EBG00000313325 - n.824_825insTAGA
Drug resistance types
67 Sensitive
4 RR-TB
8 HR-TB
12 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 11 |
| lineage6 | 2 |
| lineage4.1.2.1 | 4 |
| lineage6.3.1 | 2 |
| lineage1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| La1.6 | 2 |
| lineage2.2.1 | 21 |
| lineage3 | 3 |
| lineage4.1.1.3 | 2 |
| La1.7.1 | 1 |
| lineage4.1.1 | 7 |
| 1 | |
| lineage1.1.3.2 | 3 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage4.9 | 15 |
| lineage4.4.1.1 | 5 |
| lineage4.8 | 5 |
| lineage4.3.4.2.1 | 5 |
| lineage4.2 | 1 |
| lineage4.3.3 | 6 |
| lineage4.6.4 | 1 |
| lineage4.3.2.1 | 9 |
| lineage4.3.4.1 | 2 |
| lineage4 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.4 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.7 | 1 |
| lineage2.2 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage4.9;La1.8 | 1 |
| La1.2 | 2 |
| lineage4.2.1 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 133 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10482944 | Other | La1.8.1 | None | ERR9787173 | Sensitive | lineage6 | None | ERR9786543 | Sensitive | lineage4.1.2.1 | None | ERR9787167 | Sensitive | lineage6.3.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10993956 | Other | La1.6 | None | SRR10993936 | Other | La1.6 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR16627757 | Sensitive | lineage3 | None | SRR1792359 | Other | La1.8.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792267 | Other | La1.8.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR19576436 | Sensitive | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101647 | Sensitive | lineage4.9 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR2101816 | Other | lineage4.8 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | SRR5067459 | HR-TB | lineage4.2 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21764250 | Other | lineage4.9 | None | SRR8692842 | Other | lineage4.9 | None | SRR6824519 | MDR-TB | lineage2.2.1 | cn | SRR21714045 | HR-TB | lineage2.2.1 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR2101636 | Other | lineage4.3.2.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6045205 | Sensitive | lineage4.9 | None | ERR3148213 | Pre-XDR-TB | lineage4.3.4.1 | mx | SRR6856087 | Sensitive | lineage4 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982419 | Other | lineage4.8 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6981997 | Sensitive | lineage4.9 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982033 | Sensitive | lineage2.2.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | ERR5162133 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR5162118 | Other | La1.8.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324355 | HR-TB | lineage4.1.1.3 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR4188010 | Other | La1.8.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3804142 | Sensitive | lineage6.3.1 | None | ERR3804115 | Sensitive | lineage6 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4188253 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR4769503 | Other | La1.2 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | ERR4772230 | Other | La1.2 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR6866714 | Sensitive | lineage2.2.1 | None | SRR11662417 | Pre-XDR-TB | lineage2.1 | None | ERR6866872 | Other | lineage4.1.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None |
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