EBG00000313325 - n.1091C>T
Drug resistance types
95 Sensitive
95 RR-TB
9 HR-TB
20 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 7 |
| lineage4.9 | 219 |
| lineage2.2.1 | 9 |
| lineage4;lineage3.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage3.1.1 | 1 |
| lineage4 | 3 |
| La1.3 | 1 |
| La1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2 | 3 |
| lineage6.3.1 | 1 |
| lineage4.3.3 | 5 |
| lineage4.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.8 | 5 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage1.2.2 | 1 |
| 2 | |
| lineage4.5 | 1 |
| La1.8.1 | 1 |
| lineage4.6.1.1 | 6 |
| lineage4.4.1.1 | 4 |
| lineage1.1.3.2 | 1 |
| lineage6 | 1 |
| lineage3 | 2 |
| lineage4.6 | 2 |
| lineage4.6.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 296 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR405194 | Sensitive | lineage4.1.2.1 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR405201 | Sensitive | lineage4.3.4.2.1 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR5979787 | Other | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4772206 | Other | La1.2 | None | ERR5979791 | Sensitive | lineage4.9 | None | ERR5979789 | Other | lineage4.9 | None | ERR4810941 | MDR-TB | lineage2.2.1 | None | ERR5979784 | Sensitive | lineage4.9 | None | ERR5979802 | Sensitive | lineage4.9 | None | ERR5979808 | Sensitive | lineage4.9 | None | ERR5979805 | Sensitive | lineage4.9 | None | ERR5979799 | Sensitive | lineage4.9 | None | ERR5979801 | Sensitive | lineage4.9 | None | ERR5979809 | Sensitive | lineage4.9 | None | ERR5979815 | Sensitive | lineage4.9 | None | ERR5979817 | Sensitive | lineage4.9 | None | ERR5979826 | Sensitive | lineage4.9 | None | ERR5979822 | Sensitive | lineage4.9 | None | ERR5979819 | Sensitive | lineage4.9 | None | ERR5979828 | Sensitive | lineage4.9 | None | ERR5979825 | Sensitive | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197031 | Other | lineage4.7 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197039 | MDR-TB | lineage4.3.4.2 | None | ERR6197036 | Other | lineage4 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6359073 | Sensitive | lineage4.9 | None | ERR6326065 | MDR-TB | lineage4.3.4.2 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR9891984 | Sensitive | lineage6.3.1 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | SRR1002681 | HR-TB | lineage4.1 | None | SRR11349141 | MDR-TB | lineage4.1.1.3 | None | SRR10315475 | MDR-TB | lineage4.8 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR12199457 | Sensitive | lineage4.9;lineage1.1 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR1180451 | Sensitive | lineage1.2.2 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861145 | Sensitive | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR12199478 | Other | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861159 | Other | lineage4.9 | None | SRR13861148 | Sensitive | lineage4.9 | None | SRR13861155 | Sensitive | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861171 | Sensitive | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861165 | HR-TB | lineage4.9 | None | SRR13861177 | Sensitive | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861187 | Other | lineage4.9 | None | SRR13861196 | RR-TB | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861207 | Other | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861275 | Sensitive | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861278 | Other | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861315 | Sensitive | lineage4.9 | None | SRR13861311 | Other | lineage4.9 | None | SRR13861309 | HR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861344 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861353 | Other | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861356 | Other | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861359 | Sensitive | lineage4.9 | None | SRR13861364 | Other | lineage4.9 | None | SRR13861360 | HR-TB | lineage4.9 | None | SRR13861365 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861402 | Other | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861409 | HR-TB | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861442 | Other | lineage4.9 | None | SRR13861425 | Sensitive | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861429 | Other | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861441 | Sensitive | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861444 | Sensitive | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861456 | Sensitive | lineage4.9 | None | SRR13861472 | Other | lineage4.9 | None | SRR13861469 | Sensitive | lineage4.9 | None | SRR13861480 | Other | lineage4.9 | None | SRR13861474 | Sensitive | lineage4.9 | None | SRR13861475 | RR-TB | lineage4.9 | None | SRR13861496 | Other | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861492 | Sensitive | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861508 | RR-TB | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861517 | RR-TB | lineage4.9 | None | SRR13861523 | Other | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861529 | Sensitive | lineage4.9 | None | SRR13861544 | Other | lineage4.9 | None | SRR13861542 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861560 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861565 | RR-TB | lineage4.9 | None | SRR13861564 | Sensitive | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861580 | Other | lineage4.9 | None | SRR13861576 | Other | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861584 | Other | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861588 | RR-TB | lineage4.9 | None | SRR13861599 | RR-TB | lineage4.9 | None | SRR13861615 | Sensitive | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13861601 | Sensitive | lineage4.9 | None | SRR13861605 | Sensitive | lineage4.9 | None | SRR13861672 | Sensitive | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861650 | Sensitive | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861669 | Other | lineage4.9 | None | SRR13861676 | Sensitive | lineage4.9 | None | SRR13861682 | Other | lineage4.9 | None | SRR13861713 | RR-TB | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861707 | Other | lineage4.9 | None | SRR13861711 | Other | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861703 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861719 | Sensitive | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861730 | Sensitive | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR14179701 | Sensitive | lineage4.1.2.1 | None | SRR18002951 | Other | lineage4.5 | None | SRR15315871 | Sensitive | lineage4.9 | None | ERR1815548 | Other | La1.8.1 | None | ERR1199090 | Sensitive | lineage4.6.1.1 | ug | ERR464760 | Sensitive | lineage4.4.1.1 | ch | ERR4814573 | Other | lineage1.1.3.2 | None | ERR4815830 | Sensitive | lineage6 | None | ERR4817076 | Sensitive | lineage3 | None | ERR2510807 | Other | lineage4.6 | None | SRR3675589 | Sensitive | lineage4 | None | ERR1034791 | RR-TB | None | ERR1193643 | Sensitive | lineage4.3.4.2 | None | ERR1199076 | Sensitive | lineage4.6.1.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR1199081 | Sensitive | lineage4.6.1.1 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR4818575 | Sensitive | lineage4.1.2.1 | gb | ERR1193644 | HR-TB | lineage4.3.3 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR464762 | Sensitive | lineage4.4.1.1 | ch | ERR4821122 | Sensitive | lineage4.8 | gb | ERR1193653 | Sensitive | lineage4.3.4.2.1 | ug | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR1873459 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR1199088 | Sensitive | lineage4.6.1.1 | ug | ERR4820475 | Sensitive | lineage4.9 | None | ERR1199073 | Sensitive | lineage4.6.1.1 | ug | ERR1199077 | Sensitive | lineage4.6.1 | ug | ERR4820858 | Sensitive | lineage4.2.2.2 | None | ERR1199082 | Sensitive | lineage4.6.1.1 | None | ERR4830525 | MDR-TB | lineage4.4.1.1.1 | za | ERR1193651 | Sensitive | lineage4.3.3 | cd | ERR2652991 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR2747601 | Sensitive | lineage4.9 | None | SRR6045764 | Sensitive | lineage4.9 | None | SRR6046497 | Other | lineage4.9 | None | ERR464729 | MDR-TB | lineage4.4.1.1 | ch | ERR4829196 | Other | lineage4.1.2 | None | ERR4829264 | Sensitive | lineage4.8 | None | ERR4828811 | Other | lineage4.1.1 | None | SRR6257038 | HR-TB | lineage4.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | SRR7131071 | Sensitive | lineage4.1.2.1 | None | SRR7131035 | Sensitive | lineage4.8 | None | SRR7131053 | Other | lineage2.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR9971068 | MDR-TB | lineage4.4.1.1.1 | None | SRR7131277 | Sensitive | lineage4.8 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR3283035 | Sensitive | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None |
|---|
