EBG00000313325 - n.888G>C
Drug resistance types
142 Sensitive
3 RR-TB
5 HR-TB
10 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 4 |
| lineage4.9 | 100 |
| lineage1.1.3.2 | 2 |
| lineage4.1.2.1 | 4 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.3.4.2.1 | 12 |
| lineage4.1.2 | 3 |
| lineage5.1.3 | 1 |
| lineage4.1.1.3 | 3 |
| La1.8.1 | 10 |
| lineage6.1.3 | 1 |
| lineage2.2.1 | 18 |
| lineage4.2.1 | 2 |
| lineage4.8 | 3 |
| lineage1.1.1.1 | 1 |
| lineage2.2.2 | 8 |
| La1.8.1;lineage4.9 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage1.1.2 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4.3.2.1 | 6 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.1 | 1 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.1 | 1 |
| lineage3 | 2 |
| lineage4.8.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.2 | 1 |
| lineage4.2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 209 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1183419 | Sensitive | lineage4.9 | None | SRR3725591 | Sensitive | lineage4.9 | None | SRR1180017 | Other | lineage4.9 | None | SRR6982508 | Sensitive | lineage4.9 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR1183677 | Sensitive | lineage4.9 | None | ERR4188375 | Sensitive | lineage4.9 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR1180764 | Sensitive | lineage4.9 | None | SRR1183417 | Sensitive | lineage4.9 | None | SRR1182888 | Sensitive | lineage4.9 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR3725585 | Sensitive | lineage4.9 | None | ERR9786558 | Other | lineage4.3.4.2 | None | SRR1183421 | Sensitive | lineage4.9 | None | SRR3725595 | Sensitive | lineage4.9 | None | ERR126614 | Sensitive | lineage4.3.4.2.1 | None | ERR181761 | Sensitive | lineage4.3.4.2.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR221583 | Sensitive | lineage4.1.2 | None | SRR3675566 | Other | lineage4.1.2.1 | None | ERR751310 | Sensitive | lineage5.1.3 | None | SRR1183207 | Sensitive | lineage4.9 | None | SRR1180204 | Other | lineage4.9 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4188213 | Other | La1.8.1 | None | SRR1180731 | Other | lineage4.9 | None | ERR9787079 | Other | lineage6.1.3 | None | SRR4033344 | Sensitive | lineage2.2.1 | za | ERR2179737 | HR-TB | lineage4.2.1 | None | SRR3725593 | Sensitive | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR1183704 | Other | lineage4.9 | None | SRR4033342 | Sensitive | lineage2.2.1 | za | ERR108424 | Sensitive | lineage4.8 | None | SRR6153149 | Sensitive | lineage1.1.1.1 | ca | ERR5865993 | MDR-TB | lineage2.2.1 | None | SRR1181184 | Sensitive | lineage4.9 | None | SRR1181505 | Sensitive | lineage4.9 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR5065352 | Sensitive | lineage2.2.1 | None | SRR1183279 | Sensitive | lineage4.9 | None | SRR1183601 | Other | lineage4.9 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR1183377 | Sensitive | lineage4.9 | None | ERR245809 | Sensitive | lineage4.3.4.1 | None | SRR17406743 | HR-TB | lineage1.1.2 | None | SRR3725589 | Sensitive | lineage4.9 | None | SRR1181228 | Sensitive | lineage4.9 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR1180796 | Sensitive | lineage4.9 | None | SRR1182889 | Other | lineage4.9 | None | ERR212162 | Sensitive | lineage4.3.4.2.1 | None | SRR1180623 | Sensitive | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR1181287 | Sensitive | lineage4.9 | None | SRR1181591 | Sensitive | lineage4.9 | None | SRR1183687 | Other | lineage4.9 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR1181542 | Other | lineage4.9 | None | SRR1183096 | Sensitive | lineage4.9 | None | SRR1183238 | Other | lineage4.9 | None | SRR1183389 | Sensitive | lineage4.9 | None | SRR1181482 | Sensitive | lineage4.9 | None | SRR1183318 | Sensitive | lineage4.9 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR3725594 | Sensitive | lineage4.9 | None | SRR4037868 | Sensitive | lineage4.3.2.1 | None | SRR1180138 | Sensitive | lineage4.9 | None | ERR133893 | Sensitive | lineage4.8 | ru | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR1180518 | Other | lineage4.9 | None | SRR1183692 | Sensitive | lineage4.9 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SRR14782418 | Sensitive | lineage2.2.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR1180083 | Sensitive | lineage4.9 | None | SRR1181593 | Other | lineage4.9 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183195 | Sensitive | lineage4.9 | None | SRR1180543 | Sensitive | lineage4.9 | None | ERR4188352 | Sensitive | La1.8.1 | None | SRR1180174 | Other | lineage4.9 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1183023 | Sensitive | lineage4.9 | None | SRR1180714 | Sensitive | lineage4.9 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SRR4033385 | Sensitive | lineage2.2.1 | za | ERR133816 | MDR-TB | lineage2.2.1 | None | SRR3725599 | Sensitive | lineage4.9 | None | ERR176690 | Sensitive | lineage4.3.4.2.1 | mw | SRR6982257 | Sensitive | lineage4.1.2.1 | None | SRR1182911 | Sensitive | lineage4.9 | None | SRR1183543 | Sensitive | lineage4.9 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | ERR4187995 | Sensitive | La1.8.1 | None | ERR4809194 | RR-TB | lineage2.2.1 | None | ERR5162108 | Other | La1.8.1 | None | SRR1180019 | Other | lineage4.9 | None | SRR11342635 | MDR-TB | lineage4.8 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | SRR1181587 | Other | lineage4.9 | None | SRR3725597 | Sensitive | lineage4.9 | None | SRR1181232 | Sensitive | lineage4.9 | None | SRR1180118 | Sensitive | lineage4.9 | None | SRR1180144 | Sensitive | lineage4.9 | None | SRR1181360 | Sensitive | lineage4.9 | None | SRR1183126 | Other | lineage4.9 | None | SRR1182982 | Other | lineage4.9 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | SRR3725596 | Sensitive | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR1792265 | Other | La1.8.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | SRR6789621 | Other | lineage4.9 | None | SRR1180758 | Sensitive | lineage4.9 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR4188035 | Other | La1.8.1 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR181708 | RR-TB | lineage1.1.2;lineage4 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR1181589 | Other | lineage4.9 | None | SRR3725598 | Sensitive | lineage4.9 | None | SRR1181291 | Sensitive | lineage4.9 | None | SRR1183668 | Sensitive | lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | SRR1181488 | Sensitive | lineage4.9 | None | SRR14781887 | MDR-TB | lineage4.2.1 | None | SRR3725587 | Sensitive | lineage4.9 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183325 | Other | lineage4.9 | None | SRR1181194 | Sensitive | lineage4.9 | None | SRR18149443 | Sensitive | lineage3 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | SRR1183672 | Sensitive | lineage4.9 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR1181574 | Sensitive | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | SRR1183173 | Sensitive | lineage4.9 | None | SRR1180737 | Other | lineage4.9 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180235 | Other | lineage4.9 | None | SRR7236233 | Other | La1.8.1 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | SRR1180041 | Sensitive | lineage4.9 | None | SRR1183075 | Sensitive | lineage4.9 | None | SRR1182966 | Sensitive | lineage4.9 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR1180554 | Sensitive | lineage4.9 | None | SRR7240350 | Other | La1.8.1 | None | SRR3725588 | Sensitive | lineage4.9 | None | SRR1181582 | Other | lineage4.9 | None | ERR4187921 | Sensitive | lineage4.9 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | SRR4033383 | Sensitive | lineage2.2.1 | za | SRR1181275 | Sensitive | lineage4.9 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR13199734 | Other | La1.2 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR1180018 | Sensitive | lineage4.9 | None | SRR1183328 | Sensitive | lineage4.9 | None | SRR1183604 | Sensitive | lineage4.9 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | SRR1180610 | Sensitive | lineage4.9 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR1183241 | Other | lineage4.9 | None | SRR8599999 | Other | La1.8.1 | None | ERR161047 | Sensitive | lineage4.4.1.1 | None | SRR1180493 | Sensitive | lineage4.9 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183210 | Sensitive | lineage4.9 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | SRR1182929 | Other | lineage4.9 | None | SRR1181398 | Other | lineage4.9 | None | SRR1183113 | Sensitive | lineage4.9 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3725586 | Sensitive | lineage4.9 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None |
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