EBG00000313325 - n.909G>T
Drug resistance types
124 Sensitive
22 RR-TB
14 HR-TB
32 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 64 |
| lineage2.2.1 | 34 |
| lineage4.6.1.1 | 18 |
| lineage2.2.1.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1 | 6 |
| lineage4.3.4.2.1 | 6 |
| lineage4.1.2.1 | 13 |
| lineage1.2.2.2 | 4 |
| lineage4.6.1 | 3 |
| lineage1.2.1.2.1 | 2 |
| lineage4.8 | 8 |
| lineage4.3.3 | 7 |
| lineage4.3.4.2 | 4 |
| La1.8.1 | 4 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.1.2 | 7 |
| lineage4.3.1 | 1 |
| lineage4.6 | 4 |
| lineage4.1.1 | 3 |
| lineage3 | 6 |
| lineage4.2.1.1 | 3 |
| lineage2.2.1.2 | 4 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4 | 4 |
| lineage4.3.4.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.9;La1.8.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.7;lineage4.3.4.2 | 1 |
| lineage5.1.1 | 5 |
| lineage6.2.1 | 1 |
| lineage5.1.2 | 1 |
| lineage4.1.1.3 | 9 |
| lineage6.3.1 | 1 |
| lineage4.1.1.2 | 2 |
| lineage2.2 | 2 |
| lineage3.1.2.1 | 3 |
| 4 | |
| lineage4.9;lineage4.2.1 | 1 |
| lineage2.2.2 | 3 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1;lineage3.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.4.2;lineage4.2.2;lineage2.2.1 | 1 |
| lineage4.9;lineage4.3 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.4 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1;lineage1 | 1 |
| La1.2.BCG | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4;lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 271 |
Geographic prevalence
Country level data for this variant is available for 34 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819395 | Sensitive | lineage4.9 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR1199073 | Sensitive | lineage4.6.1.1 | ug | ERR4819534 | Sensitive | lineage2.2.1.1 | None | ERR2515712 | Sensitive | lineage4.3.2.1 | None | ERR464762 | Sensitive | lineage4.4.1.1 | ch | ERR2515999 | Sensitive | lineage4.3.4.2.1 | None | ERR4819787 | Other | lineage4.1.2.1 | None | ERR1199089 | Sensitive | lineage4.6.1.1 | ug | ERR4819910 | Other | lineage4.9 | None | ERR4820537 | HR-TB | lineage1.2.2.2 | None | ERR1199077 | Sensitive | lineage4.6.1 | ug | ERR1193653 | Sensitive | lineage4.3.4.2.1 | ug | ERR1199088 | Sensitive | lineage4.6.1.1 | ug | ERR4820844 | Sensitive | lineage4.9 | None | ERR1873459 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4821051 | Other | lineage1.2.1.2.1 | None | ERR4820845 | MDR-TB | lineage4.8 | None | ERR1199082 | Sensitive | lineage4.6.1.1 | None | ERR1193651 | Sensitive | lineage4.3.3 | cd | ERR4821138 | Sensitive | lineage4.3.4.2 | gb | ERR2747620 | Sensitive | lineage4.9 | None | ERR2747615 | Sensitive | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | ERR2747622 | Sensitive | lineage4.9 | None | ERR2747656 | Other | La1.8.1 | None | ERR4821300 | Other | lineage4.3.4.2 | gb | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR6044862 | Sensitive | lineage4.9 | None | SRR6045058 | HR-TB | lineage4.3.3 | None | ERR4828807 | Pre-XDR-TB | lineage4.1.2 | None | SRR6045162 | Sensitive | lineage4.9 | None | ERR4829040 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829196 | Other | lineage4.1.2 | None | ERR464729 | MDR-TB | lineage4.4.1.1 | ch | ERR4828804 | MDR-TB | lineage4.3.1 | None | ERR4829264 | Sensitive | lineage4.8 | None | ERR4828470 | Sensitive | lineage2.2.1 | vn | ERR4828805 | Other | lineage4.6 | None | ERR4828810 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828811 | Other | lineage4.1.1 | None | SRR7131113 | Sensitive | lineage3 | None | ERR4831631 | HR-TB | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6855896 | Other | lineage4.3.4.2.1 | None | ERR2987807 | Sensitive | lineage4.2.1.1 | None | ERR502942 | Sensitive | lineage4.9 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR7131035 | Sensitive | lineage4.8 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131122 | Other | lineage2.2.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | SRR6855957 | Sensitive | lineage2.2.1 | None | ERR2987809 | Sensitive | lineage4.2.1.1 | None | ERR5162126 | Sensitive | lineage4.9 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | SRR7131133 | Sensitive | lineage4.1.2.1 | None | SRR7453034 | Sensitive | lineage2.2.1.2 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | SRR7453032 | Sensitive | lineage2.2.1.2 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | SRR833109 | MDR-TB | lineage4.4.1.1.1 | None | SRR833052 | Sensitive | lineage4.9 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR8649119 | Other | lineage4.6 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | SRR7755705 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | ERR10796569 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR3283035 | Sensitive | lineage4.9 | None | ERR126611 | Sensitive | lineage4.9.1 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR3439235 | Sensitive | lineage4.9 | None | ERR3468789 | Sensitive | lineage4.9 | None | ERR3468578 | Other | La1.8.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR405201 | Sensitive | lineage4.3.4.2.1 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR405215 | Sensitive | lineage2.2.1 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR4188158 | Other | lineage4.9 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR4627345 | Other | La1.8.1 | None | ERR4627368 | Other | La1.8.1 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR473308 | HR-TB | lineage4.3.4.2.1 | None | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR5865065 | MDR-TB | lineage4.8 | None | ERR5979790 | Sensitive | lineage4.9 | None | ERR5865066 | MDR-TB | lineage4.8 | None | ERR5979787 | Other | lineage4.9 | None | ERR5865230 | MDR-TB | lineage2.2.1 | None | ERR5979445 | Sensitive | lineage3 | None | ERR5979822 | Sensitive | lineage4.9 | None | ERR5979791 | Sensitive | lineage4.9 | None | ERR5979789 | Other | lineage4.9 | None | ERR5979801 | Sensitive | lineage4.9 | None | ERR5979817 | Sensitive | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR5979826 | Sensitive | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197023 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR751336 | Sensitive | lineage5.1.1 | None | ERR751332 | Sensitive | lineage6.2.1 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR751329 | Sensitive | lineage5.1.1 | None | ERR751414 | MDR-TB | lineage4 | None | ERR751338 | Other | lineage5.1.1 | None | ERR751328 | Sensitive | lineage5.1.1 | None | ERR751339 | Sensitive | lineage5.1.2 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR970453 | RR-TB | lineage4.1.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR970448 | RR-TB | lineage4.1.1.3 | None | ERR970451 | RR-TB | lineage4.1.2.1 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | ERR970459 | RR-TB | lineage4.1.1 | None | ERR970450 | RR-TB | lineage4.1.1.3 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR972802 | RR-TB | lineage4.1.1.3 | None | ERR970452 | RR-TB | lineage4.1.2.1 | None | ERR970454 | RR-TB | lineage4.1.2 | None | ERR9891984 | Sensitive | lineage6.3.1 | None | ERR972799 | RR-TB | lineage4.1.2.1 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | ERR983250 | RR-TB | lineage4.1.1 | None | SRR10315589 | MDR-TB | lineage4.3.3 | None | SRR057732 | Sensitive | lineage4.1.1.2 | ca | SRR057768 | Sensitive | lineage4.1.1.2 | ca | SRR1165236 | Pre-XDR-TB | lineage2.2 | None | SRR1140576 | Sensitive | lineage4.6.1.1 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR1140595 | Sensitive | lineage4.6.1.1 | None | SRR1159721 | MDR-TB | lineage2.2.1 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167264 | Pre-XDR-TB | lineage2.2 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1173174 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173377 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1180711 | MDR-TB | lineage2.2.1 | None | SRR1181101 | MDR-TB | lineage2.2.1 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR1180297 | Sensitive | lineage1.2.2.2 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782555 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR18002873 | Pre-XDR-TB | lineage4.4.2;lineage4.2.2;lineage2.2.1 | None | SRR3675468 | Sensitive | lineage4.9 | None | SRR21658391 | Other | lineage4.1.1.3 | None | ERR1199084 | Sensitive | lineage4.6.1.1 | ug | ERR1199090 | Sensitive | lineage4.6.1.1 | ug | SAMN02419536 | MDR-TB | lineage2.2.1 | by | ERR4814599 | Sensitive | lineage1.1.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR464760 | Sensitive | lineage4.4.1.1 | ch | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR1577252 | HR-TB | lineage2.2.1 | None | ERR4814565 | Sensitive | lineage4.4 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR1199071 | HR-TB | lineage4.6.1.1 | ug | ERR4814963 | Other | lineage4.1.2.1 | None | ERR4814961 | Sensitive | lineage4.1.2.1 | gb | ERR4816991 | Sensitive | lineage4.9 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | SAMN02567670 | Sensitive | lineage4.6.1.1 | None | ERR4817089 | HR-TB | lineage1.2.1.2.1 | gb | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR2124089 | MDR-TB | lineage2.2.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034791 | RR-TB | None | ERR2229636 | Sensitive | lineage4.9 | None | ERR1199081 | Sensitive | lineage4.6.1.1 | None | ERR1199076 | Sensitive | lineage4.6.1.1 | None | ERR1199091 | Sensitive | lineage4.6.1 | ug | ERR4816755 | Other | lineage4.1.1.3 | None | ERR1193643 | Sensitive | lineage4.3.4.2 | None | ERR4817297 | Other | lineage4.8 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819062 | Other | lineage3 | gb | ERR4817310 | Other | lineage4.9 | None | ERR2245344 | Sensitive | lineage3.1.1 | no | ERR2510746 | Other | lineage2.2.1 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | SRR8380864 | Other | lineage2.2.1.2 | None | ERR4817817 | Sensitive | lineage3 | None | ERR2510694 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510736 | Other | lineage4.1.2.1 | None | ERR2510733 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510811 | Sensitive | lineage4.1.2.1 | it | ERR2510807 | Other | lineage4.6 | None | ERR2510756 | HR-TB | lineage2.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4818051 | Other | La1.2.BCG | None | ERR4819030 | Other | lineage4.6.2.2 | gb | ERR1193644 | HR-TB | lineage4.3.3 | None | SRR1723829 | Sensitive | lineage2.2.1 | None | ERR1199087 | Sensitive | lineage4.6.1.1 | None | ERR4818912 | Other | lineage4.8 | gb | ERR245790 | Sensitive | None | ERR4818319 | Sensitive | lineage3.1.3 | gb | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR1199085 | Sensitive | lineage4.6.1.1 | ug | ERR4818545 | Other | lineage4.1.2 | gb | ERR4818575 | Sensitive | lineage4.1.2.1 | gb | ERR4818597 | Sensitive | lineage3 | gb | SRR5152904 | Other | lineage2.2.1 | None | ERR2513628 | Other | lineage4.1.2.1 | None | ERR1199075 | Sensitive | lineage4.6.1.1 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR1199080 | Sensitive | lineage4.6.1.1 | ug | ERR2515447 | Sensitive | lineage2.2.1 | None |
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