EBG00000313325 - n.384C>T
Drug resistance types
87 Sensitive
3 RR-TB
10 HR-TB
14 MDR-TB
30 Pre-XDR-TB
2 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 5 |
| lineage4.4.1.1 | 6 |
| lineage4.3.4.2.1 | 5 |
| lineage1.2.2.2 | 4 |
| lineage4.2.2.2 | 4 |
| lineage4.1.1.3 | 4 |
| lineage3 | 8 |
| lineage1.2.2.1 | 2 |
| lineage4.3.2.1 | 4 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1 | 21 |
| lineage4.3.3 | 13 |
| lineage2.2.2 | 15 |
| lineage4.3.1.1 | 1 |
| lineage4.1.2.1 | 8 |
| La1.8.1 | 15 |
| 9 | |
| lineage4.8 | 3 |
| lineage1.1.3.3 | 1 |
| lineage4.9 | 26 |
| lineage4.6.2.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4 | 3 |
| lineage2.2 | 2 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.1 | 1 |
| lineage4.1.2;lineage3.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.4 | 1 |
| lineage4;La1 | 1 |
| La1 | 1 |
| La1.2 | 1 |
| La1.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.6 | 1 |
| lineage2 | 1 |
| La1.4 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 193 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR181864 | Sensitive | lineage3.1.1 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR5341460 | Other | lineage3 | None | ERR2513011 | Sensitive | lineage3 | gb | ERR245662 | Sensitive | lineage1.2.2.1 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | ERR4820332 | Other | lineage2.2.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR2514881 | HR-TB | lineage4.3.3 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR1873510 | Pre-XDR-TB | lineage2.2.2 | za | SRR6045805 | Other | lineage4.3.1.1 | None | ERR270771 | HR-TB | lineage3 | None | SRR6045584 | Sensitive | lineage4.1.2.1 | None | ERR2693240 | Other | La1.8.1 | None | SRR6045289 | Other | None | SRR6046189 | Other | lineage4.8 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR3724973 | Sensitive | lineage2.2.1 | pe | SRR6046463 | Other | lineage4.4.1.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502482 | Sensitive | lineage4.9 | None | SRR6046607 | Other | lineage3 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6046761 | Other | lineage3 | gb | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR6982115 | Sensitive | lineage4 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6832359 | Sensitive | lineage2.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6832659 | Other | lineage4.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6981912 | Sensitive | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982070 | RR-TB | None | ERR5087675 | Other | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR144557 | Sensitive | lineage4.8 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR144568 | Pre-XDR-TB | None | ERR3439443 | Other | La1.8.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3797043 | HR-TB | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187921 | Other | None | ERR4187666 | Other | La1.8.1 | None | ERR4187720 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4188396 | Sensitive | La1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4809194 | RR-TB | lineage2.2.1 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR9992725 | Pre-XDR-TB | lineage2.2.2 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9992612 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9992624 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9992711 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9992790 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992817 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992810 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993029 | MDR-TB | lineage4.3.3 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | ERR9993030 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993028 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9993119 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993145 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | ERR9993196 | XDR-TB | lineage2.2.2 | None | ERR9993167 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993227 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993215 | XDR-TB | lineage2.2.2 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993956 | Other | La1.6 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR124452 | HR-TB | lineage2 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199486 | Other | lineage2.2.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR16278292 | Other | La1.4 | None | SRR13628039 | Sensitive | lineage4.9 | None | SRR3105736 | Other | lineage1.2.2.2 | None | SRR18149443 | Sensitive | lineage3 | None | SRR19576436 | Sensitive | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21764250 | Other | lineage4.9 | None | ERR176771 | Sensitive | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR5758391 | Pre-XDR-TB | lineage2.2.2 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR1815548 | Other | La1.8.1 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | ERR3275866 | Other | lineage4.1.2.1 | nl | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None |
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