EBG00000313339 - n.2478T>C
Drug resistance types
56 Sensitive
4 RR-TB
4 HR-TB
26 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.9 | 35 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1 | 26 |
| lineage4.2.1 | 3 |
| lineage2.2.2 | 1 |
| La1.8.1 | 4 |
| lineage4.8 | 8 |
| La1.4 | 1 |
| lineage4.1.2 | 3 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.5 | 3 |
| La3;lineage4 | 1 |
| lineage4.3.3 | 9 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.2.2.2 | 2 |
| La1.7.1 | 1 |
| lineage4.3.4.2 | 2 |
| La1.2.BCG;lineage4.9 | 5 |
| La1.2.BCG | 3 |
| lineage4.1.1.3 | 2 |
| lineage2.1 | 1 |
| lineage4.8.1 | 2 |
| lineage1.2.2.2 | 4 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage6.2.3 | 1 |
| lineage4 | 1 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 5 |
| lineage4.1.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3 | 5 |
| lineage4.1.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1;lineage4 | 2 |
| La1.3 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 158 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR1208283 | Sensitive | lineage4.9 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4769505 | Other | lineage4.9 | None | ERR5162118 | Other | La1.8.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR16278292 | Other | La1.4 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR181708 | RR-TB | lineage1.1.2;lineage4 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867569 | Other | lineage4.9 | None | SRR16295830 | Other | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4450956 | Other | La1.7.1 | None | SRR1202516 | Other | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR1063855 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR1208731 | Sensitive | lineage4.9 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | SRR1019127 | Other | lineage4.9 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR4187921 | Sensitive | lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR1202544 | Other | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | ERR10796625 | Other | lineage4.4.1.1 | None | SRR11662417 | Pre-XDR-TB | lineage2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR5162133 | Sensitive | La1.8.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR1208775 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1208238 | Other | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR2179857 | Sensitive | lineage4 | None | SRR7131123 | Other | lineage4.8 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | SRR3675491 | Other | lineage4.7 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | ERR867575 | Other | lineage4.9 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR19576436 | Sensitive | lineage1.2.2.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1202419 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR1208334 | Other | lineage4.9 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR1208439 | Sensitive | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR21764250 | Other | lineage4.9 | None | SRR3675452 | Other | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR1915484 | Other | La1.2.BCG | None | SRR17856664 | Sensitive | lineage3 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR1915485 | Other | La1.2.BCG | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR867571 | Other | lineage4.9 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR7236108 | Other | La1.8.1 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR10219868 | Other | lineage4.1.2.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR4769546 | Other | La1.3 | None | SRR7069839 | Other | lineage4.8 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR1208436 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR1202421 | Other | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR4188255 | Sensitive | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR5341430 | Other | lineage3 | None | SRR1209048 | Other | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR5341460 | Other | lineage3 | None | ERR560448 | HR-TB | La1.2.BCG;lineage4.9 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR2693238 | Sensitive | lineage4.9 | None | SRR7069319 | Other | lineage4.5 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | SRR1208473 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
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