EBG00000313339 - n.571T>C
Drug resistance types
45 Sensitive
3 RR-TB
1 HR-TB
10 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG;lineage4.9 | 6 |
| lineage4.3.4.2.1 | 7 |
| lineage4.3.2.1 | 4 |
| lineage4.9 | 20 |
| lineage2.2.1 | 18 |
| lineage3.1.1 | 4 |
| lineage4.2.1 | 6 |
| lineage4.1.2.1 | 4 |
| lineage3 | 2 |
| lineage4.1.4 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.6.1.1 | 6 |
| lineage4.3.3 | 2 |
| lineage4.6.1.2 | 2 |
| lineage4.1.2 | 2 |
| lineage4.8 | 5 |
| La1.2 | 1 |
| lineage4.4 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.7 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| La2 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR037513 | Sensitive | lineage4.3.4.2.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR6045158 | Other | lineage4.9 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | SRR7504773 | Sensitive | lineage4.9 | None | ERR560448 | Other | La1.2.BCG;lineage4.9 | None | ERR560449 | Other | La1.2.BCG;lineage4.9 | None | SRR6045138 | Other | lineage3.1.1 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR7504779 | Sensitive | lineage4.9 | None | SRR7645924 | Pre-XDR-TB | lineage4.2.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | SRR7070276 | Other | lineage3 | None | ERR4815837 | Other | lineage4.1.4 | gb | SRR7070369 | Other | lineage1.2.2.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR11972323 | Other | lineage1.1.3.2 | None | SRR6046117 | Other | lineage4.9 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR1199039 | Sensitive | lineage4.6.1.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR7069628 | Other | lineage4.1.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7645927 | Other | lineage4.8 | None | ERR4772206 | Other | La1.2 | None | ERR1199021 | Other | lineage4.6.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR4819131 | Other | lineage4.8 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR1049735 | Sensitive | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR1049736 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR7444084 | Sensitive | lineage4.9 | None | SRR7504776 | Sensitive | lineage4.9 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR11972175 | Sensitive | lineage2.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR1202611 | Sensitive | lineage4.9 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | SRR7504782 | Sensitive | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR7444074 | Sensitive | lineage4.9 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7504786 | Sensitive | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR036200 | Sensitive | lineage4.1.2 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4829208 | Other | lineage4.8 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465290 | Sensitive | lineage4.9 | None | SRR7444103 | Sensitive | lineage4.9 | None | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | SRR13888750 | Other | La2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6045379 | Sensitive | lineage4.9 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7069981 | Other | lineage3 | None | ERR245848 | Sensitive | lineage4.3.4.2.1 | mw |
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