EBG00000313325 - n.1346C>T


Drug resistance types
88 Sensitive 8 RR-TB 59 HR-TB 17 MDR-TB 32 Pre-XDR-TB 0 XDR-TB 96 Other
lineage Counts
lineage Count
lineage2.2.1.1;lineage4 1
lineage4.9 79
lineage2.2.2;lineage4 7
lineage2.2.1 45
lineage4.3.3 2
lineage2.2.1.1 6
lineage2.2;lineage4 2
lineage4.8 10
lineage3 10
lineage4.3.4.2.1 6
lineage2.2.1;lineage2.2.2 5
lineage2.2.2 28
lineage4.2.1 2
La1.8.2 3
lineage4.3.2 1
lineage3.1.1 2
lineage4.2;lineage4.9 1
lineage4.1.2 5
lineage1.1.3.2 2
lineage4.4.1.1 3
La1.8.1 7
La1.7.1 3
lineage4.2.1.1 2
La1.2 4
lineage4.4.2 5
lineage1.1.2 4
lineage4.9.1 4
lineage1.2.1.2.1 1
lineage2;lineage4.9 2
lineage3.1;lineage4.6.1.1 1
lineage4.3.2.1 1
lineage4.3.2.1;lineage4.9 1
lineage4.6.1.1 4
lineage3.1.1;lineage4.6.1.1 1
lineage2.2.1;lineage3 1
lineage4.7 1
lineage4.3.4.2 3
lineage4.5 5
lineage4.1.1.3 3
lineage4.6.1.2 2
lineage5.1.1 2
lineage4.3.2;lineage4.9 1
lineage2 1
lineage4.1.2.1 2
lineage2.2;lineage4.9 1
lineage4.1.1.2 1
lineage3.1.2.1 2
lineage2.2;lineage3 1
lineage3;lineage4.9 1
lineage4 4
lineage1.2.1.2 1
La1.2.BCG 2
lineage4.3.4.1 1
lineage1.1.1 1
lineage2.2.1;lineage4 2
lineage1.1.3 1
lineage1.1.1.1 1
spoligotype Counts
spoligotype Count
None 300
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR7443756 Sensitive lineage4.9 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
SRR6982194 Other lineage2.2.1 None
SRR5341469 HR-TB lineage4.9 None
SRR1048966 MDR-TB lineage2.2.1 None
ERR4132447 Other lineage4.3.3 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048992 HR-TB lineage2.2;lineage4 None
SRR5341387 Other lineage4.9 None
ERR2228873 Other lineage4.8 None
SRR1048981 HR-TB lineage3 None
ERR036225 Other lineage4.3.4.2.1 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
SRR13591410 Other lineage4.9 None
SRR1048886 HR-TB lineage2.2.2;lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR1166181 Sensitive lineage4.2.1 None
ERR6149876 Other La1.8.2 None
ERR773804 Sensitive lineage4.9 None
SRR13591376 Sensitive lineage4.3.2 None
SRR1013604 HR-TB lineage2.2.1 None
SRR7443724 Sensitive lineage4.9 None
SRR12882020 Other lineage3.1.1 None
ERR1034791 RR-TB lineage4.9 None
ERR2228888 Other lineage4.8 None
SAMN02360577 HR-TB lineage3 None
ERR736825 Sensitive lineage4.9 None
SRR1173705 Other lineage4.9 None
SRR1168955 Sensitive lineage4.2;lineage4.9 None
DRR184644 HR-TB lineage2.2.1 None
ERR970455 RR-TB lineage4.1.2 None
SRR7443739 Sensitive lineage4.9 None
SRR21728339 Other lineage3 None
SRR1162501 Other lineage2.2.1 None
ERR245790 Sensitive lineage4.3.4.2.1 None
ERR037529 Other lineage4.3.4.2.1 None
ERR4796817 Pre-XDR-TB lineage3 in
SAMN02360583 HR-TB lineage2.2.2 None
ERR400540 Sensitive lineage1.1.3.2 gb
SRR6153042 Other lineage4.4.1.1 None
SRR7443725 Sensitive lineage4.9 None
SRR7851307 Other La1.8.2 None
SRR1013601 HR-TB lineage2.2.1 None
ERR6362858 Pre-XDR-TB lineage2.2.2 None
SRR1048993 HR-TB lineage4.9 None
SRR1173508 Sensitive lineage4.9 None
SRR1173719 Other lineage4.9 None
SRR7443785 Sensitive lineage4.9 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
SRR1792140 Other La1.8.1 None
SRR1180252 Other lineage4.9 None
SRR6389899 Other lineage4.1.2 None
SRR7236253 Other La1.7.1 None
SRR1048994 HR-TB lineage4.9 None
ERR1034722 Other lineage4.9 None
SRR2101691 Other lineage2.2.1 None
ERR2503565 Sensitive lineage4.2.1.1 fi
ERR6198389 Other La1.2 None
SRR1013596 Sensitive lineage3 None
ERR2228941 Other lineage4.8 None
SRR1049005 MDR-TB lineage2.2.2 None
ERR4188072 Sensitive lineage4.9 None
ERR164004 Sensitive lineage4.9 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR1181161 Other lineage4.9 None
SRR1173865 Sensitive lineage4.9 None
ERR6201802 Other La1.2 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
SRR7443750 Sensitive lineage4.9 None
SRR1013583 Sensitive lineage2.2.2 None
SRR1173384 Other lineage4.9 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR7131160 Sensitive lineage3 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1013607 HR-TB lineage2.2.2 None
ERR1140785 Sensitive lineage1.1.2 None
SRR5526841 MDR-TB lineage2.2.1.1 None
SRR7443722 Sensitive lineage4.9 None
SRR1048998 HR-TB lineage2.2.1 None
SRR7443737 Sensitive lineage4.9 None
SRR1173025 Other lineage4.9 None
ERR176781 Sensitive lineage1.1.3.2 None
SRR1173269 Sensitive lineage4.9 None
SRR1013608 Sensitive lineage2.2.2 None
ERR1023527 Other lineage4.9.1 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
SRR7443734 Sensitive lineage4.9 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
SRR7444102 Sensitive lineage4.9 None
ERR972801 RR-TB lineage2.2.1.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR6140667 Other La1.8.2 None
SRR7443761 Sensitive lineage4.9 None
ERR4769424 Sensitive lineage4.9 None
ERR2229358 Other lineage4.8 None
SRR7645834 Other lineage2.2.1 None
SRR1013530 Other lineage4.9.1 None
SRR6855896 Other lineage4.3.4.2.1 None
ERR1034692 Other lineage1.2.1.2.1 None
SRR6397642 Other lineage4.4.1.1 None
ERR970453 RR-TB lineage4.1.2 None
SRR13199746 Other La1.7.1 None
SRR1048853 HR-TB lineage2;lineage4.9 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
SRR1173565 MDR-TB lineage3.1;lineage4.6.1.1 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SRR7443749 Sensitive lineage4.9 None
SRR7240448 Other La1.8.1 None
SRR2101628 Other lineage4.3.2.1 None
SRR7443723 Sensitive lineage4.9 None
SRR5341390 HR-TB lineage1.1.2 None
SRR7443731 Sensitive lineage4.9 None
SRR1062868 Sensitive lineage4.3.2.1;lineage4.9 None
SRR7444098 Sensitive lineage4.9 None
SRR1172808 Other lineage4.9 None
ERR987733 Other lineage4.6.1.1 None
SRR1181368 Other lineage4.9 None
SRR30182724 Sensitive lineage3 None
SRR11342646 HR-TB lineage3 None
SRR1173764 Sensitive lineage4.9 None
SRR7443747 Sensitive lineage4.9 None
SRR7444103 Sensitive lineage4.9 None
ERR2229336 Other lineage4.8 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1173293 Other lineage3.1.1;lineage4.6.1.1 None
SRR1173800 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR1173310 Other lineage3.1.1 None
ERR6201843 Other La1.2 None
SRR1791940 Other La1.8.1 None
ERR1144990 Other lineage4.8 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR6856094 Other lineage2.2.1 None
SRR7443768 Sensitive lineage4.9 None
SRR7443790 Sensitive lineage4.9 None
SRR1013602 HR-TB lineage2.2.1 None
SRR6152979 Other lineage4.7 None
SRR6981966 Other lineage2.2.1 None
ERR473311 Sensitive lineage4.9 None
SRR7755706 MDR-TB lineage4.2.1 None
SRR7444074 Sensitive lineage4.9 None
SRR7236216 Other La1.8.1 None
ERR2124091 Pre-XDR-TB lineage4.3.4.2 None
SRR5341423 Other lineage1.1.2 None
ERR5987219 Pre-XDR-TB lineage2.2.2 None
SRR1173416 Sensitive lineage4.9 None
SRR1013612 Sensitive lineage4.5 None
SRR19612366 Other lineage4.5 None
ERR2124088 Other lineage4.4.1.1 None
ERR2229780 Other lineage4.9 None
ERR970457 RR-TB lineage4.1.1.3 None
ERR323067 Sensitive lineage4.3.4.2.1 None
ERR036194 Other lineage4.6.1.2 None
SRR7443733 Sensitive lineage4.9 None
SAMN02360580 HR-TB lineage2.2.1 None
SRR1173421 Other lineage4.9 None
ERR1140774 Sensitive lineage5.1.1 None
SRR5341312 Pre-XDR-TB lineage2.2.1 None
SAMN02419540 Other lineage2.2.1 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1013532 Sensitive lineage4.3.2;lineage4.9 None
SRR1013553 MDR-TB lineage2.2.2 None
SRR1048983 HR-TB lineage2.2.1.1 None
SRR7645827 Other lineage4.2.1.1 None
SRR1173706 Other lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048885 HR-TB lineage2.2;lineage4 None
ERR6338288 Other La1.2 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR5087846 Other La1.8.1 None
ERR4769429 Other lineage4.9 None
SRR1049040 HR-TB lineage2 None
ERR5864889 MDR-TB lineage2.2.1 None
SRR1013613 Sensitive lineage2.2.1 None
SRR1048982 HR-TB lineage2.2.1.1 None
SRR7443752 Sensitive lineage4.9 None
SRR1062869 Sensitive lineage4.9.1 None
ERR1140783 Sensitive lineage2.2.2 None
SAMN02360585 HR-TB lineage4.5 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2.2 None
SRR13591377 Sensitive lineage4.1.1.3 None
ERR1140793 Sensitive lineage5.1.1 None
SRR6982494 Other lineage2.2.2 None
SRR7131185 Other lineage4.1.2.1 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR1013581 Pre-XDR-TB lineage2.2.1 None
ERR473340 Sensitive lineage1.1.2 None
ERR2228859 Other lineage4.8 None
SRR8073606 Other La1.8.1 None
SRR1048988 HR-TB lineage2.2.1 None
SRR1062864 Sensitive lineage4.9 None
ERR108444 Other lineage4.1.2 ru
SRR1173766 Sensitive lineage4.9 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
SRR1173344 Sensitive lineage4.6.1.1 None
SRR7443738 Sensitive lineage4.9 None
SRR6982088 Other lineage4.1.1.2 None
ERR473337 Other lineage4.1.2 None
ERR9786844 Other lineage4.3.4.2 None
SRR5341407 Pre-XDR-TB lineage3.1.2.1 None
SRR7443730 Sensitive lineage4.9 None
SRR1173380 Pre-XDR-TB lineage2.2;lineage3 None
SRR5341396 Other lineage3;lineage4.9 None
SRR7443769 Sensitive lineage4 None
SRR1173833 Other lineage4.9 None
ERR1140791 Sensitive lineage1.2.1.2 None
SRR1013633 MDR-TB lineage2.2.2 None
ERR5865343 MDR-TB lineage2.2.1 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR11972420 MDR-TB lineage2.2.1 None
SRR7443767 Sensitive lineage4.9 None
SRR7443732 Sensitive lineage4.9 None
SRR7443751 Sensitive lineage4.9 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SRR1048996 Sensitive lineage4.5 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR7236372 Other La1.8.1 None
SRR1048980 HR-TB lineage3 None
SRR1049004 HR-TB lineage2.2.2 None
SRR1173704 Sensitive lineage4.6.1.1 None
SRR1013609 Sensitive lineage4 None
SRR1013611 Sensitive lineage4.5 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1144744 HR-TB lineage2.2.1 None
ERR323057 Sensitive lineage4.9 None
SRR12882631 Other lineage3.1.2.1 None
SRR5341375 Other lineage4.9 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013634 MDR-TB lineage2.2.2 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SRR1013590 HR-TB lineage2.2.1 None
SRR7443757 Sensitive lineage4.9 None
ERR2229033 Other lineage4.8 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR2124090 MDR-TB lineage2.2.1 None
SRR1174277 HR-TB lineage2.2.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR7444072 Sensitive lineage4.9 None
ERR751414 MDR-TB lineage4 None
SRR1180982 Other lineage2.2.1 None
SRR7086716 HR-TB La1.2.BCG None
ERR3806453 Other lineage4.3.4.2 None
SRR6982400 Other lineage2.2.1 None
SRR10869241 Pre-XDR-TB lineage2.2.1 None
ERR176741 Other lineage4.9 None
SRR1196582 Other lineage4.9 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR21675949 Other lineage4.3.3 None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02567670 Sensitive lineage4.6.1.1 None
SRR5341425 Other lineage4.9 None
ERR970458 RR-TB lineage4.1.1.3 None
SAMN02567685 Pre-XDR-TB lineage2.2.1 None
ERR176470 Other lineage4.3.4.1 mw
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1173768 Sensitive lineage4.9 None
SRR7236239 Other La1.7.1 None
SRR6046152 Other lineage4.9 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1173139 Sensitive lineage4.9 None
SRR1173190 Sensitive lineage4.9 None
ERR751865 Other lineage1.1.1 None
ERR126611 Sensitive lineage4.9.1 None
ERR987704 HR-TB lineage4.6.1.2 None
ERR2229332 Other lineage4.8 None
ERR7801178 Other lineage4.3.4.2.1 None
SRR1173343 Pre-XDR-TB lineage2.2.1 None
SRR7086711 HR-TB La1.2.BCG None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR7443726 Sensitive lineage4.9 None
SRR1013603 HR-TB lineage2.2.1 None
ERR036215 Other lineage4.8 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048975 HR-TB lineage2.2.1 None
ERR037234 Sensitive lineage4.9 None
SRR21711124 Other lineage1.1.3 None
ERR2446433 Other lineage4.1.2.1 None
SRR1013610 Sensitive lineage4 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
ERR502942 Sensitive lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1183080 Other lineage4.9 None
SRR1013600 Sensitive lineage2.2.1.1 None
SRR5341417 HR-TB lineage3 None
SRR6045162 Sensitive lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
ERR736850 Sensitive lineage4.9 None
SRR1184383 Other lineage4.9 None
SRR1048968 HR-TB lineage2.2.1;lineage2.2.2 None