EBG00000313325 - n.834T>C
Drug resistance types
86 Sensitive
3 RR-TB
19 HR-TB
15 MDR-TB
8 Pre-XDR-TB
2 XDR-TB
120 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1;lineage4.9 | 2 |
| lineage4.2.2 | 12 |
| La1.2 | 1 |
| lineage4.9 | 16 |
| La1.8.1 | 13 |
| lineage1.1 | 1 |
| lineage1.1.3.2 | 4 |
| lineage2.2.1 | 108 |
| lineage4.4.2 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.3.3 | 9 |
| lineage6.3.1 | 2 |
| lineage4.3.4.2.1 | 6 |
| lineage4.8 | 5 |
| lineage4.3.2.1 | 10 |
| lineage4.2.1 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage3 | 4 |
| lineage4.1.1.1 | 4 |
| lineage2.1 | 1 |
| La1.3 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.1.2.1 | 8 |
| lineage1.2.2.2 | 1 |
| lineage6 | 2 |
| lineage4 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage3.1.1 | 3 |
| lineage4.7 | 1 |
| La1.4 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.4.1 | 2 |
| La1.7.1 | 2 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| La1.6 | 1 |
| lineage4.1.1.3 | 1 |
| La3;lineage4 | 1 |
| lineage4.6.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage6.1.1 | 1 |
| lineage4.1.1 | 1 |
| La1.8.X-unk6 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 253 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | ERR4772230 | Other | La1.2 | None | SRR21764250 | Other | lineage4.9 | None | SRR7240506 | Other | La1.8.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR1792267 | Other | La1.8.1 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR27450266 | Sensitive | lineage4.4.2 | None | ERR3276300 | XDR-TB | lineage2.2.1 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | SRR21240141 | Other | lineage4.3.3 | None | ERR3804142 | Sensitive | lineage6.3.1 | None | ERR3559304 | HR-TB | lineage4.2.2 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR16295739 | Other | lineage2.2.1 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR16627757 | Sensitive | lineage3 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR11662417 | Pre-XDR-TB | lineage2.1 | None | ERR4769546 | Other | La1.3 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR10482944 | Other | La1.8.1 | None | SRR16295786 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR4188035 | Other | La1.8.1 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450209 | Sensitive | lineage4.4.2 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR16295749 | Other | lineage2.2.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR7240324 | Other | La1.8.1 | None | SRR16295756 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295776 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | SRR19576436 | Sensitive | lineage1.2.2.2 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR16295754 | Other | lineage2.2.1 | None | ERR9787173 | Sensitive | lineage6 | None | SRR11241401 | MDR-TB | lineage4.3.3 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR16295747 | Other | lineage2.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR3675447 | Other | lineage3 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR16295762 | Other | lineage2.2.1 | None | ERR3283044 | Other | lineage4 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR16295812 | Other | lineage2.2.1 | None | ERR4769424 | Sensitive | lineage4.9 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | SRR17856664 | Sensitive | lineage3 | None | SRR6982484 | Other | lineage3.1.1 | None | SRR6982056 | Other | lineage4.3.4.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR16295802 | Other | lineage2.2.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR3559307 | HR-TB | lineage4.2.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR16295799 | Other | lineage2.2.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR6824519 | MDR-TB | lineage2.2.1 | cn | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR4769505 | Other | lineage4.9 | None | SRR16295758 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16278292 | Other | La1.4 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR8380862 | MDR-TB | lineage2.2.1.1 | in | ERR2600574 | MDR-TB | lineage2.2.1 | None | SRR16295764 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR7236398 | Other | La1.8.1 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR1665402 | MDR-TB | lineage2.2.1 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | ERR4188255 | Sensitive | lineage4.9 | None | SRR18391772 | Other | La1.7.1 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR16295768 | Other | lineage2.2.1 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | SRR21714045 | Other | lineage2.2.1 | None | ERR3148213 | Pre-XDR-TB | lineage4.3.4.1 | mx | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982175 | Sensitive | lineage1.1.3.2 | None | ERR2307498 | HR-TB | lineage2.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR16295757 | Other | lineage2.2.1 | None | ERR3559274 | HR-TB | lineage4.2.2 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR16295765 | Other | lineage2.2.1 | None | ERR3804115 | Sensitive | lineage6 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR16295755 | Other | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | ERR5311080 | Other | La1.8.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | ERR4872272 | XDR-TB | lineage4.2.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | SRR17406743 | HR-TB | lineage1.1.2 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR16295761 | Other | lineage2.2.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR16295797 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | ERR3559284 | HR-TB | lineage4.2.2 | None | SRR2101498 | Sensitive | lineage4.1.1.2 | None | SRR13423641 | Sensitive | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR5067459 | HR-TB | lineage4.2.2 | None | SRR10993936 | Other | La1.6 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295784 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | ERR4188010 | Other | La1.8.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982075 | Sensitive | lineage4.9 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | ERR3559281 | HR-TB | lineage4.2.2 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | ERR5162133 | Sensitive | La1.8.1 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | ERR9787167 | Sensitive | lineage6.3.1 | None | SRR16295748 | Other | lineage2.2.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | SRR18391683 | Other | La1.7.1 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR6982371 | Sensitive | lineage4.1.1.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | SRR7069903 | Other | lineage4.1.1.3.1 | None | SRR1792359 | Other | La1.8.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR18149443 | Sensitive | lineage3 | None | SRR12931719 | Other | lineage4.3.4.2 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | SRR7236374 | Other | La1.8.1 | None | SRR7240420 | Other | La1.8.X-unk6 | None | SRR7240537 | Other | La1.8.1 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR6458434 | Pre-XDR-TB | lineage4.3.3 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | ERR3559279 | HR-TB | lineage4.2.2 | None | SRR2101087 | Other | lineage4.4.2 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | ERR9786543 | Sensitive | lineage4.1.2.1 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769525 | Sensitive | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR7240181 | Other | La1.8.1 | None | SRR3675566 | Other | lineage4.1.2.1 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR16295814 | Other | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None |
|---|
