EBG00000313339 - n.571T>C


Drug resistance types
98 Sensitive 24 RR-TB 23 HR-TB 23 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 166 Other
lineage Counts
lineage Count
lineage3 18
lineage2.2.1 37
19
lineage1.1.3.2 2
lineage1.2.2 2
lineage4.9 51
lineage4.8 23
lineage4.3.4.2.1 8
lineage4 5
lineage4.6.1.1 6
lineage1.2.2.2 4
lineage4.3.4 1
lineage4.3.3 11
lineage4.1.1 6
lineage4.2.1 7
lineage3.1.1 7
lineage4.1.2.1 20
lineage4.4.1.1 7
lineage4.1.3 1
La1.8.2 1
lineage4.6.1 3
lineage4.6.1.2 4
lineage1.1.2 3
lineage3.1.2.1 1
lineage4.1.1.3.1 4
lineage4.2.2 2
lineage4.7 5
lineage4.5 3
lineage1.1.1 3
lineage4.3.4.2 6
lineage4.9.1 1
lineage6.3.1 1
lineage4;lineage3 1
lineage4.3.4.1 3
lineage1.1.3 1
lineage4;lineage3.1.2.1 1
lineage4.1.4 3
lineage4.6.2.2 2
lineage4.1.2 4
lineage4.3.2.1 7
lineage4.1.1.3 5
lineage1.1.3.1 1
La1.6 1
lineage3.1.2 2
lineage4.2.2.2 1
lineage4.3.1.1 3
lineage3.1 1
lineage3.1.2.2 2
lineage4.8.2 2
lineage4.4.1.2 2
lineage4.3.2 1
lineage4.4 2
lineage4;lineage2.2.1 1
lineage4.4.1 1
lineage4;lineage2 1
lineage2.2.1.1 3
lineage4.8;lineage4.2.1 1
lineage4.2.1;lineage2.2.1 1
La1.8.1 7
lineage4.9;La1.8 1
lineage4;La1 1
lineage6.3.2 1
La1.2 1
lineage1.2.2.1 1
lineage5.1.1 2
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage2.2 1
lineage4.9;lineage4.4.2 1
lineage1.1 1
La2 1
lineage2 1
spoligotype Counts
spoligotype Count
None 346
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4815289 Other lineage3 None
SAMN03246352 Pre-XDR-TB lineage2.2.1 cn
ERR176771 Sensitive None
ERR176781 Sensitive lineage1.1.3.2 None
ERR4815225 RR-TB lineage1.2.2 None
ERR176780 Sensitive lineage4.9 None
ERR4815618 Other lineage4.8 None
ERR037485 Sensitive lineage4.3.4.2.1 mw
ERR4814312 Other lineage4 None
ERR245848 Sensitive lineage4.3.4.2.1 mw
ERR1198988 Sensitive lineage4.6.1.1 None
ERR4814362 Other lineage4.8 None
SRR3105736 Other lineage1.2.2.2 None
ERR4815413 Other lineage4.3.4.2.1 None
ERR161125 Sensitive lineage4.3.4 None
ERR4815452 Other lineage4.3.3 None
ERR4814572 Other lineage4.3.3 None
ERR176450 Sensitive lineage4.1.1 None
ERR4815517 Other lineage1.2.2.2 None
ERR4814815 Other lineage4.2.1 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR4815551 Other lineage2.2.1 None
ERR176740 HR-TB None
ERR4816969 Other lineage4.8 None
ERR4815849 Other lineage3.1.1 None
ERR4815919 Other lineage4.8 None
ERR4817008 Other lineage4.1.2.1 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR4817479 Other lineage4.1.3 None
ERR4816133 Other La1.8.2 None
ERR1199039 Sensitive lineage4.6.1 None
ERR4817046 Other lineage3 None
ERR4816882 Other lineage4.8 None
ERR4817055 Other lineage4.1.2.1 None
SAMN02381051 RR-TB lineage4.6.1.2 None
ERR4816429 Other lineage1.1.2 None
ERR4816657 Other lineage3.1.2.1 None
ERR2179850 Sensitive lineage4 None
ERR4816866 Other lineage2.2.1 None
ERR4816876 Pre-XDR-TB lineage4.1.1.3.1 None
ERR1199021 Other lineage4.6.1.1 None
ERR4816696 Other lineage3 None
ERR4817275 Other lineage4.2.2 None
ERR4817987 Other lineage4.7 None
ERR4817826 RR-TB lineage4.5 None
ERR4817703 Other lineage1.1.1 None
ERR4818663 Other lineage3 None
ERR4818008 Other lineage4.3.3 None
ERR2510794 Other lineage4.3.4.2 None
ERR4818548 Other lineage4.3.3 None
ERR4818116 Other lineage4.3.4.2 None
ERR1199007 Sensitive lineage4.6.1.1 None
ERR1199009 Sensitive lineage4.6.1.1 None
ERR2179695 Sensitive lineage4.5 None
ERR4818384 Other lineage4.8 None
ERR2510820 Other lineage4.8 None
ERR1199001 Sensitive lineage4.6.1.1 None
ERR245810 Sensitive lineage4.9.1 None
ERR4818440 Other lineage6.3.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
ERR4819087 Other lineage4.3.3 None
ERR4818580 Other lineage4.7 None
SRR5007165 MDR-TB lineage3 None
ERR4817569 Other lineage4.3.4.1 None
ERR4817551 Other lineage4.9 None
SRR5007168 RR-TB lineage4.9 None
SRR5007174 Other lineage4.3.4.1 None
ERR4820265 Other lineage4.1.2.1 None
ERR4818637 Other lineage4.8 None
ERR4819131 Other lineage4 None
ERR4820717 Other lineage1.1.3 None
ERR4820264 Other lineage1.1.2 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR5341460 Other lineage3 None
ERR4819377 Other lineage4;lineage3.1.2.1 None
ERR4820332 Other lineage2.2.1 None
ERR4820335 Other lineage4.1.2.1 None
ERR4820761 Other lineage4.3.4.2 None
ERR4819553 Other lineage4.1.4 None
ERR4819622 Other lineage4.1.2.1 None
ERR4820397 Other lineage4.9 None
ERR4820416 Other lineage4.1.2.1 None
ERR4819679 Other lineage3 None
ERR4819641 HR-TB lineage4.6.2.2 None
SRR5341430 Other lineage3 None
ERR4820801 Other lineage1.2.2 None
ERR4820827 Other lineage4.1.2 None
ERR4820151 RR-TB lineage4.8 None
SRR5341317 Pre-XDR-TB lineage3 None
ERR2514968 Other lineage4.3.3 None
SAMN02350456 Sensitive lineage4.3.2.1 None
ERR4820967 HR-TB None
ERR4820918 Other lineage4.9 None
ERR2693238 HR-TB lineage4.9 None
ERR4821791 HR-TB lineage4.1.2.1 None
SRR6045464 Other lineage4.1.1.3 None
ERR4821222 Other lineage4.3.2.1 None
SRR6046096 Other lineage4.1.2.1 None
SRR6045516 Other lineage3.1.1 None
SRR6046117 RR-TB lineage4.9 None
ERR4821927 HR-TB lineage4.3.4.1 None
ERR4821722 Other lineage2.2.1 None
ERR4821288 Other lineage4.7 None
ERR4821417 Other lineage1.1.3.1 None
ERR4822104 RR-TB lineage3 None
SRR6046152 Other lineage4.9 None
ERR4821773 Other La1.6 None
SRR6045618 Other lineage3.1.2 None
SRR6045621 Other lineage4.1.1.3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR6045778 Other lineage3.1 None
SRR6044838 Other lineage4.9 None
SRR5818685 Sensitive None
SRR6045894 Other lineage4.8 None
SRR6044784 MDR-TB lineage3 None
SRR6044841 Other lineage4.9 None
SRR6044888 Other lineage4.1.1.3.1 None
SRR6045909 Other lineage4.8 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6044983 Other lineage3.1.1 None
SRR6045957 Other lineage4.9 None
SRR6044993 Other lineage3 None
SRR6045138 Other lineage3.1.1 None
SRR6045045 Other lineage2.2.1 None
SRR6045064 Other lineage4.3.1.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045158 Other lineage4.9 None
SRR6046177 Other lineage3.1.2 None
SRR6045159 Other lineage3.1.1 None
SRR6045222 Other lineage4.1.2.1 None
SRR6045205 Sensitive lineage4.9 None
SRR6045289 Other None
SRR6045308 Other lineage3.1.2.2 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046246 Other lineage3 None
SRR6046291 Other lineage3 None
SRR6046359 Other lineage4.7 None
ERR4829208 RR-TB lineage4.8 None
SRR6046456 Other lineage4.1.1.3.1 None
SRR6046517 Other lineage4.8 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046655 Other lineage4.1.2.1 None
SRR6045379 Other None
SRR6046607 Other lineage3 None
SRR6046710 Other lineage4.8.2 None
ERR502483 Sensitive lineage4.9 None
SRR6046766 Other lineage3.1.1 None
SRR6367397 Other lineage4.1.2.1 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR6982078 Sensitive None
ERR502472 Other lineage4.6.2.2 None
ERR502482 Sensitive lineage4.9 None
SRR6046764 Other lineage4.2.2 None
SRR6046874 Other lineage4.5 None
ERR3148546 Other lineage4.3.2 None
ERR502486 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
SRR6896162 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6982115 Sensitive lineage4 None
SRR6785282 Other lineage4.3.3 None
SRR6982138 Sensitive lineage4 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982196 Sensitive None
SRR6982195 RR-TB lineage4.4 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982227 Other lineage4.1.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982272 Sensitive lineage4.9 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR6981912 Sensitive None
SRR6982471 Sensitive lineage2.2.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6981962 Sensitive None
SRR6981918 Sensitive lineage4.4.1 None
SRR6981948 Sensitive lineage4.3.2.1 None
SRR6855851 Sensitive lineage4.3.4.2.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6982011 Other lineage4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6855917 Other lineage4.8 None
SRR6982035 Sensitive lineage4.9 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982070 RR-TB None
SRR6855963 RR-TB lineage2.2.1 None
ERR4815837 Other lineage4.1.4 gb
SRR6982075 Sensitive lineage3 None
SRR6856032 Sensitive lineage2.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6982510 Sensitive lineage4;lineage2 None
SRR6982558 Other lineage4.3.4.2 None
SRR7131068 Other lineage4.8 None
SRR9971243 Pre-XDR-TB lineage4.3.3 None
SRR7131030 Other lineage4.1.2.1 None
SRR7131053 Other lineage2.2.1 None
SRR7131123 Other lineage4.8 None
SRR7131096 Other lineage4.8 None
SRR7131122 Other lineage2.2.1 None
SRR7131169 Other lineage4.1.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7131216 Other lineage4.1.2.1 None
ERR4818187 Other lineage4.6.1.1 gb
SRR7131251 Other lineage2.2.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971369 MDR-TB lineage4.1.1.3 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645808 HR-TB lineage4.8;lineage4.2.1 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645927 Other lineage4.8 None
SRR7645906 Other lineage2.2.1 None
SRR7645924 Pre-XDR-TB lineage4.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755652 Pre-XDR-TB lineage4.2.1;lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR7755657 Other lineage4.8 None
ERR11465290 Sensitive lineage4.9 None
ERR323061 Sensitive lineage4.9 None
ERR323068 Sensitive lineage4.9 None
SRR9971195 MDR-TB lineage4.3.3 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR1144989 Sensitive lineage4.8 None
ERR10796630 HR-TB None
ERR3261351 Other lineage4.9 None
ERR144568 Pre-XDR-TB None
ERR3324329 HR-TB lineage4.1.1.3 None
ERR3283008 Other lineage4.9 None
ERR4187604 RR-TB La1.8.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4187921 Other None
ERR4187995 Other La1.8.1 None
ERR4187641 Other lineage4;La1 None
ERR4187720 Other La1.8.1 None
ERR4188395 Other La1.8.1 None
ERR4188330 Other La1.8.1 None
ERR4188372 RR-TB La1.8.1 None
ERR4627379 Other La1.8.1 None
ERR4769525 Sensitive lineage4.9 None
ERR4769470 Sensitive lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR4769505 Other lineage4.9 None
ERR4769549 Sensitive lineage4.9 None
ERR4769527 Sensitive lineage4.9 None
ERR5336160 Other lineage6.3.2 None
ERR4772206 Other La1.2 None
ERR718268 Sensitive lineage1.1.1 None
ERR6197042 RR-TB lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR6359064 Sensitive lineage4.9 None
ERR6866821 Sensitive lineage4.1.2.1 None
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR245662 Sensitive lineage1.2.2.1 None
ERR751330 MDR-TB lineage5.1.1 None
ERR751338 Other lineage5.1.1 None
ERR036200 Sensitive lineage4.1.2 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR751317 Sensitive lineage4.9 None
ERR037513 Sensitive lineage4.3.4.2.1 None
ERR037506 Sensitive lineage4.3.4.2.1 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117679 Sensitive lineage2.2.1 None
ERR9117730 Other lineage1.1.2 None
ERR9117747 HR-TB lineage4.8 None
ERR9117740 Other lineage3.1.1 None
ERR9117806 Other lineage4.8 None
ERR9117759 Other lineage3 None
ERR9117841 Other lineage4.8.2 None
ERR9117827 Other lineage1.2.2.2 None
ERR987766 HR-TB lineage4.3.3 None
ERR987757 MDR-TB lineage4.6.1.2 None
ERR987734 HR-TB lineage4.3.4.2 None
SRR1011488 Other lineage2.2.1 None
SRR1019127 Other lineage4.9;lineage2.2 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR1049030 Pre-XDR-TB lineage4.9 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1049031 HR-TB lineage4.9 None
SRR1049724 MDR-TB lineage4.6.1 None
SRR1049744 Sensitive lineage4.6.1 None
SRR1062859 Sensitive lineage2.2.1 None
SRR10869160 Sensitive lineage2.2.1.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR1140942 Other None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR1140586 HR-TB lineage4.9 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR1181136 Sensitive lineage2.2 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1173025 Other lineage4.9 None
SRR1173521 HR-TB lineage4.9 None
SRR1181242 Sensitive lineage4.1.2 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR11972350 MDR-TB lineage2.2.1 None
SRR11972323 RR-TB lineage1.1.3.2 None
SRR11972434 Sensitive lineage2.2.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR12199455 Other None
SRR11972438 HR-TB lineage1.1.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR12199468 Sensitive lineage4.9;lineage4.4.2 None
SRR12199465 Sensitive lineage2.2.1.1 None
SRR124451 HR-TB None
SRR12199472 Sensitive lineage1.1 None
SRR12199486 Other lineage2.2.1 None
SRR13888750 Other La2 None
SRR124452 HR-TB lineage2 None
SRR124453 HR-TB None
SRR19576436 Sensitive None
SRR18213675 Other lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR2101617 Other lineage4.1.1 None
SRR21239946 Other lineage4.1.2.1 None
SRR22424905 RR-TB lineage4.9 None
SRR21675637 Sensitive lineage4.3.3 None
SRR22424875 Sensitive lineage3 None