EBG00000313325 - n.856T>A
Drug resistance types
60 Sensitive
11 RR-TB
10 HR-TB
14 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
147 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 108 |
| lineage4.3.2.1 | 11 |
| lineage3 | 6 |
| lineage4.4.1.1 | 5 |
| lineage4.3.3 | 8 |
| La1.2.BCG | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.2.2 | 1 |
| lineage4.9 | 20 |
| lineage4 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 6 |
| lineage4.3.4.2.1 | 8 |
| lineage2.2.1.1 | 3 |
| lineage1.1.3.2 | 2 |
| lineage4.1.1.2 | 2 |
| lineage4.1.1 | 6 |
| lineage4.4 | 1 |
| lineage3.1.1 | 4 |
| lineage4.1.2 | 2 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage2.2 | 1 |
| lineage4.3 | 1 |
| lineage5.1.1 | 1 |
| La1.8.1 | 13 |
| lineage4.3.4.2 | 2 |
| La2 | 1 |
| lineage4.8;lineage4.2.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage1.1.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9;La1.8 | 2 |
| lineage6 | 2 |
| lineage4;La1.8.1 | 1 |
| La1.3 | 2 |
| La1.2 | 3 |
| lineage4.6.1.2 | 5 |
| lineage4.6.1.2;lineage4.4.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 2 |
| lineage1.1 | 1 |
| La1.7.1 | 3 |
| La1.7 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 252 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02584601 | Other | lineage2.2.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR5341278 | HR-TB | lineage3 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | ERR4820186 | Other | La1.2.BCG | None | SRR6046864 | Other | lineage3 | gb | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR2516270 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822221 | Sensitive | lineage4.2.2 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6896577 | Sensitive | lineage4.8 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6855768 | Other | lineage4.3.2.1 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6824519 | MDR-TB | lineage2.2.1 | cn | SRR6981997 | Sensitive | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6982033 | Sensitive | lineage2.2.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311093 | Other | La1.8.1 | None | ERR5162118 | Other | La1.8.1 | None | ERR5162133 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR847801 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970980 | Other | lineage4.1.2 | None | DRR120409 | HR-TB | La2 | None | SRR7645808 | HR-TB | lineage4.8;lineage4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR3283053 | Other | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | ERR3439279 | Other | lineage4.9;La1.8 | None | ERR400319 | Other | lineage4.8 | gb | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR3804115 | Sensitive | lineage6 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187952 | Other | La1.8.1 | None | ERR4188010 | Other | La1.8.1 | None | ERR4188033 | Other | lineage4;La1.8.1 | None | ERR4188158 | Other | lineage4.9 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4188253 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769503 | Other | La1.2 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4772230 | Other | La1.2 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866714 | Sensitive | lineage2.2.1 | None | ERR6866872 | Other | lineage4.1.1 | None | ERR736816 | Other | lineage4.9 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4772215 | Other | La1.3 | None | ERR9119846 | RR-TB | lineage3.1.1 | None | ERR9787173 | Sensitive | lineage6 | None | SRR10482944 | Other | La1.8.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062873 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1166110 | Other | lineage2.2.1 | None | SRR1169017 | Other | lineage2.2.1 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11294512 | Other | La1.8.1 | None | SRR11972227 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR13199734 | Other | La1.2 | None | SRR13199739 | Other | La1.7.1 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295747 | Other | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR16295749 | Other | lineage2.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR16295748 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR16295754 | Other | lineage2.2.1 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295758 | Other | lineage2.2.1 | None | SRR16295755 | Other | lineage2.2.1 | None | SRR16295756 | Other | lineage2.2.1 | None | SRR16295757 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR16295762 | Other | lineage2.2.1 | None | SRR16295761 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295764 | Other | lineage2.2.1 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR16295768 | Other | lineage2.2.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295739 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295786 | Other | lineage2.2.1 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16295776 | Other | lineage2.2.1 | None | SRR16295734 | Other | lineage2.2.1 | None | SRR16295774 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR16295784 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295797 | Other | lineage2.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR16295799 | Other | lineage2.2.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR16295794 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295805 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR16295802 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR16295831 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR16295815 | Sensitive | lineage2.2.1 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR16627757 | Sensitive | lineage3 | None | SRR2101498 | Sensitive | lineage4.1.1.2 | None | SRR17111238 | Other | La1.7 | None | SRR17856664 | Sensitive | lineage3 | None | SRR1792359 | Other | La1.8.1 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18053779 | Other | La1.7.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101647 | Sensitive | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | ERR181733 | Sensitive | lineage4.3.4.2.1 | None | SRR8692842 | Other | lineage4.9 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | ERR3276300 | Pre-XDR-TB | lineage2.2.1 | None | ERR176640 | Sensitive | lineage4.3.4.2.1 | mw | ERR1679641 | Other | lineage4.6.4 | None | ERR4817496 | Other | lineage4.1.2.1 | gb | ERR2516375 | MDR-TB | lineage4.3.3 | None | ERR4816101 | Other | lineage4.1.2.1 | None | ERR4817266 | Other | lineage3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None |
|---|
