EBG00000313325 - n.533G>T
Drug resistance types
68 Sensitive
0 RR-TB
6 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
129 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 4 |
| lineage4.9 | 117 |
| lineage4.6.1.1 | 6 |
| lineage1.2.2.2 | 3 |
| lineage4.3.2 | 1 |
| lineage4.8 | 8 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.3.4.2.1 | 9 |
| lineage3.1.1 | 2 |
| La1.2 | 4 |
| lineage4.3.3 | 4 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| La1.2.BCG;lineage4.9 | 6 |
| lineage4.1.1 | 1 |
| lineage2.2.1 | 11 |
| lineage4.1.4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.8.1 | 2 |
| lineage1.1.2 | 1 |
| La1.8.2 | 2 |
| lineage2.2.2;lineage4 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3.2 | 1 |
| La1.8.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.1.2 | 1 |
| 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 209 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21728339 | Other | lineage3 | None | SRR1202562 | Sensitive | lineage4.9 | None | SRR1208221 | Other | lineage4.9 | None | SRR1208331 | Other | lineage4.9 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | SRR7504782 | Sensitive | lineage4.9 | None | SRR1202421 | Other | lineage4.9 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR1208712 | Other | lineage4.9 | None | SRR6982078 | Sensitive | lineage4.9 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR1140942 | Other | lineage2.2.1;lineage4 | None | SRR1208791 | Other | lineage4.9 | None | SRR1202599 | Other | lineage4.9 | None | SRR1208557 | Other | lineage4.9 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | SRR1209022 | Other | lineage4.9 | None | SRR1208530 | Other | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR1208612 | Other | lineage4.9 | None | ERR1199039 | Sensitive | lineage4.6.1.1 | None | SRR1202612 | Sensitive | lineage4.9 | None | ERR6201802 | Other | La1.2 | None | SRR1208947 | Other | lineage4.9 | None | SRR7070293 | Other | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | SRR1208508 | Other | lineage4.9 | None | SRR1202407 | Other | lineage4.9 | None | ERR560439 | Other | lineage4.9 | None | SRR6045289 | Other | lineage2.2;lineage4.9 | None | SRR1208368 | Other | lineage4.9 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | SRR1208565 | Other | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR1208677 | Other | lineage4.9 | None | SRR1202412 | Sensitive | lineage4.9 | None | SRR1019127 | Other | lineage4.9 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | ERR2446433 | Other | lineage4.1.2.1 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR1208353 | Other | lineage4.9 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR1202378 | Other | lineage4.9 | None | SRR1208543 | Other | lineage4.9 | None | ERR2229358 | Other | lineage4.8 | None | ERR6198389 | Other | La1.2 | None | ERR2228859 | Other | lineage4.8 | None | ERR560448 | Other | La1.2.BCG;lineage4.9 | None | SRR1202417 | Other | lineage4.9 | None | SRR1208337 | Other | lineage4.9 | None | ERR560449 | Other | La1.2.BCG;lineage4.9 | None | SRR5341417 | HR-TB | lineage3 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | ERR019572 | HR-TB | lineage2.2.1 | ru | SRR7131169 | Other | lineage4.1.2.1 | None | SRR1202627 | Other | lineage4.9 | None | SRR7504776 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR1202516 | Other | lineage4.9 | None | SRR1208173 | Sensitive | lineage4.9 | None | SRR1208775 | Other | lineage4.9 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | SRR1202450 | Sensitive | lineage4.9 | None | SRR1208784 | Other | lineage4.9 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | SRR1208487 | Other | lineage4.9 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR1723567 | MDR-TB | lineage2.2.1 | cn | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR6046117 | Other | lineage4.9 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7131185 | Other | lineage4.1.2.1 | None | SRR1208465 | Other | lineage4.9 | None | SRR1202410 | Other | lineage4.9 | None | SRR1209048 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR1202495 | Sensitive | lineage4.9 | None | SRR1208468 | Other | lineage4.9 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | SRR1208944 | Other | lineage4.9 | None | ERR2228888 | Other | lineage4.8 | None | ERR6140667 | Other | La1.8.2 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR1208900 | Other | lineage4.9 | None | SRR1208614 | Other | lineage4.9 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | SRR1208878 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1208744 | Other | lineage4.9 | None | SRR1208473 | Other | lineage4.9 | None | SRR1208798 | Other | lineage4.9 | None | SRR1202648 | Other | lineage4.9 | None | SRR1208836 | Other | lineage4.9 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1208283 | Sensitive | lineage4.9 | None | SRR1208586 | Other | lineage4.9 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | SRR1208958 | Other | lineage4.9 | None | SRR1209067 | Other | lineage4.9 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | SRR12199400 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR7504773 | Sensitive | lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR036215 | Other | lineage4.8 | None | SRR1208872 | Sensitive | lineage4.9 | None | SRR1208297 | Other | lineage4.9 | None | SRR1208395 | Other | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR1208327 | Sensitive | lineage4.9 | None | ERR6201798 | Other | La1.2 | None | SRR1208377 | Other | lineage4.9 | None | SRR1208532 | Other | lineage4.9 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR1208422 | Other | lineage4.9 | None | SRR5341429 | HR-TB | lineage3.1.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | SAMN02419540 | Other | lineage2.2.1 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR1208559 | Other | lineage4.9 | None | ERR6149874 | Other | La1.8.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR1202408 | Other | lineage4.9 | None | SRR1208683 | Other | lineage4.9 | None | SRR1202507 | Other | lineage4.9 | None | SRR7504786 | Sensitive | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR2229780 | Other | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | SRR1209004 | Sensitive | lineage4.9 | None | SRR1208439 | Sensitive | lineage4.9 | None | SRR1208768 | Other | lineage4.9 | None | SRR1208694 | Sensitive | lineage4.9 | None | SRR1202420 | Other | lineage4.9 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR1208914 | Other | lineage4.9 | None | SRR1208835 | Other | lineage4.9 | None | SRR1208752 | Other | lineage4.9 | None | SRR1202569 | Other | lineage4.9 | None | ERR1199021 | Other | lineage4.6.1.1 | None | SRR1202419 | Other | lineage4.9 | None | SRR1208334 | Other | lineage4.9 | None | SRR1202520 | Sensitive | lineage4.9 | None | SRR1202544 | Other | lineage4.9 | None | SRR1208230 | Other | lineage4.9 | None | SRR1208741 | Other | lineage4.9 | None | SRR1208979 | Other | lineage4.9 | None | SRR1208553 | Other | lineage4.9 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | SRR1208542 | Other | lineage4.9 | None | SRR1208808 | Other | lineage4.9 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR1208946 | Other | lineage4.9 | None | SRR1208906 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1208763 | Other | lineage4.9 | None | SRR6982139 | Sensitive | lineage4.9 | None | ERR1199064 | Sensitive | lineage4.6.1.1 | ug | SRR1202489 | Other | lineage4.9 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR1208731 | Sensitive | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR1208901 | Other | lineage4.9 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | SRR1208306 | Other | lineage4.9 | None | SRR6982175 | Sensitive | lineage1.1.3.2 | None | SRR7645834 | Other | lineage2.2.1 | None | ERR6201843 | Other | La1.2 | None | SRR1208925 | Other | lineage4.9 | None | SRR8073606 | Other | La1.8.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1238557 | Other | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | ERR560438 | Other | lineage4.9 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR1208238 | Other | lineage4.9 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR1208965 | Other | lineage4.9 | None | SRR1208486 | Other | lineage4.9 | None | SRR1208603 | Other | lineage4.9 | None | SRR1791940 | Other | La1.8.1 | None | SRR1208653 | Other | lineage4.9 | None | ERR1144989 | Sensitive | lineage4.8 | None | SRR1208765 | Sensitive | lineage4.9 | None | SRR1208657 | Sensitive | lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR036194 | Other | lineage4.6.1.2 | None | SRR7504779 | Sensitive | lineage4.9 | None | SRR1208421 | Other | lineage4.9 | None | SRR1202556 | Other | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR144568 | Sensitive | None | SRR6982196 | Sensitive | None |
|---|
