EBG00000313325 - n.837_838delTT
Drug resistance types
5 Sensitive
6 RR-TB
10 HR-TB
19 MDR-TB
6 Pre-XDR-TB
3 XDR-TB
133 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 19 |
| lineage2.2.1.1 | 1 |
| lineage4.7 | 5 |
| lineage4.4.1.1.1 | 5 |
| lineage2.2.1 | 33 |
| lineage4.1.1.3.1 | 3 |
| lineage6.2.3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.2.2.2 | 5 |
| lineage3.1.2 | 3 |
| lineage4.8 | 11 |
| lineage4.3.3 | 11 |
| lineage4.9 | 5 |
| lineage4.6 | 1 |
| lineage4.1.2.1 | 19 |
| 1 | |
| lineage1.1.2 | 2 |
| lineage4.6.2.2 | 4 |
| lineage4.5 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.2.2.2 | 3 |
| La3 | 2 |
| lineage1.2.1.2.1 | 3 |
| lineage4.3.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.8.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.1 | 2 |
| lineage2.2.1.2 | 1 |
| lineage1.1.3 | 1 |
| lineage4.3.2 | 3 |
| lineage6.1.3 | 3 |
| lineage4.2.1 | 1 |
| lineage4.2.1.1;lineage4.8 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.3.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 182 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5007182 | MDR-TB | lineage3 | None | ERR2509885 | Other | lineage3 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR6152666 | Sensitive | lineage4.7 | ca | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | SRR5818610 | Other | lineage3 | None | SRR18002896 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044888 | Other | lineage4.1.1.3.1 | None | SRR6045726 | Other | lineage3 | None | ERR4816403 | Other | lineage6.2.3 | None | SRR7069880 | MDR-TB | lineage3 | None | SRR5007165 | Other | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR7069199 | Other | lineage4.8 | None | ERR4819332 | Other | lineage3 | gb | SRR10315630 | MDR-TB | lineage4.3.3 | None | SRR1173521 | Other | lineage4.9 | None | ERR4817822 | Other | lineage4.6 | None | SRR6044993 | Other | lineage3 | None | SRR21240103 | Other | lineage4.1.2.1 | None | ERR4816690 | Other | None | SRR11349185 | Other | lineage4.4.1.1.1 | None | ERR4815795 | Other | lineage1.1.2 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4814497 | HR-TB | lineage4.6.2.2 | None | SRR21239801 | Sensitive | lineage4.1.2.1 | None | SRR7069319 | Other | lineage4.5 | None | ERR4820187 | Other | lineage4.3.3 | None | ERR10796625 | Other | lineage4.4.1.1 | None | ERR4818274 | Other | lineage4 | None | ERR4821085 | Other | lineage2.2.1 | None | SRR6045110 | Other | lineage3 | None | ERR4820614 | Other | lineage3.1.2 | None | SRR1140942 | Other | lineage2.2.1;lineage4 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR5007203 | Other | lineage2.2.1 | None | SRR10321138 | Other | La3 | None | SRR19304114 | Other | lineage1.2.1.2.1 | None | SRR21239946 | Other | lineage4.1.2.1 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | ERR2512849 | Other | lineage1.1.3.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR3675452 | Other | lineage3 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR11342680 | Other | lineage4.8 | None | SRR7070399 | Other | lineage2.2.1 | None | SRR7069013 | Other | lineage4.8 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR6046612 | Other | lineage1.1.1.1 | None | ERR4815419 | Other | lineage4.8 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR7070022 | Other | lineage4.8 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4815255 | Other | lineage4.4.2 | None | SRR11349209 | MDR-TB | lineage4.1.2.1 | None | SRR10315705 | MDR-TB | lineage4.4.1.1.1 | None | ERR4815917 | Other | lineage2.2.1 | gb | SRR11342657 | HR-TB | lineage3 | None | ERR4872152 | RR-TB | lineage4.6.2.2 | None | SRR11349175 | Other | lineage2.2.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR1173113 | Other | lineage4.3;lineage4.9 | None | SRR18003011 | Other | lineage2.2.1 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR21686114 | Other | lineage3.1.3 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4820543 | Other | La3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR5818672 | Other | lineage1.2.2.2 | None | ERR4819830 | Other | lineage2.2.1 | None | DRR034458 | Other | lineage2.2.2 | None | ERR4800095 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002929 | HR-TB | lineage2.2.1 | None | SRR6152949 | Other | lineage1.2.1.2.1 | ca | SRR9971256 | MDR-TB | lineage2.2.1 | None | SRR3675485 | Other | lineage2.2.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | ERR4821849 | Other | lineage4.5 | gb | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR3675512 | Other | lineage2.2.1 | None | ERR2600609 | Other | lineage4.8 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | SRR11349138 | MDR-TB | lineage4.4.1.1.1 | None | SRR15368722 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | SRR6045768 | Sensitive | lineage4.1.2.1 | gb | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR7069430 | Other | lineage3.1.1 | None | SRR10315674 | MDR-TB | lineage2.2.1 | None | SRR21240077 | Other | lineage4.1.2.1 | None | ERR2515641 | Other | lineage2.2.1 | za | SRR3675225 | Other | lineage2.2.1.2 | None | SRR7069523 | Other | lineage1.1.3 | None | ERR10219868 | Other | lineage4.1.2.1 | None | SRR3675538 | Other | lineage4.8 | None | ERR2027218 | Other | lineage4.6.2.2 | None | SRR7070276 | Other | lineage3 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SRR19303964 | Other | lineage4.7 | None | SRR11349148 | RR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR9027228 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817508 | Other | lineage4.1.2.1 | gb | SRR7069754 | Other | lineage4.3.2 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4192556 | Other | lineage6.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | SRR7070185 | Other | lineage3 | None | SRR6045485 | Other | lineage4.9 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR7069018 | Other | lineage4.8 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | SRR6046291 | Other | lineage3 | None | ERR3276005 | Other | lineage4.1.2.1 | nl | SRR7070170 | Sensitive | lineage4.8 | None | SRR3675220 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | SRR7069675 | Other | lineage3 | None | SRR11349137 | RR-TB | lineage4.4.1.1.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR22048392 | Other | lineage4.8 | None | ERR2027292 | HR-TB | lineage3 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4192419 | Other | lineage6.1.3 | None | SRR6855774 | Other | lineage2.2.1 | None | SRR10315499 | MDR-TB | lineage2.2.1 | None | SRR3675252 | Other | lineage1.1.2 | None | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | SRR6398097 | Other | lineage4.2.1.1 | ca | ERR4820723 | Other | lineage4.4.1.1 | None | SRR6153170 | Other | lineage4.9 | ca | SRR18002960 | XDR-TB | lineage2.2.1 | None | SRR3675562 | Other | lineage4.3.1 | None | SRR20970048 | Other | lineage4.2.2 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | ERR2027293 | Other | lineage4.3.4.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR4819867 | Other | lineage1.1.3.2 | None | ERR4821245 | Other | lineage4.1.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR2027248 | Other | lineage2.2.1 | None | ERR4819630 | Other | lineage4.8 | gb | SRR3675256 | Other | lineage4.7 | None | SRR5818612 | Other | lineage4.2.2.2 | None | ERR9117780 | Sensitive | lineage4.1.2.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR12062547 | HR-TB | lineage2.2.1 | None | SRR7069074 | Other | lineage3 | None | SRR11349149 | RR-TB | lineage2.2.1 | None | ERR4815040 | Other | lineage4.2.2.2 | None | ERR4192398 | Other | lineage6.1.3 | None | SRR7068939 | Other | lineage4.2.2.2 | None | SRR6045325 | Other | lineage4.8.1 | gb | SRR7069981 | Other | lineage3 | None | SRR13180370 | Other | lineage4.1.4 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR1019127 | Other | lineage4.9 | None | SRR10726045 | MDR-TB | lineage4.3.3 | None | SRR7070383 | Other | lineage4.1.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR3675287 | Other | lineage3 | None | SRR3675491 | Other | lineage4.7 | None | SRR7070482 | Other | lineage4.1.2.1 | None |
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