EBG00000313339 - n.1263G>C


Drug resistance types
85 Sensitive 1 RR-TB 11 HR-TB 11 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 116 Other
lineage Counts
lineage Count
lineage4.9 115
lineage4.6.1.1 4
lineage1.2.1.2.1 3
lineage3.1.2.2 1
lineage4 1
La1.2.BCG;lineage4.9 5
lineage4.7 3
lineage4.2.2.2 3
lineage4.3.3 6
lineage4.6.2.2 2
lineage4.3.4.2.1 6
lineage4.4.1.1 2
lineage4.8 7
lineage4.6.1.2 3
lineage4.3.4.2 1
lineage2.2.1 17
lineage4.3.2.1 6
lineage4.8.1 1
La1.8.1 2
lineage4.1.2 3
lineage2.2.1.1 3
lineage1.2.2.1 3
lineage2.2.2 2
lineage3.1.1 2
lineage4.3.4.1 3
lineage4.1.2.1 3
lineage4.1.1 1
lineage4.2.1.1 2
lineage4.2.1;lineage4.8 1
lineage4.4.1.1;lineage4.6.1.2 1
lineage5 1
lineage1.1.1.1 1
lineage3 1
lineage4.5 1
lineage2.2.1;lineage4 1
La1.6 1
lineage4.1.1.3;lineage4.9 1
La1.2 2
lineage4.1.1.3 1
lineage4.3.2.1;lineage4.9 1
lineage2.2.2;lineage4 2
lineage4.1.1.1 1
lineage1.1.3.2 1
lineage3.1.2.1 1
lineage1.2.1.2.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.1.4 1
spoligotype Counts
spoligotype Count
None 231
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1202706 Other lineage4.9 None
SRR1202714 Sensitive lineage4.9 None
SRR7504779 Sensitive lineage4.9 None
SRR1183523 Other lineage4.9 None
SRR1173717 MDR-TB lineage4.6.1.1 None
SRR1183362 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR1181223 Other lineage4.9 None
SRR1180686 Other lineage4.9 None
SRR1183678 Other lineage4.9 None
SRR1183327 Other lineage4.9 None
SRR6982076 Sensitive lineage4.9 None
SRR6397396 HR-TB lineage1.2.1.2.1 None
ERR072033 Sensitive lineage3.1.2.2 None
SRR7504781 Sensitive lineage4.9 None
ERR2179816 Sensitive lineage4 None
ERR560441 Sensitive La1.2.BCG;lineage4.9 None
SRR6397770 Other lineage4.7 None
SRR1182882 Other lineage4.9 None
SRR1049569 Sensitive lineage4.2.2.2 None
SRR1172816 MDR-TB lineage4.3.3 None
SRR1173025 Other lineage4.9 None
SAMN02585982 MDR-TB lineage4.3.3 None
ERR473298 Sensitive lineage4.6.2.2 None
SRR6397575 Other lineage4.3.4.2.1 None
SRR1182990 Other lineage4.9 None
ERR736816 Other lineage4.9 None
SRR6982405 Sensitive lineage4.4.1.1 None
SRR1181299 Other lineage4.9 None
ERR2229358 Other lineage4.8 None
SRR1180668 Other lineage4.9 None
SRR1183098 Other lineage4.9 None
ERR1034692 Other lineage1.2.1.2.1 None
ERR987757 MDR-TB lineage4.6.1.2 None
ERR987695 HR-TB lineage4.3.4.2 None
SRR1183341 Other lineage4.9 None
SRR10614047 Sensitive lineage4.9 None
SRR1183339 Other lineage4.9 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR502485 Sensitive lineage4.9 None
SRR1202708 Other lineage4.9 None
SRR6855917 Sensitive lineage4.8 None
SRR6982104 Sensitive lineage2.2.1 None
SRR1172808 Other lineage4.9 None
SAMN02350456 Sensitive lineage4.3.2.1 None
ERR5865343 MDR-TB lineage2.2.1 None
ERR987733 Other lineage4.6.1.1 None
SRR1181368 Other lineage4.9 None
SRR1183192 Other lineage4.9 None
SRR7504776 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
SRR1183402 Other lineage4.9 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR1183277 Other lineage4.9 None
SRR1049568 Sensitive lineage4.2.2.2 None
SRR6045909 Other lineage4.8.1 None
SRR1791940 Other La1.8.1 None
SRR1183068 Other lineage4.9 None
SRR6982385 Sensitive lineage4.1.2 None
ERR502483 Sensitive lineage4.9 None
SRR1062860 Sensitive lineage2.2.1.1 None
SRR1183185 Other lineage4.9 None
SRR7444074 Sensitive lineage4.9 None
SRR1011492 Sensitive lineage1.2.2.1 None
SRR1183168 Other lineage4.9 None
SRR1183237 Other lineage4.9 None
ERR6362858 Pre-XDR-TB lineage2.2.2 None
SRR1181147 Other lineage4.9 None
SRR6982328 Sensitive lineage3.1.1 None
SRR1019130 Sensitive lineage4.3.2.1 None
SRR6389899 Other lineage4.1.2 None
SRR2101689 Sensitive lineage4.3.4.1 None
SRR1723567 MDR-TB lineage2.2.1 cn
ERR553231 Other lineage4.1.2.1 None
SRR6982014 Sensitive lineage4.1.1 None
SRR1196582 Other lineage4.9 None
ERR176741 Other lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR1182883 Other lineage4.9 None
ERR176771 Sensitive lineage4.3.4.2.1 None
SRR1180743 Other lineage4.9 None
SRR1182908 Other lineage4.9 None
SRR11972407 Pre-XDR-TB lineage2.2.1 None
SRR1180113 Other lineage4.9 None
SRR7645827 Other lineage4.2.1.1 None
SRR1173706 Other lineage4.9 None
SRR7645808 HR-TB lineage4.2.1;lineage4.8 None
SRR1202702 Other lineage4.9 None
SRR1062863 Sensitive lineage1.2.2.1 None
SRR1182880 Other lineage4.9 None
SRR1062873 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
SRR1183315 Other lineage4.9 None
SRR1182878 Other lineage4.9 None
ERR987704 HR-TB lineage4.6.1.2 None
SRR6855915 Sensitive lineage4.9 None
SRR6855721 Sensitive lineage4.3.2.1 None
ERR7801178 Other lineage4.3.4.2.1 None
ERR502493 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR1182876 Other lineage4.9 None
SRR1183175 Other lineage4.9 None
ERR036215 Other lineage4.8 None
SRR6982337 Sensitive lineage4.7 None
SRR7504775 Sensitive lineage4.9 None
SRR6397548 HR-TB lineage1.2.1.2.1 None
ERR439982 Sensitive lineage5 None
SRR1183193 Other lineage4.9 None
SRR6397771 Other lineage1.1.1.1 None
SRR8073606 Other La1.8.1 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR6153015 Sensitive lineage2.2.1 None
SRR1183538 Other lineage4.9 None
SRR1183290 Other lineage4.9 None
SRR6152886 HR-TB lineage3 None
SRR6855851 Other lineage4.3.4.2.1 None
SRR2101643 Other lineage2.2.1 None
SRR6397441 Other lineage4.5 None
SRR1183472 Other lineage4.9 None
SRR1184383 Other lineage4.9 None
SRR1208377 Other lineage4.9 None
SRR1180125 Other lineage4.9 None
SRR1183354 Other lineage4.9 None
ERR560443 Sensitive La1.2.BCG;lineage4.9 None
SRR6982448 Sensitive lineage2.2.1;lineage4 None
SRR1183520 Other lineage4.9 None
SRR10993936 Other La1.6 None
SRR1180495 Other lineage4.9 None
SRR1183121 Other lineage4.9 None
SRR13591410 Other lineage4.9 None
SRR7504782 Sensitive lineage4.9 None
SRR7504786 Sensitive lineage4.9 None
SRR1183306 Other lineage4.9 None
SRR6397727 Other lineage4.2.1.1 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1183190 Other lineage4.9 None
SRR6982362 Sensitive lineage4.3.2.1 None
SRR6152979 Other lineage4.7 None
SRR15723110 Sensitive lineage2.2.1 None
ERR037529 Other lineage4.3.4.2.1 None
SAMN02350450 Sensitive lineage1.2.2.1 None
SRR21676318 Sensitive lineage2.2.1 None
ERR2229033 Other lineage4.8 None
SRR1011489 Sensitive lineage2.2.1.1 None
SRR1182927 Other lineage4.9 None
ERR1199007 Sensitive lineage4.6.1.1 None
SRR1208721 Other lineage4.9 None
ERR1034765 HR-TB lineage4.3.3 None
ERR7911622 Pre-XDR-TB lineage2.2.2 None
SRR2101685 Sensitive lineage4.9 None
SRR1181224 Other lineage4.9 None
SRR1180252 Other lineage4.9 None
ERR3324331 MDR-TB lineage4.3.4.1 None
ERR560442 Sensitive La1.2.BCG;lineage4.9 None
SRR1202728 Other lineage4.9 None
SRR1202656 Sensitive lineage4.9 None
ERR036194 Other lineage4.6.1.2 None
ERR502490 Sensitive lineage4.9 None
SRR1182925 Other lineage4.9 None
SRR12882768 RR-TB lineage3.1.1 None
SRR7504772 Sensitive lineage4.9 None
ERR6201802 Other La1.2 None
ERR176470 Other lineage4.3.4.1 mw
SRR1173384 Other lineage4.9 None
SRR6982414 Sensitive lineage4.9 None
SRR1180111 Other lineage4.9 None
SRR2101681 Sensitive lineage4.8 None
SAMN02380985 Sensitive lineage4.2.2.2 None
SRR21675637 Sensitive lineage4.3.3 None
ERR7801177 Other lineage4.3.4.2.1 None
SAMN02567676 MDR-TB lineage4.6.1.1 None
SRR10869203 Pre-XDR-TB lineage4.1.1.3 None
SRR1181193 Other lineage4.9 None
SRR2101803 Sensitive lineage4.3.3 None
ERR3324362 HR-TB lineage4.1.2.1 None
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
SRR1183322 Other lineage4.9 None
SRR1183050 Other lineage4.9 None
SRR1183224 Other lineage4.9 None
SRR1182965 Other lineage4.9 None
SRR1013637 Sensitive lineage2.2.2;lineage4 None
ERR502484 Sensitive lineage4.9 None
SRR1183548 Other lineage4.9 None
SRR7645834 Other lineage2.2.1 None
ERR037234 Sensitive lineage4.9 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR2228859 Other lineage4.8 None
ERR560440 Sensitive La1.2.BCG;lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR1013636 Sensitive lineage2.2.2;lineage4 None
SRR2101774 Sensitive lineage2.2.1 None
SRR1183080 Other lineage4.9 None
SRR1181422 Other lineage4.9 None
ERR473337 Other lineage4.1.2 None
SRR1180213 Other lineage4.9 None
SRR1183128 Other lineage4.9 None
SRR6982077 Sensitive lineage4.3.2.1 None
SRR1202547 Sensitive lineage4.9 None
SRR1180455 Other lineage4.9 None
SRR1183170 Other lineage4.9 None
SRR1049031 Sensitive lineage4.9 None
SRR2101617 Sensitive lineage4.1.1.1 None
SRR6982102 Sensitive lineage2.2.1 None
SRR6480593 Sensitive lineage4.1.2.1 None
SRR1180048 Other lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR2228888 Other lineage4.8 None
SRR7504773 Sensitive lineage4.9 None
ERR502472 Sensitive lineage4.6.2.2 None
ERR560449 HR-TB La1.2.BCG;lineage4.9 None
ERR163952 Sensitive lineage1.1.3.2 None
ERR2600577 Pre-XDR-TB lineage2.2.1 None
SRR7504783 Sensitive lineage4.9 None
SRR21714038 Sensitive lineage4.3.3 None
SRR12882631 Other lineage3.1.2.1 None
ERR502492 Sensitive lineage4.9 None
SRR6153036 Other lineage1.2.1.2.1;lineage4.9 None
SRR3105736 Sensitive lineage1.2.2.2 None
ERR502497 Sensitive lineage4.9 None
SRR1183358 Other lineage4.9 None
SRR1183430 Other lineage4.9 None
ERR2600576 Pre-XDR-TB lineage2.2.1 None
ERR3324351 HR-TB lineage4.1.4 None
SRR1183321 Other lineage4.9 None
SAMN02350447 Sensitive lineage2.2.1.1 None
SRR1049030 Sensitive lineage4.9 None
SRR1182958 Other lineage4.9 None
SRR1181199 Other lineage4.9 None
SRR7504788 Sensitive lineage4.9 None
ERR6198389 Other La1.2 None
SRR1180599 Other lineage4.9 None