EBG00000313325 - n.837_838delTT
Drug resistance types
23 Sensitive
24 RR-TB
46 HR-TB
35 MDR-TB
14 Pre-XDR-TB
4 XDR-TB
442 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 58 |
| lineage1.2.1.2 | 2 |
| La1.8.1 | 2 |
| lineage4.7 | 15 |
| lineage2.2.1.1 | 5 |
| lineage4.2.2 | 5 |
| lineage1.2.1.2.1 | 9 |
| lineage4.8 | 50 |
| lineage4.1.2.1 | 70 |
| lineage3.1.3 | 1 |
| lineage4 | 6 |
| lineage2.2 | 4 |
| lineage1.2.2.2 | 7 |
| lineage4.4.2 | 1 |
| lineage1.1.2 | 20 |
| lineage4.3.4.2.1 | 5 |
| lineage4.3.4.2 | 4 |
| lineage4.1.1.3 | 16 |
| lineage3.1.2 | 9 |
| La1.6 | 2 |
| lineage4.9 | 11 |
| lineage4.6.2.2 | 16 |
| lineage4.4.1.1 | 12 |
| lineage5.1.4 | 1 |
| lineage4.5 | 9 |
| lineage4.3.3 | 30 |
| lineage3.1 | 4 |
| lineage4.1.1 | 9 |
| lineage1.1.3.1 | 6 |
| lineage2.2.1.2 | 2 |
| lineage3 | 61 |
| lineage4.2.1 | 6 |
| lineage4.4.1 | 1 |
| lineage4.1 | 4 |
| lineage4.3.2.1 | 5 |
| lineage4.3.4.1 | 7 |
| lineage4.2.2.2 | 15 |
| lineage4.1.1.3.1 | 8 |
| lineage4.2 | 2 |
| lineage1.1.3 | 3 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage4.3.1 | 1 |
| lineage4.6.3 | 1 |
| lineage6.2.3 | 1 |
| lineage4.1.2 | 6 |
| 7 | |
| lineage1 | 1 |
| lineage4.6 | 2 |
| lineage4.8.1 | 4 |
| lineage6 | 2 |
| lineage4.6.1.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.3.2 | 4 |
| lineage4.2.2.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1.1 | 4 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.3.2.1;lineage2.2.1 | 2 |
| lineage4.8.2 | 6 |
| lineage1.1.3.2 | 1 |
| La3 | 1 |
| lineage4.4 | 2 |
| lineage4.3.1.1 | 7 |
| lineage5 | 1 |
| lineage1.1.1.1 | 2 |
| lineage1.2.2.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage6.1.3 | 6 |
| lineage4.4.1.1.1 | 6 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 588 |
Geographic prevalence
Country level data for this variant is available for 184 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15368722 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003011 | Other | lineage2.2.1 | None | SRR16370233 | Other | lineage1.2.1.2 | None | SRR18002902 | Other | lineage2.2.1 | None | SRR18002929 | HR-TB | lineage2.2.1 | None | SRR18002934 | Other | lineage2.2.1 | None | SRR18002960 | XDR-TB | lineage2.2.1 | None | SRR18002972 | Other | lineage2.2.1 | None | SRR18002896 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003035 | Other | La1.8.1 | None | SRR19303964 | Other | lineage4.7 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR19224247 | Other | lineage1.2.1.2 | None | SRR20970048 | Other | lineage4.2.2 | None | SRR19304114 | Other | lineage1.2.1.2.1 | None | ERR4815130 | Other | lineage4.8 | None | SRR21239801 | Sensitive | lineage4.1.2.1 | None | SRR21239946 | Other | lineage4.1.2.1 | None | SRR21240103 | Other | lineage4.1.2.1 | None | SRR21595825 | Other | lineage1.2.1.2.1 | None | SRR21686114 | Other | lineage3.1.3 | None | SRR22048392 | Other | lineage4.8 | None | SRR21240077 | Other | lineage4.1.2.1 | None | SRR21595927 | HR-TB | lineage2.2.1 | None | SRR21677887 | HR-TB | lineage4 | None | ERR4815118 | Other | lineage2.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815172 | Other | lineage1.2.2.2 | None | ERR4815178 | Other | lineage4.8 | gb | ERR4815255 | Other | lineage4.4.2 | None | ERR4815197 | Other | lineage4 | None | ERR4815208 | Other | lineage2.2.1.1 | gb | ERR4815795 | Other | lineage1.1.2 | None | SRR3675485 | Other | lineage2.2.1 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815641 | Other | lineage4.3.4.2 | gb | ERR4815299 | Other | lineage4.8 | gb | ERR4815627 | Other | lineage4.1.1.3 | gb | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815306 | Other | lineage1.2.1.2.1 | gb | ERR4814355 | Other | La1.6 | gb | SRR3675491 | Other | lineage4.7 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814497 | HR-TB | lineage4.6.2.2 | None | ERR4815319 | Other | lineage4.1.1.3 | gb | ERR4814399 | Other | lineage4.6.2.2 | gb | ERR4814442 | Other | lineage4.4.1.1 | None | ERR4815680 | Other | lineage1.1.2 | gb | ERR4815684 | Other | lineage5.1.4 | gb | ERR4815771 | Other | lineage1.2.2.2 | gb | ERR4814438 | HR-TB | lineage4.1.2.1 | gb | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4814551 | Other | lineage4.1.2.1 | gb | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815419 | Other | lineage4.8 | None | ERR4815425 | Other | lineage4.5 | gb | ERR4814572 | Other | lineage4.3.3 | None | ERR4815427 | HR-TB | lineage3.1 | gb | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814703 | Other | lineage4.1.1 | gb | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR3675213 | Other | lineage4 | None | SRR3675220 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4814700 | Other | lineage4.3.3 | None | SRR3675225 | Other | lineage2.2.1.2 | None | ERR4815467 | Other | lineage3 | None | ERR4815476 | HR-TB | lineage2.2.1 | gb | ERR4814748 | Other | lineage4.8 | None | SRR3675252 | RR-TB | lineage1.1.2 | None | ERR4814761 | Other | lineage4.8 | gb | ERR4814783 | Other | lineage4.7 | None | ERR4814790 | Other | lineage4.2.1 | None | ERR4814801 | Other | lineage4.8 | gb | ERR4814804 | Other | lineage2.2.1 | None | ERR4815488 | HR-TB | lineage4.4.1 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675251 | Other | lineage4.3.3 | None | ERR3276005 | Other | lineage4.1.2.1 | nl | SRR3675256 | Other | lineage4.7 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4814877 | Other | lineage4.1.2.1 | gb | ERR4814954 | Other | lineage3.1 | gb | ERR4814938 | Other | lineage4.3.2.1 | None | ERR4815532 | Other | lineage3 | gb | ERR4814912 | HR-TB | lineage4.3.4.1 | None | SRR3675287 | Other | lineage3 | None | ERR4814932 | Other | lineage4.1.1 | None | ERR4815040 | Other | lineage4.2.2.2 | None | SRR3675361 | Other | lineage1.1.2 | gb | ERR4815551 | Other | lineage2.2.1 | None | ERR4815080 | Other | lineage4.1.2.1 | None | SRR3675452 | Other | lineage3 | None | ERR4815039 | Other | lineage4.1.1.3.1 | gb | ERR4815101 | Other | lineage3 | gb | ERR4815089 | HR-TB | lineage2.2.1 | gb | ERR4816944 | RR-TB | lineage2.2 | None | SRR1735639 | Sensitive | lineage4.5 | gb | ERR4816955 | Other | lineage4.3.3 | gb | ERR4815901 | Other | lineage2.2 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4815919 | Other | lineage4.8 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4815903 | Other | lineage4.1.2.1 | None | ERR4816969 | Other | lineage4.8 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4817508 | Other | lineage4.1.2.1 | gb | ERR4816971 | HR-TB | lineage4.3.4.1 | None | SRR3675512 | Other | lineage2.2.1 | None | ERR4816086 | Other | lineage4.2.2.2 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | ERR4816043 | Other | lineage4.2 | None | ERR2027248 | Other | lineage2.2.1 | None | ERR2027218 | Other | lineage4.6.2.2 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR4816089 | Other | lineage4.2.2.2 | gb | ERR4816093 | Other | lineage1.1.3 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR4816101 | Other | lineage4.1.2.1 | None | SRR3675538 | Other | lineage4.8 | None | ERR4817354 | Other | lineage3 | gb | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027285 | MDR-TB | lineage4.6.2.2 | None | ERR2027293 | Other | lineage4.3.4.2 | None | ERR2027277 | Other | lineage4.8 | None | ERR2027292 | HR-TB | lineage3 | None | ERR4816191 | Other | lineage3.1.2 | gb | ERR4816177 | Other | lineage4.1.2.1 | None | ERR4816232 | Other | lineage4 | None | ERR4817044 | Other | lineage4.1.1 | None | ERR4817478 | Other | lineage3 | None | ERR4817055 | Other | lineage4.1.2.1 | None | SRR3675562 | Other | lineage4.3.1 | None | SRR3675556 | Other | lineage3 | None | ERR4816353 | Other | lineage2.2.1 | gb | ERR4816258 | Other | lineage2.2.1.1 | gb | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4816314 | Other | lineage1.2.1.2.1 | gb | ERR4816350 | Other | lineage4.9 | gb | ERR4816397 | Other | lineage1.1.2 | None | ERR4817368 | Other | lineage4.6.3 | None | ERR4817475 | Other | lineage4.1.1.3 | gb | ERR4817086 | Other | lineage1.2.2.2 | gb | ERR4816403 | Other | lineage6.2.3 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR4817169 | Other | lineage4.7 | gb | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4817135 | Other | lineage4.1.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816677 | Other | lineage4.5 | None | ERR4816649 | Other | lineage3 | None | ERR4816681 | Other | lineage4.1.2.1 | gb | ERR4817202 | MDR-TB | lineage3.1.2 | gb | ERR4816690 | Other | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4816713 | Other | lineage1.1.2 | gb | ERR4816757 | Other | lineage2.2.1 | gb | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2513378 | Other | lineage3 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817278 | Other | lineage4.8 | gb | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816882 | Other | lineage4.8 | None | ERR4816883 | Other | lineage4.5 | None | ERR4817426 | Other | lineage4.1 | gb | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4817275 | Other | lineage4.2.2 | None | ERR4816876 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4816890 | HR-TB | lineage4.6.2.2 | None | ERR4815814 | Other | lineage3 | gb | ERR4816933 | Other | lineage4.1.1.3 | None | ERR4819062 | Other | lineage3 | gb | ERR4818691 | Other | lineage4.8 | None | ERR4818988 | Other | lineage1 | None | ERR4817795 | Other | lineage4.7 | gb | ERR4817822 | Other | lineage4.6 | None | ERR4817799 | Other | lineage3 | None | ERR2513392 | Other | lineage4.3.2.1 | gb | ERR4817874 | Other | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817926 | HR-TB | lineage4.6.2.2 | gb | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817958 | Other | lineage4.2.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2513054 | Other | lineage4.2.2.2 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR2513059 | Other | lineage4.1.1 | gb | ERR4818787 | MDR-TB | lineage6 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR4818752 | Other | lineage3 | None | ERR4818003 | Other | lineage1.2.1.2.1 | gb | ERR4818776 | Other | lineage2.2.1 | None | ERR4817987 | Other | lineage4.7 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | ERR4818801 | Other | lineage4.7 | gb | ERR2512471 | Sensitive | lineage4.1.1 | gb | ERR4819073 | Other | lineage4.1.2.1 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4818084 | Other | lineage3.1.1 | gb | ERR2513440 | Other | lineage4.1.1.3 | None | ERR2512494 | Other | lineage4.3.3 | gb | ERR4818846 | Other | lineage4.1.2.1 | gb | ERR2512544 | Other | lineage1.1.2 | gb | ERR4818249 | Other | lineage4.1.2.1 | gb | ERR2512599 | Other | lineage3 | gb | ERR4818257 | Other | lineage4.1.2 | gb | ERR4818874 | Other | lineage4.1.2.1 | gb | ERR4818261 | Other | lineage1.1.2 | None | ERR4818274 | Other | lineage4 | None | ERR2513467 | Other | lineage1.1.2 | None | ERR2512630 | Other | lineage4.8 | gb | ERR4818407 | Other | lineage4.3.2 | None | ERR2512716 | HR-TB | lineage4.6.2.2 | gb | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818471 | Other | lineage2.2.1 | None | ERR2509885 | RR-TB | lineage3 | None | ERR2512812 | HR-TB | lineage3 | gb | ERR4818570 | Other | lineage4.3.3 | None | ERR4818952 | Other | lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818580 | Other | lineage4.7 | None | ERR2513296 | Other | lineage4.1.2.1 | gb | SRR5007171 | Other | lineage2.2.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007174 | Other | lineage4.3.4.1 | None | SRR5007203 | Other | lineage2.2.1 | None | ERR4817547 | Other | lineage4.2.2.1 | None | ERR4817561 | Other | lineage4.7 | gb | SRR5007201 | HR-TB | lineage3 | None | SRR5007180 | Other | None | SRR5007182 | MDR-TB | lineage3 | None | ERR2513356 | Other | lineage4.5 | gb | ERR4817602 | Sensitive | lineage4.1.2.1 | None | ERR4818964 | Other | lineage1.2.1.2.1 | None | ERR4817645 | Other | lineage4.8 | None | ERR4819125 | Other | lineage2.2.1 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR2513364 | Sensitive | lineage4.1.2.1 | None | ERR4819082 | Other | lineage1.1.2 | gb | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819131 | Other | lineage4 | None | ERR4820231 | HR-TB | lineage4.6.1.2 | gb | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4819181 | Other | lineage3 | gb | ERR2513699 | Other | lineage4.1.2 | gb | ERR2513717 | Other | lineage2.2.1 | None | ERR2513700 | Other | lineage4.4.1.1 | gb | ERR4820717 | Other | lineage1.1.3 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4820247 | HR-TB | lineage4.9 | None | ERR4819183 | Other | lineage3 | None | ERR2513734 | Other | lineage4.1.2.1 | gb | ERR4820713 | HR-TB | lineage4.8 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820714 | Other | lineage3 | gb | ERR2513794 | Other | lineage4.8 | gb | ERR4819228 | Sensitive | lineage4.1.1.2 | None | ERR2513808 | Other | lineage4.1.2.1 | gb | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4819211 | Other | lineage4.7 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2513841 | Sensitive | lineage4.1.1.3.1 | gb | ERR4819262 | Other | lineage4.1.2.1 | None | ERR4819332 | Other | lineage3 | gb | ERR2513868 | Other | lineage3 | gb | ERR4819284 | Other | lineage4.3.4.1 | None | ERR2513886 | Other | lineage4.2.1.1 | gb | ERR4819293 | Other | lineage4.1.1 | gb | ERR4820297 | Other | lineage4.2.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR2513912 | Other | lineage4.5 | gb | ERR4820318 | Other | lineage4.2.2 | None | ERR4819347 | Other | lineage4.1.2.1 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4819379 | Sensitive | lineage4.1.2.1 | gb | ERR4819424 | Other | lineage4.8 | gb | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820719 | Other | lineage1.2.2.2 | None | ERR4820338 | Other | lineage4.2.2.2 | None | ERR2514174 | Other | lineage4.2.2.2 | gb | ERR4819456 | Other | lineage4.8 | None | ERR4820348 | Other | lineage4.1.2.1 | None | ERR4820364 | HR-TB | lineage4.2.1.1 | gb | ERR2515641 | Other | lineage2.2.1 | za | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820748 | Other | lineage3 | None | ERR2514315 | Other | lineage3 | gb | ERR4820404 | Other | lineage4.3.2 | None | ERR4819555 | Other | lineage4.8 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4819576 | Other | lineage4.2.2 | gb | ERR4819583 | Other | lineage1.1.2 | gb | ERR4819630 | Other | lineage4.8 | gb | ERR4820761 | Other | lineage4.3.4.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820424 | Other | La1.8.1 | gb | ERR2515823 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR4820771 | Other | lineage4.8 | None | ERR2514457 | Other | lineage4.1.1 | gb | ERR2514479 | Other | lineage4.8.2 | gb | ERR2514455 | Other | lineage3 | None | ERR4820471 | Other | lineage3 | gb | ERR4819727 | Other | lineage1.1.3.1 | None | ERR4819782 | Other | lineage1.2.1.2.1 | gb | ERR4819730 | Other | lineage4.8 | None | ERR4819764 | Sensitive | lineage4.3.3 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514609 | HR-TB | lineage3 | gb | ERR2514608 | Other | lineage1.1.3 | gb | ERR2514668 | Other | lineage4.8.1 | gb | ERR4820498 | HR-TB | lineage4.8 | gb | ERR2514673 | Other | lineage4.1.2.1 | gb | ERR4819867 | Other | lineage1.1.3.2 | None | ERR4819805 | Other | lineage4.1.2.1 | gb | ERR4819821 | Other | lineage4.8 | None | ERR4819830 | Other | lineage2.2.1 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2514702 | Other | lineage4.1.2.1 | gb | ERR4820543 | Other | La3 | None | ERR4820558 | Other | lineage4.8 | gb | ERR2514838 | Other | lineage4.8 | gb | ERR2514896 | Other | lineage3 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR2514962 | Other | lineage4.4 | None | ERR4819958 | Other | lineage3 | gb | ERR4819955 | Other | lineage3 | None | ERR4820614 | Other | lineage3.1.2 | None | ERR4820880 | Other | lineage4.2.2.2 | gb | ERR2514968 | Other | lineage4.3.3 | None | ERR4820001 | Other | lineage4.8 | gb | ERR4820033 | Other | lineage3 | gb | ERR4820833 | HR-TB | None | ERR4820624 | Other | lineage4.8 | None | ERR4820622 | Other | lineage4.3.4.2 | None | ERR4820132 | Other | lineage4.1.2 | None | ERR4820059 | Other | lineage3 | None | ERR4820060 | Other | lineage4.3.3 | None | ERR4820049 | Other | lineage4.8 | gb | ERR2515062 | Other | lineage2.2.1.2 | gb | ERR4820122 | Other | lineage4.3.1.1 | None | ERR4820666 | Other | lineage4.8 | gb | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820187 | Other | lineage4.3.3 | None | ERR4820679 | Other | lineage4.8 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR4820188 | Other | lineage3 | gb | ERR4820926 | Other | lineage4.8 | gb | ERR4821776 | Sensitive | lineage4.2.2.2 | None | ERR4821853 | Other | lineage4.3.3 | None | ERR4821011 | Other | lineage6 | None | ERR4821020 | Other | lineage4.1.1.3.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6046092 | HR-TB | lineage4.8 | gb | ERR4821085 | Other | lineage2.2.1 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4820967 | HR-TB | None | SRR6045420 | Other | lineage4.1.2.1 | gb | ERR4821054 | Other | lineage3 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4821849 | Other | lineage4.5 | gb | SRR6046090 | HR-TB | lineage4.6 | gb | SRR6045485 | Other | lineage4.9 | None | ERR4821120 | Other | lineage4.1.2.1 | gb | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4821932 | Other | lineage2.2.1 | None | ERR4821899 | Other | lineage4.1 | None | ERR4821907 | Other | lineage4.1.1.3 | gb | ERR4821940 | Other | lineage4.9 | None | ERR4821924 | HR-TB | lineage4.6.2.2 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821953 | Other | lineage4.7 | gb | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4822035 | Other | lineage4.8 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821995 | Other | lineage2.2.1 | gb | ERR4821325 | Other | lineage3 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4822104 | RR-TB | lineage3 | None | ERR4821561 | HR-TB | lineage4.6.2.2 | None | ERR4822105 | Other | lineage4.1 | None | ERR4822154 | Other | lineage4.1.2.1 | None | ERR4821538 | Other | lineage3 | None | ERR4821543 | Other | lineage4.3.2.1 | gb | ERR4822193 | Sensitive | lineage4.2.1 | None | ERR4821449 | Other | lineage1.2.2.1 | gb | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821477 | Other | lineage4.8 | None | ERR4821556 | HR-TB | lineage4.6.2.2 | gb | ERR4822200 | Other | lineage4.3.4.1 | gb | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821568 | Other | lineage4.3.4.2.1 | None | ERR4821650 | Other | lineage4.1.2.1 | None | ERR4821584 | Other | lineage4.8.2 | None | ERR4821595 | Other | lineage4.1.1.3 | None | ERR4821641 | Other | lineage3 | gb | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821719 | Other | lineage3 | gb | ERR4821773 | Other | La1.6 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045600 | Other | lineage3.1.2 | gb | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045726 | Other | lineage3 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045744 | Other | lineage3.1.2 | None | SRR5818610 | Other | lineage3 | None | SRR6045768 | Other | lineage4.1.2.1 | gb | SRR5818612 | Other | lineage4.2.2.2 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR5818662 | Sensitive | lineage4.2.2.2 | dj | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR5818644 | Sensitive | lineage4.2.2.2 | dj | SRR6045833 | Other | lineage3.1 | gb | SRR5818666 | Other | lineage3 | None | SRR6045846 | Other | lineage4.4.1.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045847 | Other | lineage4.3.3 | gb | SRR6045849 | Other | lineage4.4.1.1 | None | SRR6044817 | Other | lineage3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045899 | Other | lineage4.1.2.1 | gb | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR6044888 | Other | lineage4.1.1.3.1 | None | SRR6045925 | Other | lineage4.2 | None | SRR6045910 | Other | lineage3.1 | None | SRR6045920 | Other | lineage4.1.1 | gb | SRR6046173 | Other | lineage3 | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | SRR6045110 | Other | lineage3 | None | SRR6044916 | Other | lineage4.1.1 | None | SRR6044946 | Other | lineage4.1.2.1 | gb | SRR6044957 | Other | lineage4.8.2 | None | SRR6044993 | Other | lineage3 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6046016 | Other | lineage4.3.1.1 | gb | SRR6045159 | Other | lineage3.1.1 | None | SRR6046189 | Other | lineage4.8 | None | SRR6045163 | Other | lineage2.2.1 | None | SRR6045376 | HR-TB | lineage4.1.2.1 | gb | SRR6045308 | Other | lineage3.1.2.2 | None | SRR6045232 | Other | lineage4.1.1.3 | gb | SRR6045325 | Other | lineage4.8.1 | gb | SRR6046281 | Other | lineage4.9 | None | SRR6045396 | Other | lineage4.3.1.1 | None | SRR6046064 | Other | lineage3 | gb | SRR6046223 | Sensitive | lineage3 | gb | ERR4829285 | Other | lineage2.2.1 | None | ERR2843515 | MDR-TB | lineage2.2.1 | None | ERR4830509 | MDR-TB | lineage2.2.1 | None | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046384 | Other | lineage4.3.1.1 | gb | SRR6046457 | Other | lineage3 | gb | ERR4830479 | RR-TB | lineage1.2.2.1 | None | SRR6046528 | Other | lineage3.1.2.1 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6046460 | HR-TB | None | SRR6046634 | Other | lineage3 | gb | SRR6046534 | Other | lineage1.1.2 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046636 | Other | lineage4.3.1.1 | gb | SRR6046586 | Other | lineage4.1.1.3 | gb | SRR6046679 | Other | lineage3 | gb | SRR6046641 | Other | lineage4.8 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046710 | Other | lineage4.8.2 | None | SRR6046891 | Other | lineage4.7 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR6152949 | Other | lineage1.2.1.2.1 | ca | SRR6152666 | Sensitive | lineage4.7 | ca | ERR3148546 | Other | lineage4.3.2 | None | SRR6153221 | Other | lineage4.2.2 | ca | SRR6398097 | Other | lineage4.2.1.1 | ca | SRR6153170 | Other | lineage4.9 | ca | SRR6398013 | Other | lineage4.1.2 | ca | ERR4872152 | RR-TB | lineage4.6.2.2 | None | SRR6855774 | Other | lineage2.2.1 | None | SRR9971256 | MDR-TB | lineage2.2.1 | None | SRR6855867 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131031 | Other | lineage4.2.2.2 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR9971339 | MDR-TB | lineage4.3.3 | None | SRR7131183 | MDR-TB | lineage2.2.1 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | SRR9971059 | RR-TB | lineage2.2.1 | None | SRR9971153 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971052 | MDR-TB | lineage4.4.1.1 | None | SRR8651617 | Pre-XDR-TB | lineage4.5 | None | SRR8651662 | Pre-XDR-TB | lineage2.2.1 | None | ERR4192398 | Other | lineage6.1.3 | None | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | DRR034458 | Other | lineage2.2 | None | ERR10796630 | HR-TB | None | ERR10219868 | Other | lineage4.1.2.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR3957933 | Sensitive | lineage4.1.1.3 | None | ERR4024667 | Sensitive | lineage4.3.3 | None | ERR4192396 | Other | lineage6.1.3 | None | ERR4192417 | Other | lineage6.1.3 | None | ERR4192419 | Other | lineage6.1.3 | None | ERR8650527 | MDR-TB | lineage4.3.4.1 | None | ERR4192556 | Other | lineage6.1.3 | None | ERR6197040 | Other | lineage4.9 | None | ERR4192554 | Other | lineage6.1.3 | None | ERR4457826 | Sensitive | lineage4.3.3 | None | ERR4800095 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117696 | Other | lineage4.1.2.1 | None | ERR9027228 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117706 | Other | lineage4.4 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117780 | Other | lineage4.1.2.1 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117792 | Other | lineage1.1.2 | None | ERR9117823 | Other | lineage1.1.1 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9117837 | Other | lineage4.8.2 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR11342657 | HR-TB | lineage3 | None | SRR10315705 | MDR-TB | lineage4.4.1.1.1 | None | SRR10726045 | MDR-TB | lineage4.3.3 | None | SRR10315499 | MDR-TB | lineage2.2.1 | None | SRR10315587 | RR-TB | lineage4.1.1.3 | None | SRR10315630 | MDR-TB | lineage4.3.3 | None | SRR10315658 | RR-TB | lineage4.3.2.1 | None | SRR10315674 | MDR-TB | lineage2.2.1 | None | SRR10315745 | Sensitive | lineage2.2.1.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349150 | MDR-TB | lineage4.1.1.3 | None | SRR11349137 | RR-TB | lineage4.4.1.1.1 | None | SRR11349140 | MDR-TB | lineage4.1.1.3 | None | SRR11349148 | RR-TB | lineage2.2.1 | None | SRR11349138 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | SRR11349160 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349149 | RR-TB | lineage2.2.1 | None | SRR11349173 | RR-TB | lineage2.2.1 | None | SRR11349175 | Other | lineage2.2.1 | None | SRR11349185 | Other | lineage4.4.1.1.1 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR11349209 | MDR-TB | lineage4.1.2.1 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1140942 | Other | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR12006586 | Other | lineage1.1.3.1 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR13180370 | Other | lineage4.1.4 | None |
|---|
