EBG00000313339 - n.2478T>C


Drug resistance types
106 Sensitive 27 RR-TB 14 HR-TB 40 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 153 Other
lineage Counts
lineage Count
lineage4 15
lineage4.2.1 2
lineage2.2.1 65
lineage4.9 52
La1.2 3
lineage4.8 9
lineage4.2.2.1 1
lineage4.1.2.1 13
lineage4.3.4.1 7
lineage1.1.1 1
lineage2.1 1
lineage1.1.3.2 3
lineage1.2.2.2 3
lineage4;lineage1.1.2 1
lineage3.1.2 2
lineage3 12
lineage4.9;lineage2.2 1
lineage4.4.1.1 10
lineage4.3.3 12
La1.8.1 25
lineage2.2.1.1 5
lineage3.1.1 5
lineage4.3.4 2
lineage2.2 4
lineage1.1.3 2
lineage1.1.3.1 1
lineage4.3.4.2 4
La1.7.1 4
lineage4.1.2 2
La1.4 2
lineage2.2.2 2
lineage4.1.1.3 6
8
lineage4.3.2.1 10
lineage4.9.1 1
lineage4.1.1 9
lineage1.2.1.2.1 2
lineage4.5 2
lineage4.3.4.2.1 5
lineage4.6.1.1 1
lineage4.7 3
lineage1.2.1.1 1
lineage3.1 1
lineage4.8.2 1
lineage4.1.1.3.1 2
lineage6.1.3 1
lineage1.2.2.1 1
lineage3.1.3 1
lineage1.1.2 1
lineage5.1.1 1
lineage4.3.2 1
lineage4.6.5 1
lineage4.2.1.1 1
lineage4.1.1.2 1
lineage4.4 1
lineage4;lineage2.2.1 1
lineage4.4.1 1
lineage4.3 1
lineage4.9;La1.8.1 1
lineage4;lineage2 1
lineage4.6.2.2 2
lineage6.3.1 1
lineage3.1.2.2 1
lineage4.1.4 1
lineage4;La1 1
La1.8 1
lineage4.9;La1.8 1
La1 1
La1.3 3
spoligotype Counts
spoligotype Count
None 350
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6197036 Other lineage4 None
ERR5864322 MDR-TB lineage4.2.1 None
ERR5865118 MDR-TB lineage2.2.1 None
ERR6197026 RR-TB lineage4.9 None
ERR6201802 Other La1.2 None
ERR8025347 Sensitive lineage4.9 None
ERR6866186 Sensitive lineage4.8 None
ERR736805 Sensitive lineage2.2.1 None
ERR7737918 MDR-TB lineage4.2.2.1 None
ERR6201843 Other La1.2 None
ERR6359064 Sensitive lineage4.9 None
ERR6865773 Sensitive lineage4.1.2.1 None
ERR6865839 Sensitive lineage4.3.4.1 None
ERR6866821 Sensitive lineage4.1.2.1 None
ERR718268 Sensitive lineage1.1.1 None
SRR11662417 Pre-XDR-TB lineage2.1 None
ERR7821182 Other lineage1.1.3.2 None
ERR9117827 Other lineage1.2.2.2 None
ERR181708 RR-TB lineage4;lineage1.1.2 None
ERR9117714 Other lineage3.1.2 None
ERR9117728 Other lineage3 None
SRR10315486 MDR-TB lineage2.2.1 None
SRR1011488 Other lineage2.2.1 None
SRR1019127 Other lineage4.9;lineage2.2 None
ERR9786498 Sensitive lineage4.1.2.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10851730 Other lineage4.3.3 None
SRR10315603 MDR-TB lineage4.8 None
SRR10315701 MDR-TB lineage4.3.3 None
SRR10482948 Other La1.8.1 None
SRR11349207 RR-TB lineage2.2.1 None
SRR10869268 Pre-XDR-TB lineage2.2.1.1 None
SRR10869074 Sensitive lineage2.2.1.1 None
SRR10869292 Pre-XDR-TB lineage2.2.1 None
SRR11294512 Other La1.8.1 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR12882669 RR-TB lineage3.1.1 None
SRR1173113 RR-TB lineage4.3.4 None
SRR1181136 Sensitive lineage2.2 None
SRR1181161 Other lineage4.9 None
SRR1184379 Other lineage4 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR11972212 MDR-TB lineage2.2.1.1 None
SRR11972420 MDR-TB lineage2.2.1 None
SRR1181250 Other lineage4.9 None
SRR1184383 Other lineage4.9 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR11972323 RR-TB lineage1.1.3.2 None
SRR12199387 Other lineage1.1.3 None
SRR12199409 Other lineage1.2.2.2 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR13423641 MDR-TB lineage2.2.1 None
SRR12931719 Other lineage4.3.4.2 None
SRR13199734 Other La1.2 None
SRR13423629 MDR-TB lineage2.2.1 None
SRR13199739 Other La1.7.1 None
SRR13199746 Other La1.7.1 None
SRR13423578 Other lineage2.2.1 None
SRR15368914 MDR-TB lineage2.2.1 None
SRR13583519 MDR-TB lineage4.1.2 None
SRR14782096 MDR-TB lineage2.2.1 None
SRR16295732 Other lineage2.2.1 None
SRR16278273 Other La1.4 None
SRR16278292 Other La1.4 None
SRR16295806 Other lineage2.2.1 None
SRR16295783 Other lineage2.2.1 None
SRR16295788 Other lineage2.2.1 None
SRR16295791 Other lineage2.2.1 None
SRR16295809 Other lineage2.2.1 None
SRR16295811 Other lineage2.2.1 None
SRR16295826 Other lineage2.2.1 None
SRR16295830 Other lineage2.2.1 None
SRR16295814 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR16295821 Other lineage2.2.1 None
SRR17856664 Sensitive lineage3 None
SRR1791909 Other La1.7.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002907 MDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002932 Pre-XDR-TB lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003042 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18911000 Sensitive lineage2.2.1 None
SRR18149430 Sensitive lineage4.1.1.3 None
SRR18149443 Sensitive lineage3 None
SRR18149455 Sensitive lineage4.1.2.1 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR18911138 Other lineage3 None
SRR19576436 Sensitive None
SRR2101684 Other lineage2.2.1.1 None
SRR2101628 Other lineage4.3.2.1 None
SRR2101681 Sensitive lineage4.8 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101685 Sensitive lineage4.9 None
SRR2101803 Sensitive lineage4.3.3 None
SRR2101774 Sensitive lineage2.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR2101816 Other lineage4.8 None
SRR21659035 Sensitive lineage4.1.2.1 None
SRR21658570 Sensitive lineage4.9 None
SRR21675949 Other lineage4.3.3 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR21676929 Other lineage1.2.1.2.1 None
SRR21714045 HR-TB lineage2.2.1 None
SRR21711124 Other lineage1.1.3 None
SRR21728339 Other lineage3 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
SRR21728710 Other lineage4.1.1.3 None
ERR176780 Sensitive lineage4.9 None
SRR21764250 Other lineage4.9 None
SRR21737226 Sensitive lineage4.5 None
ERR1665403 MDR-TB lineage2.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR1198988 Sensitive lineage4.6.1.1 None
ERR161184 Sensitive lineage4.3.4.2.1 None
ERR190339 Sensitive lineage4.3.4.2.1 None
SRR3675491 Other lineage4.7 None
SRR3675261 Other lineage1.2.1.1 None
ERR176450 Sensitive lineage4.1.1 None
SRR3675452 Other lineage3 None
ERR2179857 RR-TB lineage4 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR2229033 Other lineage4.8 None
ERR2041685 MDR-TB lineage2.2.1 None
ERR2027290 RR-TB lineage3.1 None
SRR3675552 RR-TB lineage4.9 None
ERR2179850 Sensitive lineage4 None
SRR5007165 MDR-TB lineage3 None
ERR2179695 Sensitive lineage4.5 None
ERR2228859 RR-TB lineage4 None
SRR5007155 HR-TB lineage4.1.2.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5341430 Other lineage3 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR5007170 RR-TB lineage4.9 None
SRR5341460 Other lineage3 None
ERR4819574 Sensitive lineage4.9 None
ERR4821137 Sensitive lineage4.3.4.1 None
ERR4819980 Other lineage4.1.2.1 None
ERR2693238 HR-TB lineage4.9 None
SRR6045496 Other lineage6.1.3 None
SRR6045516 Other lineage3.1.1 None
ERR4821373 HR-TB lineage4.1.2.1 None
ERR2660495 Sensitive lineage1.2.2.2 None
ERR2660505 Other lineage1.2.2.1 None
SRR6045621 Other lineage4.1.1.3 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045613 Other lineage3.1.3 None
SRR6045618 Other lineage3.1.2 None
SRR6045726 Other lineage3 None
SRR6045124 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6044841 Other lineage4.9 None
SRR6045909 Other lineage4.8 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6044958 Other lineage4.4.1.1 None
SRR6044925 Sensitive lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6046246 Other lineage3 None
ERR2851354 RR-TB lineage4.9 None
SRR6046275 Other lineage3.1.1 None
SRR6046359 Other lineage4.7 None
SRR6046343 Other lineage2.2.1 None
SRR6046541 Other lineage4.9 None
ERR2851359 Other lineage4.9 None
ERR2851371 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046739 Other lineage1.1.2 None
SRR6046743 Other lineage3 None
SRR6046766 Other lineage3.1.1 None
ERR502480 Other lineage5.1.1 None
SRR6511600 MDR-TB lineage4.3.4.2 None
ERR3148546 Other lineage4.3.2 None
SRR6046848 Other lineage4.6.5 None
SRR6397727 Other lineage4.2.1.1 None
SRR6982106 Sensitive lineage4.8 None
SRR6982088 Other lineage4.1.1.2 None
SRR6856094 Other lineage2.2.1 None
SRR6982102 Other lineage2.2.1 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6856087 Sensitive lineage4 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982138 Sensitive lineage4 None
SRR6982115 Sensitive lineage4 None
SRR6982414 Sensitive lineage4.9 None
SRR6982139 Sensitive lineage4.9 None
SRR6982140 Other lineage2.2 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6982272 Sensitive lineage4.9 None
SRR6982178 Sensitive lineage2.2 None
SRR6982195 RR-TB lineage4.4 None
SRR6982427 Sensitive lineage4.1.1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982275 Other lineage2.2.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR6982313 Sensitive lineage4.3.4.2.1 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6807688 Pre-XDR-TB lineage4.2.1 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR6982349 Sensitive lineage2.2.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6981912 Sensitive None
SRR6981918 Sensitive lineage4.4.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6982362 Other lineage4.3.2.1 None
SRR6981975 Sensitive lineage4.7 None
SRR6981962 Sensitive None
SRR6982371 Sensitive lineage4.1.1 None
SRR6982383 Other lineage4.3.2.1 None
SRR6981983 Sensitive lineage3.1.1 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6981981 Other lineage4.3.3 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6982011 Other lineage4.1.1 None
SRR6982014 Other lineage4.1.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6855915 Sensitive lineage4.9 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982035 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982057 Pre-XDR-TB lineage4.3 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6982070 RR-TB None
SRR6982405 Sensitive None
SRR6982066 Other lineage4.3.2.1 None
ERR5311080 Other La1.8.1 None
SRR6856032 Sensitive lineage2.2.1 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR5162118 Other La1.8.1 None
ERR5162133 Other La1.8.1 None
ERR5311076 Other La1.8.1 None
ERR5311088 Other La1.8.1 None
ERR5311086 Sensitive lineage4.9;La1.8.1 None
SRR6982510 Sensitive lineage4;lineage2 None
SRR6982558 Other lineage4.3.4.2 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR6982514 Sensitive lineage4.3.3 None
SRR7131123 Other lineage4.8 None
SRR9971243 Pre-XDR-TB lineage4.3.3 None
SRR7131004 Other lineage4.6.2.2 None
SRR9970983 MDR-TB lineage4.3.3 None
SRR7131122 Other lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7131257 Other lineage6.3.1 None
SRR7131169 Other lineage4.1.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR7516395 MDR-TB lineage2.2.1 None
SRR9971147 RR-TB lineage2.2.1 None
SRR8600217 Other La1.8.1 None
ERR036215 Other lineage4.8 None
SRR9971195 MDR-TB lineage4.3.3 None
ERR323061 Sensitive lineage4.9 None
ERR1063855 Other lineage4 None
ERR037501 Sensitive lineage4.3.4.2.1 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR10219868 Other lineage4.1.2.1 None
ERR1023527 RR-TB lineage4 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796578 Other lineage2.2.1 None
ERR10796595 Other lineage4.9 None
ERR10796592 Other lineage4 None
ERR10796594 Other lineage4.9 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796597 Other lineage4 None
ERR10796634 Other lineage4 None
ERR10796625 RR-TB lineage4.4.1.1 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796630 HR-TB None
ERR1274704 HR-TB lineage4.1.1 None
ERR3261359 Other lineage4.9 None
ERR3283028 Other None
ERR3261351 Other lineage4.9 None
ERR3261389 Other lineage4.9 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3283046 MDR-TB lineage4.9 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR3324329 HR-TB lineage4.1.1.3 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR4187604 RR-TB La1.8.1 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3324375 Other lineage1.1.3.2 None
ERR4178135 Sensitive lineage4.3.4.1 None
ERR4178216 Sensitive lineage4.1.2.1 None
ERR4187800 Other La1.8.1 None
ERR4187641 Other lineage4;La1 None
ERR4187720 Other La1.8.1 None
ERR4187993 Other La1.8.1 None
ERR4187819 Other La1.8 None
ERR4187916 Other La1.8.1 None
ERR4187921 Other None
ERR4188021 Other La1.8.1 None
ERR4187995 Other La1.8.1 None
ERR4188010 Other La1.8.1 None
ERR4188035 Other La1.8.1 None
ERR4188202 Other La1.8.1 None
ERR4188187 Other La1.8.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4188352 Other La1.8.1 None
ERR4188330 Other La1.8.1 None
ERR4188381 Other La1.8.1 None
ERR4188375 Sensitive lineage4.9 None
ERR4188372 RR-TB La1.8.1 None
ERR4450956 Other La1.7.1 None
ERR4188395 Other La1.8.1 None
ERR4188396 Sensitive La1 None
ERR4769424 Sensitive lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4627379 Other La1.8.1 None
ERR473278 Sensitive lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR4769412 Sensitive lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769462 Other La1.3 None
ERR4769470 Sensitive lineage4.9 None
ERR4769429 Other lineage4.9 None
ERR4769505 Other lineage4.9 None
ERR4769518 Sensitive lineage4.9 None
ERR4769507 Sensitive lineage4.9 None
ERR4769527 Sensitive lineage4.9 None
ERR4769525 Sensitive lineage4.9 None
ERR4769546 Other La1.3 None
ERR4769537 Sensitive lineage4.9 None
ERR4769549 Sensitive lineage4.9 None