EBG00000313325 - n.1449delA
Drug resistance types
20 Sensitive
11 RR-TB
10 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 7 |
| lineage3 | 11 |
| lineage2.2.1 | 13 |
| lineage4.2.2.2 | 3 |
| lineage4.4.1.1 | 6 |
| lineage4.1.3 | 2 |
| lineage4.1.2.1 | 13 |
| lineage4.6.5 | 1 |
| lineage4.2.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 10 |
| lineage3.1.2.1 | 3 |
| lineage4.1.2 | 4 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3.1.2.2 | 1 |
| La1.8.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.3.4.1 | 1 |
| La1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage3;lineage4.9 | 2 |
| La1.6 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675461 | RR-TB | lineage4.9 | None | ERR2512606 | HR-TB | lineage3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR7069030 | Other | lineage3 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | SRR6046848 | Other | lineage4.6.5 | None | ERR4821746 | Sensitive | lineage4.4.1.1 | gb | ERR4818522 | Other | lineage3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR4820690 | Sensitive | lineage4.1.1 | gb | ERR4821958 | Other | lineage4.3.3 | gb | SRR6046159 | Other | lineage4.8.2 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR4820777 | Sensitive | lineage4.1.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR2515055 | Sensitive | lineage3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4586795 | Other | La1.8.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR2512986 | Other | lineage3 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR4769495 | Other | La1.3 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4822176 | Other | lineage4.1.1.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | SRR6046442 | Other | lineage3 | None | ERR2514514 | Other | lineage3 | gb | ERR4809049 | Sensitive | lineage4.1.2 | za | ERR4815452 | Other | lineage4.3.3 | None | SRR5818672 | Other | lineage1.2.2.2 | None | ERR10796599 | Other | lineage4.8 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4820026 | Other | lineage3 | None | ERR4820968 | Sensitive | lineage4.1.2.1 | gb | SRR5007165 | Other | lineage3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4819017 | Other | lineage3 | None | SRR7069518 | Other | lineage4.8 | None | ERR4817834 | Sensitive | lineage1.1.2 | gb | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR4814356 | Other | lineage3.1.2 | None | ERR4815425 | Other | lineage4.5 | gb | ERR4816283 | Other | lineage4.1.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR4820397 | Other | lineage4.9 | None | ERR4821773 | Other | La1.6 | None | ERR10796577 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR4816866 | Other | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4821310 | Other | lineage5 | None |
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