EBG00000313339 - n.1263G>C
Drug resistance types
85 Sensitive
1 RR-TB
11 HR-TB
11 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
116 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 115 |
| lineage4.6.1.1 | 4 |
| lineage1.2.1.2.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4 | 1 |
| La1.2.BCG;lineage4.9 | 5 |
| lineage4.7 | 3 |
| lineage4.2.2.2 | 3 |
| lineage4.3.3 | 6 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.2.1 | 6 |
| lineage4.4.1.1 | 2 |
| lineage4.8 | 7 |
| lineage4.6.1.2 | 3 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1 | 17 |
| lineage4.3.2.1 | 6 |
| lineage4.8.1 | 1 |
| La1.8.1 | 2 |
| lineage4.1.2 | 3 |
| lineage2.2.1.1 | 3 |
| lineage1.2.2.1 | 3 |
| lineage2.2.2 | 2 |
| lineage3.1.1 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage4.4.1.1;lineage4.6.1.2 | 1 |
| lineage5 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.6 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| La1.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage2.2.2;lineage4 | 2 |
| lineage4.1.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.2.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 231 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1202706 | Other | lineage4.9 | None | SRR1202714 | Sensitive | lineage4.9 | None | SRR7504779 | Sensitive | lineage4.9 | None | SRR1183523 | Other | lineage4.9 | None | SRR1173717 | MDR-TB | lineage4.6.1.1 | None | SRR1183362 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR1181223 | Other | lineage4.9 | None | SRR1180686 | Other | lineage4.9 | None | SRR1183678 | Other | lineage4.9 | None | SRR1183327 | Other | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | SRR7504781 | Sensitive | lineage4.9 | None | ERR2179816 | Sensitive | lineage4 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR6397770 | Other | lineage4.7 | None | SRR1182882 | Other | lineage4.9 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1173025 | Other | lineage4.9 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR1182990 | Other | lineage4.9 | None | ERR736816 | Other | lineage4.9 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | SRR1181299 | Other | lineage4.9 | None | ERR2229358 | Other | lineage4.8 | None | SRR1180668 | Other | lineage4.9 | None | SRR1183098 | Other | lineage4.9 | None | ERR1034692 | Other | lineage1.2.1.2.1 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | SRR1183341 | Other | lineage4.9 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR1202708 | Other | lineage4.9 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR1172808 | Other | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR987733 | Other | lineage4.6.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183192 | Other | lineage4.9 | None | SRR7504776 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR1183402 | Other | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR1183277 | Other | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR1183068 | Other | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1183185 | Other | lineage4.9 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | SRR1183168 | Other | lineage4.9 | None | SRR1183237 | Other | lineage4.9 | None | ERR6362858 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181147 | Other | lineage4.9 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | SRR6389899 | Other | lineage4.1.2 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR1723567 | MDR-TB | lineage2.2.1 | cn | ERR553231 | Other | lineage4.1.2.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | SRR1196582 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR1182883 | Other | lineage4.9 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | SRR1180743 | Other | lineage4.9 | None | SRR1182908 | Other | lineage4.9 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180113 | Other | lineage4.9 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR7645808 | HR-TB | lineage4.2.1;lineage4.8 | None | SRR1202702 | Other | lineage4.9 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1182880 | Other | lineage4.9 | None | SRR1062873 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None | SRR1183315 | Other | lineage4.9 | None | SRR1182878 | Other | lineage4.9 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR1182876 | Other | lineage4.9 | None | SRR1183175 | Other | lineage4.9 | None | ERR036215 | Other | lineage4.8 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR7504775 | Sensitive | lineage4.9 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | ERR439982 | Sensitive | lineage5 | None | SRR1183193 | Other | lineage4.9 | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR6153015 | Sensitive | lineage2.2.1 | None | SRR1183538 | Other | lineage4.9 | None | SRR1183290 | Other | lineage4.9 | None | SRR6152886 | HR-TB | lineage3 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR6397441 | Other | lineage4.5 | None | SRR1183472 | Other | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR1208377 | Other | lineage4.9 | None | SRR1180125 | Other | lineage4.9 | None | SRR1183354 | Other | lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR1183520 | Other | lineage4.9 | None | SRR10993936 | Other | La1.6 | None | SRR1180495 | Other | lineage4.9 | None | SRR1183121 | Other | lineage4.9 | None | SRR13591410 | Other | lineage4.9 | None | SRR7504782 | Sensitive | lineage4.9 | None | SRR7504786 | Sensitive | lineage4.9 | None | SRR1183306 | Other | lineage4.9 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1183190 | Other | lineage4.9 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | ERR2229033 | Other | lineage4.8 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1182927 | Other | lineage4.9 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | SRR1208721 | Other | lineage4.9 | None | ERR1034765 | HR-TB | lineage4.3.3 | None | ERR7911622 | Pre-XDR-TB | lineage2.2.2 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR1181224 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR1202728 | Other | lineage4.9 | None | SRR1202656 | Sensitive | lineage4.9 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR1182925 | Other | lineage4.9 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | SRR7504772 | Sensitive | lineage4.9 | None | ERR6201802 | Other | La1.2 | None | ERR176470 | Other | lineage4.3.4.1 | mw | SRR1173384 | Other | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR1180111 | Other | lineage4.9 | None | SRR2101681 | Sensitive | lineage4.8 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1181193 | Other | lineage4.9 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR1183322 | Other | lineage4.9 | None | SRR1183050 | Other | lineage4.9 | None | SRR1183224 | Other | lineage4.9 | None | SRR1182965 | Other | lineage4.9 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR1183548 | Other | lineage4.9 | None | SRR7645834 | Other | lineage2.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR2228859 | Other | lineage4.8 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR1183080 | Other | lineage4.9 | None | SRR1181422 | Other | lineage4.9 | None | ERR473337 | Other | lineage4.1.2 | None | SRR1180213 | Other | lineage4.9 | None | SRR1183128 | Other | lineage4.9 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR1202547 | Sensitive | lineage4.9 | None | SRR1180455 | Other | lineage4.9 | None | SRR1183170 | Other | lineage4.9 | None | SRR1049031 | Sensitive | lineage4.9 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | SRR1180048 | Other | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR2228888 | Other | lineage4.8 | None | SRR7504773 | Sensitive | lineage4.9 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | ERR560449 | HR-TB | La1.2.BCG;lineage4.9 | None | ERR163952 | Sensitive | lineage1.1.3.2 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR7504783 | Sensitive | lineage4.9 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR12882631 | Other | lineage3.1.2.1 | None | ERR502492 | Sensitive | lineage4.9 | None | SRR6153036 | Other | lineage1.2.1.2.1;lineage4.9 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR1183358 | Other | lineage4.9 | None | SRR1183430 | Other | lineage4.9 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR1183321 | Other | lineage4.9 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR1049030 | Sensitive | lineage4.9 | None | SRR1182958 | Other | lineage4.9 | None | SRR1181199 | Other | lineage4.9 | None | SRR7504788 | Sensitive | lineage4.9 | None | ERR6198389 | Other | La1.2 | None | SRR1180599 | Other | lineage4.9 | None |
|---|
