EBG00000313325 - n.1206T>C
Drug resistance types
104 Sensitive
93 RR-TB
13 HR-TB
24 MDR-TB
5 Pre-XDR-TB
2 XDR-TB
90 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 3 |
| lineage4.3.3 | 4 |
| lineage2.2.1 | 29 |
| lineage2.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4 | 4 |
| lineage3 | 8 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.9 | 207 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.4.2 | 1 |
| lineage5.1.3 | 1 |
| lineage4.2.2.2 | 3 |
| lineage4.1.2 | 4 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.1.2.1 | 7 |
| lineage4.8 | 6 |
| 2 | |
| lineage4.3.4.2 | 3 |
| lineage4.6.1.1 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.6 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.6.3 | 1 |
| lineage6.3.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.1.1 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.6.1 | 1 |
| La1.8.1 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.9.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 1 |
| La1.8.2 | 2 |
| lineage4.7 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 331 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11348155 | Sensitive | lineage1.1.2 | None | SRR11348198 | Sensitive | lineage1.1.2 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | SRR11349180 | MDR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR12006639 | Sensitive | lineage1.2.1.2.1 | None | SRR12142324 | Sensitive | lineage4.5 | None | SRR12142410 | MDR-TB | lineage4.4.2 | None | SRR13861159 | Other | lineage4.9 | None | SRR13861145 | Sensitive | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861148 | Sensitive | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861177 | Sensitive | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861171 | Sensitive | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861187 | Other | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861196 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861275 | Sensitive | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861315 | Sensitive | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861311 | Other | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861353 | Other | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861344 | RR-TB | lineage4.9 | None | SRR13861352 | Other | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861359 | Sensitive | lineage4.9 | None | SRR13861360 | HR-TB | lineage4.9 | None | SRR13861365 | Other | lineage4.9 | None | SRR13861356 | Other | lineage4.9 | None | SRR13861364 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861402 | Other | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861425 | Sensitive | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861441 | Sensitive | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861456 | Sensitive | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861475 | RR-TB | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861469 | Sensitive | lineage4.9 | None | SRR13861472 | Other | lineage4.9 | None | SRR13861474 | Sensitive | lineage4.9 | None | SRR13861492 | Sensitive | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861508 | RR-TB | lineage4.9 | None | SRR13861529 | Sensitive | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861542 | RR-TB | lineage4.9 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861544 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861560 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861576 | Other | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861588 | RR-TB | lineage4.9 | None | SRR13861605 | Sensitive | lineage4.9 | None | SRR13861601 | Sensitive | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13861599 | RR-TB | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861672 | Sensitive | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861707 | Other | lineage4.9 | None | SRR13861711 | Other | lineage4.9 | None | SRR13861713 | RR-TB | lineage4.9 | None | SRR13861703 | RR-TB | lineage4.9 | None | SRR13861719 | Sensitive | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861730 | Sensitive | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR14782555 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR19303791 | Sensitive | lineage5.1.3 | None | SRR15316071 | Sensitive | lineage2.2.1 | None | SRR15316544 | Sensitive | lineage2.2.1 | None | SRR18213966 | Sensitive | lineage4.2.2.2 | None | SRR15316578 | Sensitive | lineage2.2.1 | None | SRR21677891 | Other | lineage4.1.2 | None | SRR19303931 | Other | lineage2.2.1 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR4816991 | Sensitive | lineage4.9 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR2027277 | Other | lineage4.8 | None | ERR1034791 | RR-TB | None | ERR1193643 | Sensitive | lineage4.3.4.2 | None | ERR1199076 | Sensitive | lineage4.6.1.1 | None | ERR4815823 | HR-TB | lineage4.6.2.2 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR2510756 | HR-TB | lineage2.2.1 | None | ERR2510736 | Other | lineage4.1.2.1 | None | ERR2510746 | Other | lineage2.2.1 | None | ERR228144 | Sensitive | lineage4.2.2.2 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2510807 | Other | lineage4.6 | None | ERR2513440 | Other | lineage4.1.1.3 | None | ERR2510820 | Other | lineage4.8 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR4818190 | Other | lineage4.8 | None | SRR6280286 | Sensitive | lineage2.2.1 | None | ERR1193644 | HR-TB | lineage4.3.3 | None | ERR245790 | Sensitive | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2513297 | Sensitive | lineage3.1.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR4820829 | Other | lineage4.8 | None | ERR4821817 | Other | lineage4.9 | None | SRR5341346 | Sensitive | lineage3 | None | ERR4821775 | Other | lineage4 | None | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR4821054 | Other | lineage3 | None | ERR1199082 | Sensitive | lineage4.6.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6046106 | Sensitive | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4822114 | Other | lineage4.1.2.1 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6045162 | Sensitive | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | ERR4830493 | MDR-TB | lineage2.2.1 | None | ERR4829238 | Sensitive | lineage3 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4829196 | Other | lineage4.1.2 | None | ERR4829264 | Sensitive | lineage4.8 | None | ERR4828749 | Sensitive | lineage2.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None | ERR4828772 | HR-TB | lineage2.2.1 | None | ERR4828764 | Sensitive | lineage2.2.1 | None | ERR4828810 | Pre-XDR-TB | lineage2.2.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR7131035 | Sensitive | lineage4.8 | None | ERR5311095 | Other | La1.8.1 | None | ERR5162127 | Sensitive | lineage4.9 | None | ERR5162126 | Sensitive | lineage4.9 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131059 | Other | lineage4.1.2 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR126611 | Sensitive | lineage4.9.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR3283035 | Sensitive | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3439235 | Sensitive | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3468789 | Sensitive | lineage4.9 | None | ERR3439294 | Other | lineage4.9 | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR4024562 | Sensitive | lineage4.1.1.3 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR405191 | Other | lineage4.9 | None | ERR405201 | Sensitive | lineage4.3.4.2.1 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR4187607 | Other | La1.8.1 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR4188158 | Other | lineage4.9 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR5979789 | Other | lineage4.9 | None | ERR5979784 | Sensitive | lineage4.9 | None | ERR5979787 | Other | lineage4.9 | None | ERR5979791 | Sensitive | lineage4.9 | None | ERR5979815 | Sensitive | lineage4.9 | None | ERR5979808 | Sensitive | lineage4.9 | None | ERR5979809 | Sensitive | lineage4.9 | None | ERR5979801 | Sensitive | lineage4.9 | None | ERR5979805 | Sensitive | lineage4.9 | None | ERR5979819 | Sensitive | lineage4.9 | None | ERR5979804 | Sensitive | lineage4.9 | None | ERR5979810 | Sensitive | lineage4.9 | None | ERR5979825 | Sensitive | lineage4.9 | None | ERR5979817 | Sensitive | lineage4.9 | None | ERR5979828 | Sensitive | lineage4.9 | None | ERR5979822 | Sensitive | lineage4.9 | None | ERR6140667 | Other | La1.8.2 | None | ERR6197034 | Other | lineage4.9 | None | ERR6149874 | Other | La1.8.2 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197031 | Other | lineage4.7 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6359073 | Sensitive | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6326065 | MDR-TB | lineage4.3.4.2 | None | ERR6197039 | MDR-TB | lineage4.3.4.2 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR6866046 | Sensitive | lineage4.1.1.3 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9891984 | Sensitive | lineage6.3.1 | None | SRR10305656 | Other | lineage2.2.1 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048998 | HR-TB | lineage2.2.1 | None |
|---|
