EBG00000313325 - n.377G>A
Drug resistance types
74 Sensitive
1 RR-TB
7 HR-TB
13 MDR-TB
23 Pre-XDR-TB
9 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 19 |
| La1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.2.2.1 | 2 |
| lineage5.1.1 | 1 |
| lineage4.3.3 | 12 |
| lineage2.2.2 | 18 |
| lineage4.3.2.1 | 5 |
| La1.8.1 | 8 |
| lineage4.1.2.1 | 6 |
| lineage4.9 | 50 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.1.3 | 4 |
| lineage1.2.2.2 | 4 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1.1 | 4 |
| lineage3 | 5 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.2.2.2 | 4 |
| lineage2.2.1;lineage4.5 | 1 |
| La1.8.1;lineage4.9 | 3 |
| lineage2.2.2;lineage4 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.1.1 | 4 |
| La1.4 | 1 |
| lineage4.8 | 3 |
| lineage4.1.4 | 1 |
| lineage3.1.1 | 3 |
| lineage1.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| 1 | |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 179 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR4033383 | Sensitive | lineage2.2.1 | za | ERR4769478 | Other | La1.2 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR502517 | Other | lineage5.1.1 | None | ERR9992612 | XDR-TB | lineage4.3.3 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | ERR1873510 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | ERR1815548 | Other | La1.8.1 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | SRR1208395 | Other | lineage4.9 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | SRR1181231 | Other | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | ERR9993145 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180579 | Other | lineage4.9 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR1208861 | Other | lineage4.9 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | ERR9993029 | MDR-TB | lineage4.3.3 | None | SRR18149443 | Sensitive | lineage3 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR9993215 | XDR-TB | lineage2.2.2 | None | ERR3275866 | Other | lineage4.1.2.1 | nl | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR9993119 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | SRR1202407 | Other | lineage4.9 | None | SRR1183315 | Other | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1202417 | Other | lineage4.9 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR270771 | HR-TB | lineage3 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR3439443 | Other | La1.8.1 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | ERR4809194 | RR-TB | lineage2.2.1 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993030 | Pre-XDR-TB | lineage2.2.2 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1180617 | Other | lineage4.9 | None | SRR1208947 | Other | lineage4.9 | None | SRR1183290 | Other | lineage4.9 | None | SRR1183287 | Other | lineage4.9 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR9993227 | XDR-TB | lineage2.2.1 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | ERR473278 | Sensitive | lineage4.9 | None | SRR1208249 | Sensitive | lineage4.9 | None | ERR9992810 | XDR-TB | lineage2.2.2 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | SRR1238557 | Other | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | ERR4188187 | Sensitive | La1.8.1 | None | ERR9992817 | XDR-TB | lineage2.2.2 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR16278292 | Other | La1.4 | None | SRR1180209 | Other | lineage4.9 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR1183068 | Other | lineage4.9 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342680 | Other | lineage4.8 | None | SRR1183369 | Other | lineage4.9 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR4586795 | Other | La1.8.1 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | ERR9992790 | XDR-TB | lineage2.2.2 | None | SRR1183069 | Other | lineage4.9 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR144557 | Sensitive | lineage4.8 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4627379 | Other | La1.8.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR1208612 | Other | lineage4.9 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR19576436 | Sensitive | lineage1.2.2.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR1208763 | Other | lineage4.9 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR5341460 | Other | lineage3 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR9992725 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1208872 | Sensitive | lineage4.9 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | SRR21764250 | Other | lineage4.9 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | ERR5758436 | Other | lineage2.2.2 | None | ERR9992711 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1180624 | Other | lineage4.9 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993196 | XDR-TB | lineage2.2.2 | None | ERR144568 | Sensitive | None | SRR1183121 | Other | lineage4.9 | None | ERR9993167 | XDR-TB | lineage2.2.2 | None | SRR6789621 | Other | lineage4.9 | None | SRR1049031 | Sensitive | lineage4.9 | None | SRR1208979 | Other | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1208683 | Other | lineage4.9 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR1180048 | Other | lineage4.9 | None | SRR1202569 | Other | lineage4.9 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR1049030 | Sensitive | lineage4.9 | None | SRR1202507 | Other | lineage4.9 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR190399 | Sensitive | lineage4.3.4.2.1 | mw | SRR1181199 | Other | lineage4.9 | None | ERR181864 | Sensitive | lineage3.1.1 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | SRR1208194 | Other | lineage4.9 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR1873482 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183523 | Other | lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | ERR5758391 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993028 | XDR-TB | lineage2.2.2 | None | SRR1208421 | Other | lineage4.9 | None | SRR1208677 | Other | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR1202489 | Other | lineage4.9 | None | SRR6832659 | Other | lineage4.2.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | SRR1208731 | Sensitive | lineage4.9 | None | SRR1208768 | Other | lineage4.9 | None | SRR1180822 | Other | lineage4.9 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR473367 | Sensitive | lineage4.9 | None | SRR1208798 | Other | lineage4.9 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | ERR4188160 | Other | La1.8.1 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | ERR4187921 | Sensitive | lineage4.9 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None |
|---|
