EBG00000313325 - n.533G>T


Drug resistance types
77 Sensitive 13 RR-TB 12 HR-TB 20 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 126 Other
lineage Counts
lineage Count
lineage4.9 58
La1.8.1 6
lineage3 12
lineage2.2.1 27
lineage4.8 14
lineage4.3.3 7
lineage1.1.3.2 3
lineage4.9.1 1
lineage4.1.1 5
lineage4.3.2.1 6
lineage2.2.1.1 2
lineage4.4.1.1.1 3
lineage4.4.1.1 5
lineage4.3.4.1 2
14
lineage4.6.1.1 7
lineage1.2.2.2 3
lineage4.6.2.2 2
lineage4.6.1 1
lineage4.1.2.1 7
lineage4 13
lineage4;lineage3 2
lineage3.1.2.1 1
lineage1.1.2 5
lineage4.4.1.2 1
lineage3.1.3 1
lineage3.1.2 1
lineage3.1.2.2 2
lineage4.1.2 3
lineage2.2.1;lineage1.1.1 1
lineage3.1.1 2
lineage1.2.1.2.1 1
lineage4.7 3
lineage4.2.1.1 1
lineage2.2 4
lineage4.1.1.3 1
lineage4.4 1
lineage4;lineage2.2.1 1
lineage4.3.4.2.1 8
lineage4;lineage2 1
lineage4.3.4.2 2
lineage4.6.1.2 2
lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 1
lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 1
lineage4.3.4.2.1;lineage1.1.3 1
lineage4.1.4 1
La1.8.2 3
La1.2 4
lineage2.2.2 1
lineage1.1.1 1
lineage4.9;lineage2.2 1
lineage4.9;lineage4.3.4.1 1
lineage4.9;lineage1.1 1
spoligotype Counts
spoligotype Count
None 258
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR17592370 Sensitive lineage4.9 None
SRR1791940 Other La1.8.1 None
SRR18213726 Other lineage3 None
SRR18002932 Pre-XDR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR19303796 Other lineage4.3.3 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101678 Sensitive lineage4.4.1.1.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101685 Sensitive lineage4.9 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR22424905 RR-TB lineage4.9 None
SRR21728339 Other lineage3 None
ERR176771 Sensitive None
ERR1198988 Sensitive lineage4.6.1.1 None
SAMN02419540 Other lineage2.2.1 None
ERR4814362 Other lineage4.8 None
SRR3105736 Other lineage1.2.2.2 None
SRR1723567 MDR-TB lineage2.2.1 cn
ERR2229033 Other lineage4.8 None
SRR3675388 Sensitive lineage3 gb
ERR4816129 HR-TB lineage4.6.2.2 gb
ERR1199039 Sensitive lineage4.6.1 None
ERR4816177 Other lineage4.1.2.1 None
ERR2229115 Other lineage4.8 None
ERR2228822 Other lineage4.9 None
ERR2229127 Sensitive lineage4.8 None
ERR1199021 Other lineage4.6.1.1 None
ERR2229780 Other lineage4.9 None
ERR2229336 Other lineage4.8 None
ERR2229358 Other lineage4.8 None
ERR2228874 Other lineage4 None
ERR2228859 RR-TB lineage4 None
ERR2228888 Other lineage4.8 None
ERR1199064 Other lineage4.6.1.1 ug
ERR1199007 Sensitive lineage4.6.1.1 None
ERR1199009 Sensitive lineage4.6.1.1 None
ERR1199001 Sensitive lineage4.6.1.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007155 HR-TB lineage4.1.2.1 None
SRR5007165 MDR-TB lineage3 None
SRR5341417 Pre-XDR-TB lineage3 None
SRR5007168 RR-TB lineage4.9 None
ERR2446433 Other lineage4.1.2.1 None
SRR5341375 Other lineage4.9 None
SRR5341300 Other lineage4 None
SRR5341429 HR-TB lineage3.1.2.1 None
SRR5341310 Other lineage1.1.2 None
SRR5341467 Other lineage4 None
SRR5341317 Pre-XDR-TB lineage3 None
SRR6045599 Other lineage4.8 None
SAMN02350456 Sensitive lineage4.3.2.1 None
SRR6046117 RR-TB lineage4.9 None
SRR6045616 Other lineage4.4.1.2 gb
SRR6045613 Other lineage3.1.3 None
SRR5818666 Other lineage3 None
SRR6045683 Other lineage3.1.2 None
SRR6045909 Other lineage4.8 None
SRR6044830 Other lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045036 Other lineage4;lineage3 None
SRR6045045 Other lineage2.2.1 None
SRR6045928 Other lineage4.9 None
SRR6044993 Other lineage3 None
SRR6046015 Other lineage4.9 None
SRR6045424 Other lineage1.1.2 None
SRR6045399 Other None
SRR6045289 Other None
SRR6045384 Other lineage4.1.2 None
ERR2843513 Other lineage2.2.1;lineage1.1.1 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046497 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046534 Other lineage1.1.2 None
SRR6046716 Other lineage3 gb
SRR6046739 Other lineage1.1.2 None
SRR6046275 Other lineage3.1.1 None
ERR2851371 Other lineage4.9 None
SRR6046541 Other lineage4.9 None
SRR6046607 Other lineage3 None
SRR6397441 Other lineage4 None
SRR6397396 HR-TB lineage1.2.1.2.1 None
SRR6397770 Other lineage4.7 None
SRR6152979 Other lineage4.7 None
SRR6397727 Other lineage4.2.1.1 None
SRR6397642 RR-TB None
SRR6153036 Other None
SRR6982078 Sensitive None
ERR502483 Sensitive lineage4.9 None
ERR502472 Other lineage4.6.2.2 None
ERR502482 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
SRR6982102 Other lineage2.2.1 None
ERR502497 Sensitive lineage4.9 None
SRR6856087 Sensitive lineage4 None
SRR6982414 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982140 Other lineage2.2 None
SRR6982115 Sensitive lineage4 None
SRR6982138 Sensitive lineage4 None
SRR6982139 Sensitive lineage4.9 None
SRR6896255 Sensitive lineage4.3.3 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982272 Sensitive lineage4.9 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6982196 Sensitive None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982178 Sensitive lineage2.2 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6982195 RR-TB lineage4.4 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6896539 MDR-TB lineage3 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982275 Other lineage2.2.1 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6982508 Sensitive lineage4.9 None
SRR6982337 Sensitive lineage4.7 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6855851 Sensitive lineage4.3.4.2.1 None
SRR6982510 Sensitive lineage4;lineage2 None
SRR6982362 Other lineage4.3.2.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982014 Other lineage4.1.1 None
SRR6982011 Other lineage4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6982035 Sensitive lineage4.9 None
SRR6855917 Other lineage4.8 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982075 Sensitive lineage3 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982070 RR-TB None
SRR6982405 Sensitive None
SRR6856032 Sensitive lineage2.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6982077 MDR-TB lineage4.3.2.1 None
SRR7131053 Other lineage2.2.1 None
ERR5162133 Other La1.8.1 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR9971243 Pre-XDR-TB lineage4.3.3 None
SRR6982558 Other lineage4.3.4.2 None
SRR7131047 MDR-TB lineage4.3.3 None
SRR8073606 Other La1.8.1 None
SRR7131123 Other lineage4.8 None
SRR7131287 Other lineage2.2.1.1 None
SRR7131169 Other lineage4.1.2.1 None
SRR7131185 Other lineage4.1.2.1 None
SRR7645834 Other lineage2.2.1 None
ERR036194 Other lineage4.6.1.2 None
SRR9971235 XDR-TB lineage4.4.1.1.1 None
ERR019572 HR-TB lineage2.2.1 ru
ERR027451 Pre-XDR-TB lineage2.2.1 ru
ERR036185 MDR-TB lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 None
SRR9971195 MDR-TB lineage4.3.3 None
ERR036211 Other lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 None
ERR036225 Other lineage4.3.4.2.1 None
ERR036215 Other lineage4.8 None
ERR036224 HR-TB lineage4.3.4.2.1;lineage1.1.3 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR037235 Sensitive lineage4.9 None
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR037485 Sensitive lineage4.3.4.2.1 mw
ERR037529 Other lineage4.3.4.2.1 None
ERR10796562 Other lineage4.3.4.1 None
ERR1023527 RR-TB lineage4 None
ERR10796593 RR-TB lineage4 None
ERR10796634 Other lineage4 None
ERR10796597 Other lineage4 None
ERR10796626 Other lineage4.1.2 None
ERR10796629 Other lineage4 None
ERR3261389 Other lineage4.9 None
ERR1144989 Sensitive lineage4.8 None
ERR144568 Pre-XDR-TB None
ERR3261351 Other lineage4.9 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3797074 Sensitive lineage4.9 None
ERR3797043 HR-TB None
ERR4769429 Other lineage4.9 None
ERR4187921 Other None
ERR4769424 Sensitive lineage4.9 None
ERR4188330 Other La1.8.1 None
ERR4188352 Other La1.8.1 None
ERR4627379 Other La1.8.1 None
ERR4769518 Sensitive lineage4.9 None
ERR4769507 Sensitive lineage4.9 None
ERR4769505 Other lineage4.9 None
ERR6149874 Other La1.8.2 None
ERR4769525 Sensitive lineage4.9 None
ERR6140667 Other La1.8.2 None
ERR6149870 Other La1.8.2 None
ERR6201798 Other La1.2 None
ERR6197040 Other lineage4.9 None
ERR6198389 Other La1.2 None
ERR6201843 Other La1.2 None
ERR6201802 Other La1.2 None
ERR6362858 Pre-XDR-TB lineage2.2.2 None
ERR9117740 Other lineage3.1.1 None
ERR736816 Other lineage4.9 None
ERR7801177 Other lineage4.3.4.2.1 None
ERR779680 Sensitive lineage4.3.4.2.1 None
ERR7801178 Other lineage4.3.4.2.1 None
ERR9117823 Other lineage1.1.1 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9117827 Other lineage1.2.2.2 None
ERR987757 MDR-TB lineage4.6.1.2 None
ERR987734 HR-TB lineage4.3.4.2 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR1019127 Other lineage4.9;lineage2.2 None
SRR1049031 HR-TB lineage4.9 None
SRR1049030 Pre-XDR-TB lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR11349188 MDR-TB lineage4.1.2.1 None
SRR1140942 Other None
SRR1159158 Other lineage2.2.1 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR1162501 Other lineage2.2.1 None
SRR1173190 Sensitive lineage4.9 None
SRR1180982 Other lineage2.2.1 None
SRR1181136 Sensitive lineage2.2 None
SRR1181161 Other lineage4.9 None
SRR1181319 Other lineage2.2.1 None
SRR1181250 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR11972323 RR-TB lineage1.1.3.2 None
SRR11972311 Pre-XDR-TB None
SRR1184383 Other lineage4.9 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR11972348 MDR-TB lineage2.2.1 None
SRR13591410 Other lineage4.9;lineage4.3.4.1 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR13861244 Other lineage4.9 None
SRR13861312 Other lineage4.9 None
SRR13861438 Other lineage4.9 None
SRR13861457 Other lineage4.9 None
SRR14520040 Sensitive lineage1.1.2 None