EBG00000313325 - n.1264T>C
Drug resistance types
61 Sensitive
10 RR-TB
7 HR-TB
11 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 9 |
| La1.8.1 | 9 |
| lineage4.9 | 21 |
| lineage4.3.2.1 | 12 |
| lineage2.2.1 | 18 |
| La1.2 | 1 |
| lineage4.1.1 | 7 |
| lineage3.1.2 | 2 |
| La1.7.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3.4.2.1 | 7 |
| lineage4.4.1.1 | 8 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage1.1.3.2 | 3 |
| lineage4.8 | 7 |
| lineage4.1 | 2 |
| 4 | |
| lineage9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.7 | 4 |
| lineage2.2.2 | 5 |
| lineage4 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2.1 | 10 |
| lineage4.6.2.2 | 6 |
| lineage4.1.1.3 | 5 |
| lineage1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage1.2.2 | 1 |
| lineage4.3.3 | 5 |
| lineage2.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.4 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9;La1.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 174 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR17856664 | Sensitive | lineage3 | None | SRR10482944 | Other | La1.8.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR11871413 | Pre-XDR-TB | lineage2.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR16058676 | MDR-TB | lineage2.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18391772 | Other | La1.7.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101651 | Sensitive | lineage4.3.2.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR2101661 | Sensitive | lineage4.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR176820 | Sensitive | lineage4.3.4.2.1 | mw | ERR4815310 | Other | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR181315 | MDR-TB | lineage9 | so | ERR4814623 | Other | lineage4.8 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814656 | Other | None | ERR4814783 | Other | lineage4.7 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR4815550 | Other | lineage4 | None | ERR4815040 | Other | lineage4.2.2.2 | None | ERR4816101 | Other | lineage4.1.2.1 | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR4816103 | Sensitive | lineage3 | gb | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816450 | Sensitive | lineage4.1.1.3 | gb | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR4817160 | Sensitive | lineage1.1.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816756 | RR-TB | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4817306 | Other | lineage3 | gb | ERR2513589 | Other | lineage3.1.3 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR2513398 | Other | lineage4.2.1 | gb | ERR2513440 | Other | lineage4.1.1.3 | None | ERR4818384 | Other | lineage4.8 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR4818188 | Other | lineage4.1.2.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4820256 | Other | lineage2.2.1 | None | ERR2513297 | Sensitive | lineage3.1.2 | None | ERR2513652 | Sensitive | lineage4.1.1.3.1 | gb | ERR2515491 | Sensitive | lineage2.2.1 | None | ERR4820730 | Other | lineage4.8 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820748 | Other | lineage3 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR2514522 | Other | lineage3 | gb | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820884 | Other | lineage4.1.1 | gb | ERR4819734 | RR-TB | lineage3 | gb | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR4820801 | Other | lineage1.2.2 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR2515148 | Sensitive | lineage4.3.3 | None | ERR4820107 | RR-TB | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045295 | Other | lineage4.7 | None | ERR4822043 | Other | lineage4.1.1 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821477 | Other | lineage4.8 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6046517 | Other | lineage4.8 | None | ERR4828391 | Sensitive | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046291 | Other | lineage3 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6856087 | Sensitive | lineage4 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982170 | Sensitive | lineage4.1 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6981997 | Sensitive | lineage4.9 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6855887 | Sensitive | lineage2.2.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982033 | Sensitive | lineage2.2.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982394 | Sensitive | lineage4.3.2.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | ERR5162133 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR5162118 | Other | La1.8.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR323068 | Sensitive | lineage4.9 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10796594 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR4188010 | Other | La1.8.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4188253 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4627392 | Other | La1.8.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR9125473 | MDR-TB | lineage2.2.1 | None |
|---|
