EBG00000313339 - n.1017_1018delACinsG
Drug resistance types
10 Sensitive
10 RR-TB
4 HR-TB
22 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
93 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.2 | 2 |
| lineage3 | 16 |
| lineage4.1.1.1 | 5 |
| lineage4.8 | 12 |
| lineage2.2.1 | 24 |
| lineage4.1.2.1 | 5 |
| lineage6.1.3 | 1 |
| lineage4.2.2.2 | 4 |
| lineage4.9 | 20 |
| lineage4.7 | 3 |
| lineage4.1.3 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.1.1 | 4 |
| lineage1.1.2 | 3 |
| lineage2.2.2 | 5 |
| lineage4.3.4.1 | 4 |
| lineage4.3.1.1 | 2 |
| lineage4.1.2 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.3.4;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage3;lineage4 | 1 |
| lineage3.1.2.1 | 2 |
| lineage6.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 2 |
| lineage4.6 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046440 | Other | lineage3.1.2.2 | None | SRR7070553 | Other | lineage3 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867575 | Other | lineage4.9 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR10796634 | Other | lineage4.7 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | DRR188816 | Other | lineage4.2.2 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR3675527 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR7069030 | Other | lineage3 | None | ERR867544 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | ERR9117788 | Other | lineage3 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796582 | Other | lineage4.3.4.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6046064 | Other | lineage3 | gb | SRR3675509 | Other | lineage4.9 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR19304109 | Sensitive | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR7070461 | Other | lineage3 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR18002908 | Other | lineage2.2.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | ERR10796575 | Other | lineage4.3.4;lineage4.9 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796599 | Other | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR7070479 | Other | lineage4.1.2 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867573 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR10796571 | Other | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR7069255 | Other | lineage4.1.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044841 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | SRR7070329 | Other | lineage3 | None | SRR6046020 | Other | lineage3 | None | ERR10796596 | Other | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR7069137 | Other | lineage4.8 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18213726 | Other | lineage3 | None | ERR10796577 | Other | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR3675491 | Other | lineage4.7 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR867571 | Other | lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117676 | Sensitive | lineage4.2.2.2 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6046246 | Other | lineage3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7070320 | Other | lineage4.8 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046815 | Other | lineage3 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None |
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