240420 Other La1.8.X-unk6 None
SRR7240537 Other La1.8.1 None
ERR4627379 Other La1.8.1 None
SRR18391772 Other La1.7.1 None
ERR4627392 Other La1.8.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
ERR2515148 Sensitive lineage4.3.3 None
SRR6982148 Sensitive lineage2.2.1 None
SRR6855718 Sensitive lineage4.8 None
SRR2101681 Sensitive lineage4.8 None
SRR6982022 Sensitive lineage4.4.1.1 None
ERR4769507 Sensitive lineage4.9 None
SRR21714045 Other lineage2.2.1 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6856032 Sensitive lineage2.2.1 None
ERR3283021 HR-TB lineage4.9 None
SRR6982146 Sensitive lineage4.1.1.3 None
SRR6982337 Sensitive lineage4.7 None
SRR10129602 Sensitive lineage4.3.4.2 None
SRR6982484 Other lineage3.1.1 None
SRR21764246 Other lineage4.9 None
SRR6982077 Sensitive lineage4.3.2.1 None
SRR13199734 Other La1.2 None