EBG00000313325 - n.1175T>C
Drug resistance types
196 Sensitive
2 RR-TB
9 HR-TB
18 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 181 |
| La1.8.1 | 7 |
| lineage4.1.2.1 | 5 |
| lineage4.3.3 | 12 |
| lineage2.2.1 | 21 |
| lineage2.2.2 | 6 |
| lineage4.4.1.1 | 4 |
| lineage1.1.2 | 2 |
| lineage4.2.1 | 3 |
| lineage1.1.3.2 | 1 |
| lineage4.8 | 2 |
| lineage4.3.2.1 | 4 |
| lineage4.1.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.3.4.2 | 2 |
| lineage3 | 1 |
| lineage4.6.1.2 | 1 |
| La1.8.1;lineage4.9 | 4 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.1.2 | 7 |
| lineage4.3.4.2.1 | 4 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.8.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.8.1;lineage4 | 1 |
| lineage6.1.3 | 2 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.2.2.1;lineage4 | 1 |
| La1.6 | 2 |
| lineage6.2.3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.6.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 300 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1208422 | Other | lineage4.9 | None | SRR1208978 | Sensitive | lineage4.9 | None | SRR1209076 | Other | lineage4.9 | None | ERR4188035 | Other | La1.8.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | SRR14802194 | Sensitive | lineage4.3.3 | None | SRR1208613 | Sensitive | lineage4.9 | None | SRR1202516 | Other | lineage4.9 | None | SRR1208695 | Sensitive | lineage4.9 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR1208433 | Sensitive | lineage4.9 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR1208669 | Sensitive | lineage4.9 | None | ERR4188021 | Other | La1.8.1 | None | SRR1208668 | Other | lineage4.9 | None | SRR1208848 | Sensitive | lineage4.9 | None | SRR1202397 | Sensitive | lineage4.9 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR1202434 | Sensitive | lineage4.9 | None | SRR1208406 | Sensitive | lineage4.9 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208431 | Sensitive | lineage4.9 | None | SRR1208478 | Sensitive | lineage4.9 | None | SRR1208165 | Sensitive | lineage4.9 | None | SRR1208464 | Other | lineage4.9 | None | SRR1208447 | Sensitive | lineage4.9 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | SRR1208534 | Sensitive | lineage4.9 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR8773691 | HR-TB | lineage4.2.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR1208807 | Sensitive | lineage4.9 | None | SRR1209087 | Sensitive | lineage4.9 | None | ERR3039920 | Sensitive | lineage1.1.3.2 | None | SRR11342680 | Other | lineage4.8 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR1208757 | Other | lineage4.9 | None | SRR1202569 | Other | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR1202725 | Sensitive | lineage4.9 | None | SRR1208310 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1209021 | Sensitive | lineage4.9 | None | SRR12882374 | Sensitive | lineage3.1.1 | None | ERR4188381 | Other | La1.8.1 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR9786558 | Other | lineage4.3.4.2 | None | ERR10796559 | Other | lineage4.9 | None | SRR1208801 | Sensitive | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR6789621 | Other | lineage4.9 | None | ERR4800122 | HR-TB | lineage3 | None | ERR9029854 | Pre-XDR-TB | lineage4.3.3 | None | SRR1208477 | Sensitive | lineage4.9 | None | SRR1208979 | Other | lineage4.9 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | SRR1208573 | Sensitive | lineage4.9 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208555 | Sensitive | lineage4.9 | None | SRR1202605 | Sensitive | lineage4.9 | None | SRR1208577 | Other | lineage4.9 | None | SRR1208873 | Sensitive | lineage4.9 | None | ERR6359064 | Sensitive | lineage4.9 | None | SRR1208525 | Sensitive | lineage4.9 | None | SRR1208563 | Sensitive | lineage4.9 | None | SRR1202396 | Other | lineage4.9 | None | SRR1208690 | Other | lineage4.9 | None | SRR1208260 | Sensitive | lineage4.9 | None | SRR1208900 | Other | lineage4.9 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1208999 | Sensitive | lineage4.9 | None | SRR1208660 | Sensitive | lineage4.9 | None | SRR1208744 | Other | lineage4.9 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | SRR1208195 | Sensitive | lineage4.9 | None | SRR1208378 | Other | lineage4.9 | None | ERR4188395 | Sensitive | La1.8.1 | None | SRR1208874 | Sensitive | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR1208452 | Sensitive | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | ERR4828514 | HR-TB | lineage2.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR1208937 | Sensitive | lineage4.9 | None | SRR1208637 | Sensitive | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR1208956 | Sensitive | lineage4.9 | None | SRR1208686 | Sensitive | lineage4.9 | None | SRR1208506 | Sensitive | lineage4.9 | None | SRR1209029 | Sensitive | lineage4.9 | None | SRR1202381 | Sensitive | lineage4.9 | None | SRR1208574 | Sensitive | lineage4.9 | None | SRR1208449 | Sensitive | lineage4.9 | None | SRR1208792 | Other | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR1208298 | Sensitive | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR1208462 | Sensitive | lineage4.9 | None | SRR14802191 | Sensitive | lineage2.2.1 | None | SRR1209037 | Sensitive | lineage4.9 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR1208370 | Sensitive | lineage4.9 | None | ERR10796625 | Other | lineage4.4.1.1 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | SRR1202598 | Sensitive | lineage4.9 | None | SRR1208689 | Sensitive | lineage4.9 | None | SRR1209005 | Sensitive | lineage4.9 | None | SRR1208888 | Sensitive | lineage4.9 | None | SRR1202719 | Sensitive | lineage4.9 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR1208779 | Sensitive | lineage4.9 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR4188352 | Sensitive | La1.8.1 | None | ERR176489 | Sensitive | lineage4.3.4.2.1 | None | SRR1202537 | Other | lineage4.9 | None | SRR1208498 | Sensitive | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR1202405 | Sensitive | lineage4.9 | None | SRR1208761 | Other | lineage4.9 | None | SRR1208552 | Other | lineage4.9 | None | SRR1202451 | Sensitive | lineage4.9 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR1202415 | Sensitive | lineage4.9 | None | ERR1063888 | HR-TB | lineage1.1.2 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR1208468 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4187819 | Sensitive | La1.8.1;lineage4 | None | SRR1208824 | Other | lineage4.9 | None | SRR11871413 | XDR-TB | lineage2.2.1 | None | SRR1208236 | Other | lineage4.9 | None | SRR1208675 | Sensitive | lineage4.9 | None | SRR1208457 | Sensitive | lineage4.9 | None | SRR1208676 | Other | lineage4.9 | None | ERR1334032 | Other | lineage6.1.3 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | SRR1202509 | Sensitive | lineage4.9 | None | SRR1202555 | Sensitive | lineage4.9 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR1208946 | Other | lineage4.9 | None | SRR1202403 | Sensitive | lineage4.9 | None | SRR1208270 | Sensitive | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | ERR4799131 | HR-TB | lineage2.2.1 | in | ERR245795 | Sensitive | lineage3.1.1;lineage4.3.2.1 | None | SRR1208875 | Sensitive | lineage4.9 | None | SRR1208667 | Sensitive | lineage4.9 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR1208587 | Sensitive | lineage4.9 | None | SRR1208673 | Sensitive | lineage4.9 | None | SRR1208332 | Other | lineage4.9 | None | SRR1202741 | Sensitive | lineage4.9 | None | SRR1208802 | Sensitive | lineage4.9 | None | ERR6336794 | Sensitive | lineage1.2.1.2.1 | None | SRR1208803 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR5065352 | Sensitive | lineage2.2.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | ERR212112 | Sensitive | lineage1.2.2.1;lineage4 | None | SRR1208302 | Sensitive | lineage4.9 | None | SRR1208238 | Other | lineage4.9 | None | SRR1208475 | Sensitive | lineage4.9 | None | SRR1208461 | Sensitive | lineage4.9 | None | SRR1208456 | Sensitive | lineage4.9 | None | SRR1202548 | Sensitive | lineage4.9 | None | SRR1208604 | Sensitive | lineage4.9 | None | SRR1208174 | Other | lineage4.9 | None | SRR1208905 | Sensitive | lineage4.9 | None | SRR1208826 | Sensitive | lineage4.9 | None | SRR1202400 | Sensitive | lineage4.9 | None | SRR1202508 | Sensitive | lineage4.9 | None | SRR1208533 | Sensitive | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR10993953 | Other | La1.6 | None | SRR1208463 | Sensitive | lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR1202557 | Sensitive | lineage4.9 | None | SRR1208804 | Sensitive | lineage4.9 | None | SRR1208815 | Sensitive | lineage4.9 | None | SRR1208670 | Sensitive | lineage4.9 | None | SRR1202430 | Sensitive | lineage4.9 | None | SRR1208261 | Sensitive | lineage4.9 | None | SRR1208470 | Sensitive | lineage4.9 | None | ERR3273119 | MDR-TB | lineage2.2.1 | None | SRR1208524 | Sensitive | lineage4.9 | None | SRR1208642 | Sensitive | lineage4.9 | None | SRR1202662 | Sensitive | lineage4.9 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR1202611 | Sensitive | lineage4.9 | None | ERR4187921 | Sensitive | lineage4.9 | None | SRR1792378 | Other | La1.8.1 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | SRR1202622 | Sensitive | lineage4.9 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | ERR9787079 | Other | lineage6.1.3 | None | SRR1202718 | Sensitive | lineage4.9 | None | SRR1202507 | Other | lineage4.9 | None | SRR1202435 | Other | lineage4.9 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | SRR1208885 | Sensitive | lineage4.9 | None | SRR1202523 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR1208432 | Sensitive | lineage4.9 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1209041 | Sensitive | lineage4.9 | None | SRR1202401 | Sensitive | lineage4.9 | None | SRR1208194 | Other | lineage4.9 | None | SRR1208913 | Sensitive | lineage4.9 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR1208338 | Sensitive | lineage4.9 | None | SRR1208441 | Sensitive | lineage4.9 | None | SRR1208879 | Sensitive | lineage4.9 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1208465 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | SAMEA5569803 | Pre-XDR-TB | lineage4.3.3 | None | SRR1208551 | Other | lineage4.9 | None | SRR1209039 | Sensitive | lineage4.9 | None | SRR1208678 | Sensitive | lineage4.9 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR1202726 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | SRR1208317 | Sensitive | lineage4.9 | None | SRR1208906 | Other | lineage4.9 | None | SRR1208567 | Sensitive | lineage4.9 | None | SRR1202375 | Other | lineage4.9 | None | SRR10993957 | Other | La1.6 | None | SRR1208682 | Other | lineage4.9 | None | SRR1208693 | Sensitive | lineage4.9 | None | ERR4769537 | Sensitive | lineage4.9 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR1208325 | Sensitive | lineage4.9 | None | SRR1202613 | Other | lineage4.9 | None | SRR1208837 | Sensitive | lineage4.9 | None | SRR1208990 | Sensitive | lineage4.9 | None | SRR1208585 | Sensitive | lineage4.9 | None | SRR1202628 | Sensitive | lineage4.9 | None | SRR1202441 | Sensitive | lineage4.9 | None | SRR1208455 | Sensitive | lineage4.9 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | SRR1208749 | Sensitive | lineage4.9 | None | SRR1208688 | Sensitive | lineage4.9 | None | SRR1202425 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1208284 | Sensitive | lineage4.9 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | SRR1209050 | Other | lineage4.9 | None | SRR1208876 | Other | lineage4.9 | None | SRR1208783 | Other | lineage4.9 | None | SRR1208603 | Other | lineage4.9 | None | SRR1208584 | Sensitive | lineage4.9 | None | SRR1209003 | Sensitive | lineage4.9 | None | SRR1208446 | Sensitive | lineage4.9 | None | SRR1208499 | Other | lineage4.9 | None | SRR1208448 | Sensitive | lineage4.9 | None | ERR8773690 | HR-TB | lineage4.2.1 | None | SRR1208927 | Sensitive | lineage4.9 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR1208345 | Sensitive | lineage4.9 | None | SRR1208537 | Other | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1208710 | Sensitive | lineage4.9 | None | SRR1208450 | Sensitive | lineage4.9 | None | SRR1202452 | Sensitive | lineage4.9 | None | ERR1679639 | Other | lineage4.6.4 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR1208849 | Sensitive | lineage4.9 | None |
|---|
