EBG00000313325 - n.834T>C


Drug resistance types
83 Sensitive 3 RR-TB 19 HR-TB 15 MDR-TB 8 Pre-XDR-TB 2 XDR-TB 123 Other
lineage Counts
lineage Count
lineage2.2.1 108
lineage4.1.1 1
lineage6.3.1 2
lineage4.8 5
lineage4.3.4.2.1 6
La1.8.1 13
La3;lineage4 1
lineage4.2.2 12
La1.7.1 2
lineage4.1.2 1
lineage4.3.2.1 10
lineage4.9 16
La1.8.1;lineage4.9 2
lineage4.1.4 1
lineage4.4.1.1 5
lineage6.1.1 1
lineage2.2.1;lineage4 1
lineage2.2.1;lineage4.9 1
La1.4 1
lineage3 4
lineage4.1.1.2 1
lineage4.3.3 9
lineage1.1 1
lineage1.1.3.2 4
lineage4.1.2.1 8
lineage3.1.1 3
lineage1.2.2.2 1
lineage4.1.1.1 4
lineage4.1.1.3;lineage4.9 1
lineage4.7 1
lineage4.3.2.1;lineage4.9 1
La1.8.X-unk6 1
lineage2.2.1.1 2
lineage4.3.4.1 2
lineage2.1 1
lineage4.1.1.3 1
lineage4 1
lineage6 2
lineage4.2.1 3
La1.6 1
lineage1.1.2 1
lineage4.4.2 3
lineage4.3.2 1
lineage2.2.2 1
lineage4.6.4 1
La1.2 1
La1.3 1
lineage4.3.4.2 2
lineage4.1.1.3.1 1
spoligotype Counts
spoligotype Count
None 253
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR16295830 Other lineage2.2.1 None
SRR6982014 Sensitive lineage4.1.1 None
ERR3804142 Sensitive lineage6.3.1 None
SRR16295761 Other lineage2.2.1 None
SRR2101666 Sensitive lineage4.8 None
SRR16295797 Other lineage2.2.1 None
SRR6981939 Other lineage4.3.4.2.1 None
ERR5162133 Sensitive La1.8.1 None
SRR16295737 Other lineage2.2.1 None
SRR16295758 Other lineage2.2.1 None
ERR3283028 Other La3;lineage4 None
ERR3559279 HR-TB lineage4.2.2 None
ERR3559284 HR-TB lineage4.2.2 None
SRR6982102 Sensitive lineage2.2.1 None
ERR4188010 Other La1.8.1 None
SRR18391683 Other La1.7.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6824624 Sensitive lineage2.2.1 None
SRR6982092 Other lineage4.3.2.1 None
ERR4769505 Other lineage4.9 None
ERR9787167 Sensitive lineage6.3.1 None
SRR16295749 Other lineage2.2.1 None
SRR6982077 Sensitive lineage4.3.2.1 None
ERR4188372 Sensitive La1.8.1;lineage4.9 None
SRR16295748 Other lineage2.2.1 None
ERR2600576 Pre-XDR-TB lineage2.2.1 None
ERR3324351 HR-TB lineage4.1.4 None
SRR16295769 Other lineage2.2.1 None
ERR4769419 Sensitive lineage4.9 None
SRR6982195 Sensitive lineage4.4.1.1 None
ERR3324373 MDR-TB lineage2.2.1 None
SRR16295752 Other lineage2.2.1 None
SRR16295828 Other lineage2.2.1 None
SRR16295772 Other lineage2.2.1 None
ERR9787164 Sensitive lineage6.1.1 None
SRR6982448 Sensitive lineage2.2.1;lineage4 None
ERR4769424 Sensitive lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR6982398 Sensitive lineage2.2.1;lineage4.9 None
SRR16295783 Other lineage2.2.1 None
SRR18391772 Other La1.7.1 None
ERR5311080 Other La1.8.1 None
SRR16278292 Other La1.4 None
SRR6982048 Sensitive lineage4.3.2.1 None
ERR3559276 HR-TB lineage4.2.2 None
SRR6982227 Sensitive lineage4.9 None
ERR7801321 Sensitive lineage4.3.4.2.1 None
SRR2101816 Other lineage4.8 None
SRR6982076 Sensitive lineage4.9 None
SRR11972407 Pre-XDR-TB lineage2.2.1 None
SRR1792359 Other La1.8.1 None
SRR7240181 Other La1.8.1 None
SRR16295787 Other lineage2.2.1 None
SRR16295740 Other lineage2.2.1 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR16295777 Other lineage2.2.1 None
SRR3675447 Other lineage3 None
SRR6981977 Sensitive lineage2.2.1 None
SRR2101498 Sensitive lineage4.1.1.2 None
ERR3559275 HR-TB lineage4.2.2 None
SRR17856664 Sensitive lineage3 None
SRR16295766 Other lineage2.2.1 None
SRR6855963 Sensitive lineage2.2.1 None
SRR6896255 Sensitive lineage4.3.3 None
SRR16295762 Other lineage2.2.1 None
SRR7240506 Other La1.8.1 None
SRR6982414 Sensitive lineage4.9 None
SRR12199472 Sensitive lineage1.1 None
SRR16295806 Other lineage2.2.1 None
SRR16295802 Other lineage2.2.1 None
SRR6982175 Sensitive lineage1.1.3.2 None
SRR16295812 Other lineage2.2.1 None
SRR21240038 Other lineage4.1.2.1 None
SRR6982328 Other lineage3.1.1 None
SRR19576436 Sensitive lineage1.2.2.2 None
SRR6982037 Sensitive lineage4.1.1.1 None
SRR16295782 Other lineage2.2.1 None
SRR2101663 Sensitive lineage1.1.3.2 None
SRR16295747 Other lineage2.2.1 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
SRR16295821 Other lineage2.2.1 None
SRR16295829 Other lineage2.2.1 None
SRR16295757 Other lineage2.2.1 None
ERR3324375 Other lineage1.1.3.2 None
ERR867540 MDR-TB lineage2.2.1 None
ERR3559274 HR-TB lineage4.2.2 None
SRR21240141 Other lineage4.3.3 None
SRR6981975 Sensitive lineage4.7 None
ERR6866186 Sensitive lineage4.8 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
SRR16295791 Other lineage2.2.1 None
ERR2600574 MDR-TB lineage2.2.1 None
ERR3559307 HR-TB lineage4.2.2 None
SRR16295799 Other lineage2.2.1 None
SRR7240537 Other La1.8.1 None
SRR16295793 Other lineage2.2.1 None
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
SRR16295767 Other lineage2.2.1 None
SRR7240420 Other La1.8.X-unk6 None
SRR16295817 Other lineage2.2.1 None
SRR16295790 Other lineage2.2.1 None
SRR16295742 Other lineage2.2.1 None
SRR16295753 Other lineage2.2.1 None
SRR16295775 Other lineage2.2.1 None
SRR16295743 Other lineage2.2.1 None
SRR16295809 Other lineage2.2.1 None
SRR7236398 Other La1.8.1 None
SRR16295785 Other lineage2.2.1 None
SRR16295825 Other lineage2.2.1 None
SRR16295741 Other lineage2.2.1 None
SRR18911000 Sensitive lineage2.2.1 None
SRR15723110 Sensitive lineage2.2.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6982105 Sensitive lineage2.2.1.1 None
ERR1665402 MDR-TB lineage2.2.1 None
SRR7069347 Other lineage4.1.2.1 None
SRR7070134 Other lineage3.1.1 None
SRR21676318 Sensitive lineage2.2.1 None
ERR3148213 Pre-XDR-TB lineage4.3.4.1 mx
SRR6982057 HR-TB lineage4.3.3 None
SRR6982371 Sensitive lineage4.1.1.1 None
ERR2515721 Sensitive lineage4.3.2.1 None
SRR2101827 Other lineage4.3.4.2.1 None
SRR16295764 Other lineage2.2.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR11662417 Pre-XDR-TB lineage2.1 None
SRR16295773 Other lineage2.2.1 None
SRR18149430 Sensitive lineage4.1.1.3 None
SRR6458434 Pre-XDR-TB lineage4.3.3 None
SRR18002907 MDR-TB lineage2.2.1 None
ERR3283044 Other lineage4 None
SRR16295746 Other lineage2.2.1 None
ERR3559281 HR-TB lineage4.2.2 None
ERR2660524 HR-TB lineage1.1.3.2 None
SRR16295808 Other lineage2.2.1 None
SRR6981941 Sensitive lineage4.3.4.2.1 None
SRR16295811 Other lineage2.2.1 None
SRR16295750 Other lineage2.2.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR16295801 Other lineage2.2.1 None
ERR9787173 Sensitive lineage6 None
SRR6982514 Sensitive lineage4.3.3 None
SRR6824519 MDR-TB lineage2.2.1 cn
SRR16295780 Other lineage2.2.1 None
SRR18149455 Sensitive lineage4.1.2.1 None
SRR16295814 Other lineage2.2.1 None
SRR16295819 Other lineage2.2.1 None
SRR16295807 Other lineage2.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
ERR3324354 Sensitive lineage4.8 None
SRR16295822 Other lineage2.2.1 None
SRR16295786 Other lineage2.2.1 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR4872272 XDR-TB lineage4.2.1 None
SRR6807688 Pre-XDR-TB lineage4.2.1 None
SRR13423629 MDR-TB lineage2.2.1 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR10993936 Other La1.6 None
ERR3276300 XDR-TB lineage2.2.1 None
SRR6982056 Other lineage4.3.4.2.1 None
ERR2307498 HR-TB lineage2.2.1 None
SRR2101636 Other lineage4.3.2.1 None
SRR13423641 Sensitive lineage2.2.1 None
SRR5067459 HR-TB lineage4.2.2 None
SRR17406743 HR-TB lineage1.1.2 None
ERR9786543 Sensitive lineage4.1.2.1 None
SRR16295804 Other lineage2.2.1 None
SRR27450266 Sensitive lineage4.4.2 None
SRR16295760 Other lineage2.2.1 None
SRR8217919 HR-TB lineage2.2.1 None
SRR10808496 Sensitive lineage4.3.2 None
SRR8380862 MDR-TB lineage2.2.1.1 in
SRR2101617 Sensitive lineage4.1.1.1 None
SRR16295739 Other lineage2.2.1 None
SRR16295792 Other lineage2.2.1 None
SRR7240324 Other La1.8.1 None
SRR6982075 Sensitive lineage4.9 None
SRR16295755 Other lineage2.2.1 None
SRR16295788 Other lineage2.2.1 None
ERR4188035 Other La1.8.1 None
SRR1792267 Other La1.8.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR18149443 Sensitive lineage3 None
SRR16295738 Other lineage2.2.1 None
SRR16295813 Other lineage2.2.1 None
SRR10482944 Other La1.8.1 None
ERR3324331 MDR-TB lineage4.3.4.1 None
ERR3559287 HR-TB lineage4.2.2 None
ERR5865118 MDR-TB lineage2.2.1 None
SRR16295745 Other lineage2.2.1 None
ERR3283043 Other lineage4.9 None
SRR2101685 Sensitive lineage4.9 None
SRR10869086 Pre-XDR-TB lineage2.2.2 None
ERR4188255 Sensitive lineage4.9 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR8025347 Sensitive lineage4.9 None
SRR16295756 Other lineage2.2.1 None
SRR1791899 Sensitive La1.8.1;lineage4.9 None
SRR16295744 Other lineage2.2.1 None
SRR27450209 Sensitive lineage4.4.2 None
SRR16295771 Other lineage2.2.1 None
ERR2515148 Sensitive lineage4.3.3 None
SRR16295768 Other lineage2.2.1 None
ERR4769525 Sensitive lineage4.9 None
SRR16295826 Other lineage2.2.1 None
SRR7236374 Other La1.8.1 None
ERR1679641 Other lineage4.6.4 None
SRR6982022 Sensitive lineage4.4.1.1 None
ERR4769507 Sensitive lineage4.9 None
SRR21714045 Other lineage2.2.1 None
SRR11241401 MDR-TB lineage4.3.3 None
SRR3675566 Other lineage4.1.2.1 None
ERR5864322 MDR-TB lineage4.2.1 None
SRR16295824 Other lineage2.2.1 None
ERR3559283 HR-TB lineage4.2.2 None
SRR16295754 Other lineage2.2.1 None
SRR16295770 Other lineage2.2.1 None
SRR16295820 Other lineage2.2.1 None
SRR16295763 Other lineage2.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR16295751 Other lineage2.2.1 None
SRR6982139 Sensitive lineage4.9 None
SRR16295798 Other lineage2.2.1 None
SRR16295810 Other lineage2.2.1 None
ERR4772230 Other La1.2 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR16295776 Other lineage2.2.1 None
SRR21764250 Other lineage4.9 None
SRR15368914 MDR-TB lineage2.2.1 None
ERR4769546 Other La1.3 None
SRR16295816 Other lineage2.2.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR2101087 Other lineage4.4.2 None
SRR6981948 Sensitive lineage4.3.2.1 None
SRR6982484 Other lineage3.1.1 None
SRR16295784 Other lineage2.2.1 None
ERR7801314 Sensitive lineage4.3.4.2 None
SRR2101774 Sensitive lineage2.2.1 None
ERR3559304 HR-TB lineage4.2.2 None
SRR16295765 Other lineage2.2.1 None
SRR7069903 Other lineage4.1.1.3.1 None
ERR2515854 Sensitive lineage2.2.1 None
ERR3804115 Sensitive lineage6 None
SRR21714038 Sensitive lineage4.3.3 None
ERR3324347 Sensitive lineage4.1.2.1 None
SRR6982419 Other lineage4.8 None
SRR6982011 Sensitive lineage4.1.1.1 None
ERR2600577 Pre-XDR-TB lineage2.2.1 None
ERR3324328 MDR-TB lineage2.2.1 None
SRR6982090 RR-TB lineage4.4.1.1 None
SRR16627757 Sensitive lineage3 None
ERR3559282 HR-TB lineage4.2.2 None
SRR12931719 Other lineage4.3.4.2 None